Homework 4 questions Flashcards

1
Q

The lac operon encodes a polycistronic mRNA. What DNA or protein components is there multiple of in the operon

A

ribosomal binding sites

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2
Q

in conditions with high glucose AND high lactose, the lac operon will be … because …

A

mostly off because the presence of glucose leads to inhibition of LacY

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3
Q

what is not involved in regulating the trp operon

A

regulatory sRNA and transcriptional interference

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4
Q

what is involved with regulating the trp operon

A

abundance of charged tRNA (trp), a repressor protein that blocks transcription, transcriptional attenuation

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5
Q

what is the location of the attenuator region that controls the expression of the trp operon

A

it is between the transcription start site and the first structural gene

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6
Q

bacteria would most likely use … to make small gene expression changes in response to a single environmental stressor, and … to make large readjustments to gene expression in response to multiple simultaneous stressors

A

a transcriptional regulator and an alternative sigma factor

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7
Q

an RNA thermometer is used to control … in response to …

A

translation and temperature

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8
Q

what is not true about second messenger molecules

A

they are advantageous because they can act as biosynthetic precursors and regulators

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9
Q

what is true about second messengers

A

many are derivatives of nucleotides, they can regulate by binding to RNA and proteins, they can signal within cells to regulate multiple operons

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10
Q

for a cis-asRNA regulating by transcription interference, you would expect it to function normally if the asRNA was instead encoded in trans

A

False

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11
Q

a <3,000 nt RNA molecule that is transcribed from the non-template DNA strand of a protein-coding gene and regulates only that gene is classified as an…

A

asRNA

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12
Q

abundant diguanylate cyclases and very little phosphodiesterase enzymes are produced. what are the c-di-GMP concentrations and what does that promote

A

high and biofilm formation

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13
Q

what is EnvZ … that modifies OmpR which is a …

A

a dual function kinase and phosphatase and a response regulator

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14
Q

RpoS is produced … and kept at very low levels at other times due to …

A

in stationary phase and RNase III cleavage of mRNA and protein degradation

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15
Q

what describes the key difference between QS systems in gram-positive and gram-negative

A

the chemistry of the autoinducer requires different uptake mechanims

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16
Q

in a transcriptional fusion you find that the inserted gene is increased in high salt concentrations, what can you conclude

A

the target gene is transcriptionally activated by high salt

17
Q

what protects against restriction endonucleases and what protects against Cas endonucleases

A

methylation, and excluding PAM sites from the CRISPR array

18
Q

what is the natural cellular function of restriction endonucleases in bacteria

A

these enzymes cleave invading viral DNA at the recognition sequence