The Cytoskeleton Flashcards

1
Q

What is the cytoskeleton?

A

The skeleton of the cell

A cell needs its cytoskeleton to keep its shape and modify it in response to environmental cues

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2
Q

What is the structure of the cytoskeleton like?

A
It is a complex network made of 3 different polymers:
Microtubules
Intermediate filaments
Actin filaments 
They provide for:
Shaping of the cell
Intracellular movement of organelles 
Cell movement
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3
Q

What are the main functions of each network?

A
Microtubules:
Organelle positioning 
Intracellular transport 
Intermediate filaments:
Mechanical strength 
Actin filaments:
Cell shape 
Organelle shape 
Cell migration
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4
Q

Why is the cytoskeleton dynamic? What do accessory proteins do to support this?

A

The cytoskeleton is dynamic and this is facilitated by its organisation
Polymers are made of monomers
Monomers are very abundant and not covalently linked and this allows for easy movement around the cell
Accessory proteins regulate:
Site and rate of filament formation (nucleation)
Polymerisation/ depolymerization
Function

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5
Q

What is the structure of actin filaments like?

A

Twisted chain of units (monomers) of the protein actin (G-actin)
This chain constitutes the filamentous form (F-form)
Thinnest class of the cytoskeleton filaments (7nm)
Presents structural polarity
At the positive end, most of the monomers are added whereas at the minus end the addition of monomers is less favourable
Associated with a large number of actin-binding proteins (ABP)- variety of organisation and function
There are 3 isoforms of G-actin with different isoelectric points:
Alpha-actin found mainly in muscle cells
Beta and gamma-actin in non-muscle cells

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6
Q

What is actin polymerisation?

A

Actin filaments (F-actin) can grow by addition of actin monomers (G-actin) at either end
The length of the filament is determined by:
Concentration of G-actin
Presence of Actin Binding Proteins (ABPs)

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7
Q

How do ABPs work on G-actin compared to F-actin

A

ABP: Proteins binding to monomers
G-actin levels are controlled mainly by 2 ABPs:
Profilin- facilitates actin polymerisation
Thymosin beta4- prevents the addition of actin monomers to F-actin
ABP: Proteins binding to filaments
Actin bundling proteins:
Keep F-actin in parallel bundles ( as in the microvilli observed in epithelial cells)
Cross-linking proteins:
Maintain F-actin in a gel-like meshwork (as seen in the cell cortex, underneath the plasma membrane)
F-actin severing proteins:
break F-actin into smaller filaments
Motor proteins (myosin):
Transport of vesicles and/or organelles through actin filaments

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8
Q

What are the specific functions of the actin filaments

A

Skeletal muscle:
Arranged in a para-crystalline array integrated with different ABPs
Interaction with myosin motors allow muscle contraction
Non-muscle cells:
Cell cortex- form a thin sheath beneath the plasma membrane
Associated with myosin form a purse-string ring resulting in cleavage of mitotic cells
Cytokinesis- involvement of an actin-myosin ring
Cell migration (a multi-step process)

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9
Q

How does cell migration happen through actin filaments?

A

The cell pushes out protrusions at its front (lamellipodia and filopodia)
Occurs through actin polymerisation
These protrusions adhere to the surface
Integrins link the actin filaments to the extracellular matrix surrounding the cell
Cell contraction and retraction of the rear part of the cell
Interaction between actin filaments and myosin

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10
Q

What is the structure of the intermediate filaments like?

A

Toughest of the cytoskeletal filaments (resistant to detergents, high salt etc.)
Rope-like with many long strands twisted together and made up of different subunits
Intermediate size (8-12nm)
Forms a network:
Throughout the cytoplasm, joining up to cell-cell junctions (desmosomes)
Withstands mechanical stress when cells are stretched
And surrounding nucleus
Strengthens the nucleus envelope

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11
Q

What is the polymerisation of intermediate filaments like?

A
Each unit is made of:
N-terminal globular head
C-terminal globular tail
Central elongated rod-like domain
Units form stable dimers
Every 2 dimers forma tetramer
Tetramers bind to each other and twist to constitute a rope-like filament
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12
Q

What are the different types of intermediate filaments?

A

These categories are split according to the protein units it is made of and their localisation
Cytoplasmic:
Keratins (in epithelia)
Vimentin and vimentin-related (in connective tissue, muscle cells and neuroglial cells)
Neurofilaments (in nerve cells)
Nuclear:
Nuclear lamins (in all nucleated cells)

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13
Q

What are the intermediate filaments binding proteins (IFBP)?

A

Main linker of IF structures
IFBP stabilise and reinforce IF into 3D networks
Examples:
Filaggrin- binds keratin filaments into bundles
Synamin and Plectin- bond desmin and vimentin
Link IF to the other cytoskeleton compounds (i.e. actin and microtubules) as well as to cell-cell contact structures (desmosomes)
Plakins- keep the contact between desmosomes of epithelial cells

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14
Q

What is the function of the intermediate filaments in the cytoplasm?

A

In the cytoplasm they provide:
Tensile strength- this enables the cells to withstand mechanical stress (to stretch)
Structural support- by creating a deformable 3D structural framework and reinforcing cell shape and fix organelle localisation

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15
Q

What re the functions of the intermediate filaments in the nucleus?

A

Present in all nucleated eukaryotic cells
Form mesh rather than rope-like structure
Line in the inner face of the nuclear envelope to:
Strengthen it
Provide attachment sites for chromatin
Disassemble and reform at each cell division as nuclear envelope disintegrates i.e. very different from the stable cytoplasmic IFs
Process controlled by post-translational modifications (mainly phosphorylation and dephosphorylation)

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16
Q

What is the structure of microtubules like?

A

Hollow tubes made up of the protein tubulin
Relatively stiff and is the thicker of the filaments (25nm)
Each filament is polarised
It’s a dynamic structure
Assemble and disassemble in response to cell needs
Tubulin in cell is roughly 50/50 as free or in the filament
i.e. very different from the stable cytoplasmic intermediate filaments

17
Q

What happens during the polymerisation of microtubules?

A

Microtubule organising centre (MTOC) are specialised protein complexes from where assembly of tubulin units start
Centrosome ( in the perinuclear region) is the MTOC in most of the cells
Contains gamma-tubulin ring that initiates the microtubule growth
Heterodimers of alpha and beta tubulin constitute the microtubule
It is a polarised growth (i.e. there is an end that grows faster (+ve end)

18
Q

What are the functions of microtubules?

A

Intracellular transport
Act like railway tracks on which molecular motors run
Different motors for different cargos
Directionality of filaments is vital (each motor only moves in one direction)
Organises position of organelles
Hence provides polarisation of cells
Directionality of filaments id vital

19
Q

What are the two most prominent examples of cells relying on microtubules?

A

Rhythmic beating of cilia and flagella
Motile processes, with highly organised microtubule core
Core consists of 9 pairs of microtubules around 2 central microtubule (axoneme)
Bending of cilia and flagella is driven by the motor protein Dynein
The basal body at the base of the tubule controls the assembly of the axoneme
So the:
Cilia in the respiratory tract, sweeping mucus and debris from the lungs
Flagella on spermatozoa
are both examples of instances where microtubules are essential