Exam 2 Flashcards
The life of a B cell
- repertoire assemsbly
- negative selection
- positive selection
- searching for infection
- finding infection
- attacking infection
- first three happen in bone marrow, second three happen in secondary lymphoid tissues
Rearrangement of Ig genes markers successive stages of B cell differentiation
Heavy chain assembled first. Expressed with the Cµ chain (Cd not expressed until later)
k light chain genes rearrange next. If attempts to make k light chain are unsuccessful, l chains rearrange
IgM expressed on cell surface
Development is guided by stromal cells (fibroblasts, adipocytes, osteoblasts, endothelial cells) in bone marrow through cell-cell interactions and cytokines like IL-7
Ig gene rearrangement results in productive and nonproductive rearrangements in pro-B cells
D-J on both chromosomes rearranges (efficient)
V splicing to D/J occurs on one chromosome at a time
1/3 chance of maintaining the reading frame for each chromosomal rearrangement
Successful rearrangement is tested by ability to express the m heavy chain
The pre-B cell receptor monitors the quality of the Ig heavy chain
Second test: Rearranged heavy chain is interrogated for ability to assemble with light chain PRIOR to light chain expression
VpreB and l5 are made by pre-B cells and act as a light chain surrogate. They are conventional proteins (not made by gene rearrangement, not variable). Pre-B cell receptor is expressed in intracellular vesicles
If assembly of the pre-B-cell receptor is successful, signals through Igb turn off gene rearrangements at heavy chain locus and pro-B cell receives survival and proliferation signals
In the absence of functional pre-B-cell receptor, cell dies by apoptosis
Rearrangement of light chain genes in pre-B cells
Unlike at the heavy chain locus, multiple V to J recombinations can occur
Rearrangement occurs on one chromosome at a time beginning with the k locus
At each V-J recombination event, there is a 1/3 chance of success
Up to 5 attempts per chromosome possible (5 Jk segments)
Light chain rearrangement
- k gene rearrangement happens first, one chromosome at a time.
- if successful then cell expresses mu and k
- then lambda locus rearranges
- if successful cell expresses mu and lambda
- once it travels to the surface, rearrangement stops
- if no success, apoptosis
Expression of heavy and light chains during B cell development
- pro b cell
- HC rearrangement
- proliferation
- successful HC rearrangement pass the surrogacy test
- approximately 100 cells each cell expresses same HC
- LC rearrangement in each cell
- population of cells with same HC but different LC
Ig gene rearrangement generates random specificities – many will be directed against self Ag
- No reaction with self ag; immature b cell moves to the blood and expresses IgD and IgM
- reaction with self ag; immature b cells is retained in bone marrow
- multivalent self Ag in bone marrow (on stromal cells, hematopoeitic cells, plasma proteins)
- negative signal delivered to immature B cell by multivalen ag
Autoreactive receptors on immature B cells can be modified by receptor editing
- receptor editing only occurs on light chain genes
- self antigen ligates immature B cells IgM
- cell receives signal to maintain expression of RAG proteins
- immature B cell continues to rearrange light chains
- further rearrangement generates a new VJ and simultaneously removes the old one
- immature B cell makes a new light chain and thus an IgM with a different specificity
- if the new receptor is self reactive, light chain genes continue rearranging
- if the new receptor is not self reactive the b cell leaves the bone marrow
- if the cell runs out of V genes to try, the celldies
- this is called clonal deletion
Immature B cells reactive with monovalent self Ag are made nonresponsive to Ag
- IgM of immature B cell binds soluable univalent self antigen
- B cell is signaled to make IgD and to become unresponsive to ag
- enters the peripheral circulation but does not survive for long
- soluble proteins tend to be monovalent
- binding of monovalent self Ag in bone marrow to immature B cells induces anergy
B cell tolerance to self Ag
Three mechanisms operate on immature B cells to deviate away from self-reactive Ab:
- Successful receptor editing away from self-reactivity
- Death by apoptosis
- Induction of anergy
This is called central tolerance because it occurs in primary lymphoid organ
Some immature B cells leave bone marrow and encounter self Ag not found in bone marrow.
These cells become tolerant by induction of anergy or induction of apoptosis
This is called peripheral tolerance
Some B cells remain that are reactive to self Ab normally inaccessible to B cells (e.g., interior of cells)
Systemic lupus erythematosis: autoimmune disease in which patient makes Ab to DNA
Transition from immature to mature B cells requires entry into secondary lymphoid tissues
Enter lymph node from blood through the high endothelial venules (HEV)
In primary lymphoid follicle, they encounter follicular dendritic cells that provide final maturation signals (immature to mature B cell transition)
B cell retained if encounter with specific Ag occurs
If not, cell leaves via efferent lymphatic vessel
T cell development; general consideration
Same lymphoid precursor in bone marrow gives rise to B cells and T cells
T cell precursors leave bone marrow and travel to thymus. This is where TCR gene rearrangement occurs. CD4 and CD8 T cells are generated here. abTCR and gdTCR are generated here. T cells in thymus are called thymocytes
TCR gene rearrangement occurs in thymus
Positive selection enables survival of T cells with TCR reactivity to self MHC. Cells with no self MHC reactivity die
This is followed by negative selection, which induces death of T cells with TCR that are too strongly MHC reactive (mechanism to avoid autoimmunity)
After these selection events, mature T cells leave thymus to populate the periphery
Thymus slowly degenerates after one year
This phenomenon is called thymic involution
A long-lived repertoire of mature peripheral T cells established at birth. They may also be self renewing
Note this differs from B cells, which are continually differentiating from bone marrow precursors throughout the host lifetime
general course of t cell development
- Thymic cortex: double negative precursor
- thymic medualla; double positive cell
- become single postive and then exit to blood
cell death in thymus due to unsuccessful rearrangement of TCR
2% of thymocytes successfully rearrange their TCR. 98% undergo apoptosis
Apoptotic cells are phagocytosed and cleared by thymic macrophages
TCR rearrangements in DN thymocytes
- DN start to rearrange their B, y and d loci
- y and d genes rearrange and commit; assemble with CD3 on cell surface; leave and migrate to tissues, do not undergo positive selection in the thymys
- B chain gene rearrangement, pre TCR and arrangement stops and expression of CD4 and CD8; pre T cell rearrangement of a y a d
Structure of pre t cell receptor
Successful assembly of a functional pre-TCR is a checkpoint in T cell development
pTa is the functional equivalent of the surrogate light chain
Pre-TCR forms a superdimer with CD3 molecules. The pre-T cell receptor serves as both receptor and ligand, delivering a signal to stop b, g, d rearrangement and start making CD4 and CD8
Cell reaching this stage are called pre-T cells
TCR B locus rearrangements
-two attempts can be made to acheive a productive rearrangement
Two attempts because there are 2 D gene segments
Note: if rearrangement involves first splicing to Cb2, rescue of nonproductive event not possible because Db1, Jb1 and Cb1 has been spliced out!
Events immediately following successful TCR b chain rearrangement
RAG1 and RAG2 turned off – allelic exclusion at the b locus
Pre-T-cell undergoes proliferation creating a clone of cells expressing the same Vb chain
Proliferating cells express CD4 and CD8 (most thymocytes are DP)
After cessation of proliferation, RAG1 and RAG2 and associated enzymes re-expressed and a, g and d undergo rearrangement
Successful expression of a chain and b chain (and assembly in to TCR) marks the second checkpoint in T cell development
The result is a T cell expressing functional TCR and both CD4 and CD8. This cell can become either a class I-restricted CD8 T cells or a class II-restricted CD4 cell
The strange situation of the d-chain locus
-rearrangement of an a chain gene always elimates the linked d chain locus
Any Va to Ja rearrangement (productive or not) deletes the whole d-chain locus
So a cell committed to the ab lineage cannot aberrantly express a gdTCR simultaneously
Positive and negative selection of T cells
In the thymus a population of T cells co-expressing CD4 and CD8 with random ab TCR specificities are generated
TCR recognize peptide Ag and self MHC, so T cells with TCR that can recognize MHC must be selected for survival - positive selection
Of the positively selected T cells, those expressing specificity for MHC + self peptides must be eliminated to avoid autoimmunity – negative selection
Selection occurs in the thymus
Because of receptor editing at the Va locus, a pre-T cell can try out several TCR specificities in the positive selection screen
Positive selection
Thymic cortical epithelial cells express both MHC1 and MHC2, and therefore present self peptides on both
These cells interrogate newly formed T cell receptor (TCR) positive, DP T cells
Recognition of either MHC1 or MHC2 = survival. Progeny of the T cell are restricted by that particular MHC1 or MHC2
2% of DP cells survive this test
whatever it interacts with is what it becomes (MHC1=CD8, MHC2=CD4)
Negative selection
-eliminates strongly autoreactive T cells
Dendritic cells and macrophages in the thymus interact with DP cells through self MHC + self peptide
Occurs mostly at the cortical/medullary junction
When the interaction is too strong, cell receives a DEATH signal (apoptosis)
Negative selection is a mechanism of central tolerance in T cells
What about self antigens NOT found in the thymus?
Autoimmune regulator (AIRE)
Transcription factor in thymic medulla epithelial cells
Induces transcription of low amount of various tissue specific self antigens
These can be tested in combination with MHC and used to select against T cell autoreactivity
Another mechanism of self tolerance
Some people lack functional AIRE, resulting in autoimmune polyendocrinopathy-candidiasis ectodermal dystrophy (APECED). Wide spectrum autoimmune disease affecting several tissues
Regulatory T (Treg) cells – A distinct CD4 lineage
Treg recognize self MHC2 + self Ag
Suppress activation of autoreactive CD4 cells that escape negative selection in the thymus
Operate outside the thymus. A peripheral tolerance mechanism
Suppression involves direct cell-cell contact and cytokines but mechanism not well understood at present
Suppression of autoreactive T cells by Treg requires them to interact with the same APC
T cell mediated immunity
Three important phases to consider:
Activation of naïve T cell by Ag + MHC
Differentiation of activated T cell to an effector cell
Effector function of the T cell – how it fights infection
When DC takes up Ag
- transport it to secondary lymphoid organs to activate T cells
- DC take up ag in the skin and move to enter draining lymphatic vessel
- DC cells bearing ag enter the draining lymph node where they settle in T cell areas
Immature DC characteristics
- highly phagocytic
- low MHC expressiodn
- Low expression of costim molecules
- Chemokine receptor CCR 6 expression (response to MIP3alpha in tissue)
Mature DC characteristic
- low phagocytic activity
- high MHC expression
- high expression of costim molecules
- CCR7 expresion (respond to MIP3Beta in lymph node)
DC cell presentation to T cells
- receptor mediated endocytosis of bacteria, presentation via MHC2
- Macropinocytosis of bacteria or virus, MHC2
- Viral infection, MHC1
- Cross presentation of exogenous viral ag, MHC1
- Transfer of viral ag from infected DC to resident DC, MHC1
Naïve T cells encounter Ag-bearing DC in the lymph node
- T cells that do not recognize Ag/MHC leave via the lymph and continue recirculation
- T cells that recognize Ag/MHC on DC are retatined in the lymph node where they undergo activation and proliferation
- After T cell activation and acquisition of effector function, T cells leave lymph node and home to the site of infection
T cell: DC interaction
- T cell initially binds DC through low affinity LFA-1 ICAM 1 interactions
- Subsequent bind of T cell receptors sends signal to LFA1
- Conformational change in LFA1 increases affinity and prolongs cell-cell contact
- interaction of T cells with DC involves low affinity transient interaction followed by stable binding if TCR/MHC pep contact is established
The two signal model for T cell activation
- the combo of an antigen specific signal and a costim signal is required to activate a naive T cell
- Professional antigen-presenting cells express B7
- These include DC macs and B cells
Costimulation
Costimulatory molecules like B7 are only expressed on activated B cells, macrophages and most importantly DC
DC in tissue normally do not express B7
Activation of DC by infection stimulates B7 expression and therefore cells become licensed to deliver signal 2 for T cell activation
Infection factors causing DC activation:
- Microbial molecules recognized by TLR and other pattern recognition receptors
- Inflammatory cytokines (most important: TNF-a and IFN-g)
T cell activation
- TCR/MHC pep and CD28/B7
- causes activation, proliferation and aquisition of effector function
IL-2 drives early expansion of Ag-specific CD4 T cells
- activated T cells have high affinity T cell receptor
- naive t cells express low affinity IL2 receptor
- autocrine signaling because induces production of IL2 from the T cell
T cells that encounter Ag MHC without B7
- become anergic
- cell remains non responsive even if costim occurs later on
Why costim?
- T cell selction in the thymus is not 100%
- some autoreactive cells escape into periphery
- Once a t cell has been activated, does not need costim