metabolic pathways Flashcards

(73 cards)

1
Q

an organisms metabolism transforms matter and energy

A

true

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2
Q

total chemical reactions of an organism

A

metabolism

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3
Q

begins with a specific molecule and ends with a producs and each step is catalyzed by a specific enzyme

A

metabolic pathway

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4
Q

releases energy by breaking down complex molecules into simpler compounds

A

catabolic pathways

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5
Q

examples of catabolic pathways

A

Hydrolysis
– Cellular respiration = breakdown of glucose in presence
of oxygen
– “downhill” rxn

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6
Q

consume energy to build
complex molecules from simpler ones

A

anabolic pathways

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7
Q

examples of anabolic pathways

A

Dehydration/synthesis rxn
* synthesis of protein from AA
* “uphill” rxn
“do u wanna build a snowman”

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8
Q

Chemical rxns occur when

A

One substance is combined with another
* Atoms are rearranged in molecules
* Or small molecules combine to form larger molecules

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9
Q

chemical reactions occur when

A

One substance is broken down into another substance
* Molecules are split into atoms or smaller molecules

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10
Q

Chemical bonds are broken and new bonds form , happpens in most chemical reactions

A

coupled reaction

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11
Q

when the foward and reverse reactions proceed at the same rate , and the quantities of reactants and products remain constant

A

chemical equillibrium

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12
Q

capacity to do work (or supply heat)

A

energy

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13
Q

amount of enrgy to do work

A

freee energy

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14
Q

stored potential, in position

A

potential energy

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15
Q

active in motion , motion, measured as temp

A

kinetic energy

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16
Q

kinetic energy associated w/random movement of atoms or molecules

A

thermal energy

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17
Q

potential E available for release in a chemical rxn

A

chemical energy

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18
Q

An object’s position determines its ability to store energy

A

potential energy / chemical energy

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19
Q

For electrons, farther away from a nucleus it is = more potential
energy it has
* Electrons in an outer shell (farther from the + charged nucleus)
have more potential energy than electrons in an inner shell

A

true

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20
Q

Principle of Conservation of E
– It cannot be created or destroyed, but it
can be transferred or transformed

A

first law of thermodynamics

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21
Q

Entropy always increases
– Chemical rxns result in products w/
* More disorder (entropy)
* Less usable energy

A

second law of thermodynamics

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22
Q

Physical and chemical processes proceed in the
direction that results in lower potential energy and
increased disorder

A

SPONTANEOUS

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23
Q

They proceed w/o any continuous external influence
– No added E is needeD

A

Chemical reaction is spontaneous

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24
Q

Spontaneity of a rxn is determined by two factors

A

amount of potential energy and the degree of order

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25
Products have less potential E than the reactants
. The amount of potential E
26
Products are less ordered (higher dis-order) than the reactants * Disorder = Entropy (∆S)
The degree of order
27
the potential E of the molecule (heat content)
Enthalpy
28
Energy that can do work when temp. and pressure are uniform, as in a living cell. Only processes with a -∆G = spontaneous Spontaneous processes can be harnessed to perform work
Gibbs Free-Energy Change (G)
29
Determines whether a rxn is spontaneous or requires added energy to proceed
Gibbs Free Energy Change (G)
30
G = H −TS
G = Gibbs free energy change * H = change in enthalpy – measure of chemical potential E * S = change in entropy – measure of disorder * T = temp in degrees Kelvin
31
G < 0 = spontaneous rxn; E released products have less potential e than reactants
exergonic rxn
32
G > 0 = rxn that requires E input to occur and is not spontaneous; E absorbed products have higher potential e than reactants
endergonic rxn
33
G = 0
rxn that is @equilibrium
34
a cell does 3 main kinds of work
chemical transport mechanical
35
chemical
energonic rxns
36
transport
molecules up their concetration gradient
37
mechanical
moving structures, usu by motor proteins
38
to do work, cells manage energy resources by energy coupling
use of an exergonic process to drive an endergonic one
39
* Most energy coupling in cells is mediated by
ATP
40
is the cell’s energy shuttle; cellular currency
atp
41
atp is composed of
ribose (a sugar), adenine (a nitrogenous base), and three phosphate groups
42
All 3 types of cellular work (mechanical, transport, and chemical) are powered by hydrolysis of
atp
43
The energy from exergonic rxn of ATP hydrolysis can be used to drive an endergonic rxn
true
44
When a protein is phosphorylated, exergonic phosphorylation rxn is paired with an endergonic rxn
Energetic coupling
45
ATP drives endergonic rxns by ______, transferring a phosphate group to some other molecule (reactant); transfer E
phosphorylation
46
How electron transfers are related to energy
Electrons can be transferred completely or simply shift their position in covalent bonds
47
Each electron transferred is usually accompanied
by a proton (H+)
48
Reduced molecule (one that gets reduced)
Gains a proton and has higher potential energy
49
Oxidized molecule (one that gets oxidized)
oses a proton and has lower potential energy
50
Reduction often “adds H’s
Oxidation often “removes H’s”
51
Nicotinamide adenine dinucleotide (NAD+) gets reduced to form NADH
true
52
NADH
Readily donates electrons to other molecules – Is called an electron carrier – Has reducing power
53
The reactant that an enzyme acts on is called the enzyme’s
substrate
54
The enzyme binds to its substrate =
enzyme-substrate complex
55
region on the enzyme where the substrate binds
Active site
56
Enzymes speed up metabolic reactions by lowering energy barriers
yes
57
speed up a rxns w/o being consumed by the rxn
catalyst
58
is a catalytic protein
enzyme
59
Enzymes do not affect change in free energy (∆G)
only speeds up rxns that would occur eventually
60
rxns occur when
Reactants have enough kinetic energy to reach the transition state – Kinetic energy of molecules is a function of their temp
61
How Enzymes Lower the EA Barrier
Enzymes catalyze rxns by lowering the energy of activation (EA) barrier
62
interactions betwn the enzyme and the substrate stabilize the transition state
Lower the activation E required for the rxn to proceed
63
The rate of an enzyme-catalyzed reaction depends on
[Substrate] – Enzyme’s intrinsic affinity for the substrate – Temp. – pH
64
Enzymes can be saturated
65
* The rate of a rxn is limited by the amount of:
– Substrate present – Enzyme available
66
All enzymes show this type of saturation kinetics
Active sites cannot accept substrates any faster
67
Enzymes are regulated by molecules that are not part of the enzyme itself
cofactors & coenzymes
68
Cofactors
norganic ions – i.e. metal ions (Zn2+, Mg2+, Fe2+) – Reversibly interact with enzymes
69
Coenzymes
are organic molecules – That interact with enzymes – i.e. electron carriers NADH or FADH2; vitamins
70
Competitive inhibitors
bind to the active site of an enzyme, competing with the substrate
71
bind to another part of an enzyme, causing the enzyme to change shape and making the active site less effective
Noncompetitive inhibitors
72
Some inhibitors are toxins, poisons, pesticides, and antibiotics
true
73
Regulation needed to prevent chemical CHAOS
Allosteric regulators can speed up or slow down enzyme activity