Exam 3 Flashcards
epidemiology
studies the frequency and distribution of disease and health-related factors in human populations
two general goals of epidemiology
- describe the nature, cause, and extend of new or existing diseases in populations
- intervene to protect and improve health in populations
how does disease occur
the epidemiological triangle
factors of the epidemiological triangle
host
environment
etiological agent
-diagnosing, treating, and preventing disease requires understanding all relevant factors
environmental factors of the epidemiological triangle
source reservoir transmission vector climate
sources of pathogens
endogenous: from the host’s own body; microbes or exogenous source: external to the host
sources of infectious disease
animate: other humans or animals
inanimate: water, food, soil fomites
reservoir: natural environmental location in which the pathogen normally resides
vector: organism that spreads disease from one host to another
EX: mosquitoes, ticks, fleas, mites, or biting flies
four main transmission routes
airborne contact vehicle-inanimate vector-borne -also vertical transmission
healthcare-acquired infection (HAI)
an infection that a patient develops while receiving care in a healthcare setting
AKA nosocomial infections
public health strategies to target disease
education
increase herd immunity
quarantine
vector control
factors contributing to the increase of emerging diseases
population crowding poverty tropical climates deforestation urbanization vaccine hesitation
one health
goal of achieving optimal health outcomes recognizing the interconnection between people, animals, plants, and other shared environment
bioterrorism
intentional or threatened use of microbes (their products) to produce death of disease in humans, animals, and plants
pathogen
microbes that cause disease
true pathogen
does not require a weakened host to cause disease
never part of normal microbiota
opportunistic pathogens
agents of disease under certain circumstances
only cause disease when their host is weakened (weak immune system) or can be normal microbiota that enters a different body site
establishing normal microbiota
colonization during delivery and post-natally
adult microbiome established by ~3 years old
where do we find normal microbiota
skin
mouth/pharynx/upper respiratory tract
gastrointestinal tract (GI)
genitourinary tract (GU)
skin: normal microbiota and conditions
conditions: slightly acidic pH, high concentration of NaCl, dry areas; also moist areas (sometimes containing sebum)
common skin microbiota:
dry areas: staphylococcus species
oil glands: cutibacterium acnes
upper respiratory tract: normal microbiota
upper respiratory tract-nostrils, sinuses, pharynx, and oropharynx
-colonized by a diverse group of microbes including non-pathogenic viruses
closest to skin-resembles skin flora
nasal cavity-resembles mouth flora
oropharynx-resembles mouth flora
oral cavity/teeth: normal microbiota
anoxic environment (between teeth and gums)
-anaerobes predominate
teeth and buccal surface (gums)
-streptococcus species
small intestine normal microbiota: gastrointestinal tract
duodenum: contains a few organisms due to stomach acid
Jejunum: enterococcus, lactobacillus, corynebacterium, yeast
ileum: similar to that in colon
colon (large intestine): normal microbiota: gastrointestinal tract
colon
largest microbial population on body
anaerobes: bacteroides, clostridia, prevotella
facultative anaerobes: enterobacteriaceae
genitourinary tract: normal microbiota
kidneys, ureter, bladder: sterile
distal portions of urethra: colonized by skin/GI tract flora: S. epidermidis, enterococcus, and corynebacterium spp.
female genital tract: acid-tolerant lactobacillus predominate
holobionts
hosts and microbes live together and evolve together
disrupted microbiota
dysbiosis
metabolic syndrome of dysbiosis
associated with chronic low-level inflammation
linked to metabolic endotoxemia
cardiovascular disease of dysbiosis
risk factor: diet increased red meat and high fat foods
increased production of trimethylamine (TMA)
TMA is oxidized by liver to trimethylamine N-oxide–>associated with atherosclerosis
cancer of dysbiosis
infection may cause the host become cancerous (flavor proliferation)
or cancers may be linked to inflammatory state associated with dysbiosis
virulence
describes the degree of harm/disease that a pathogen causes
virulence factors
microbial products or characteristics that increase ability to cause disease
infections dose 50
ID50 # of pathogens that will infect 50% of inoculated hosts
lethal dose 50
LD50
dose that kills 50% of experimental animals within a specified period
types of virulence factors
adhesion colonization factors; adhesions
invasion factors; invasins
surviving/overcoming host defenses: evade or suppress immune factors
direct damage to host tissues: exotoxins, endotoxins
adherence
sticking to: mediated by special molecules called adhesions pili fimbriae membrane and capsular materials viral spikes
colonization
establishing permanence
a site of microbial replication on or within host
dose no necessarily result in tissue invasion or damage
invasion
depends of pathogen
invasins
mechanism of action
overcoming host defenses
most microbes are eliminated before they can cause disease due to immune system
strategies to evade host immune response
antigenic masking
antigenic mimicry
antigenic variation
antigenic masking
pathogenic may conceal antigenic features
coats itself with host molecules
antigenic mimicry
emulating host molecules
capsules can resemble host carbohydrates
antigenic variation
periodically altering the surface molecules prevents a rapid immune response causes include: -mutations in the genome -change in protein expression
strategies to suppress host immune response
interference of phagocytosis
pathogens suppress immune function by:
-directly targeting/invading immune system cells
-making proteases that break down host antibodies
-interfering with the molecular signaling that activities parts of the immune response
-form biofilms
endotoxins
endo=inside
part of gram negative cell wall
higher LD50=less toxic
outer membrane of gram negative bacteria only
Lipid A portion is embedded in outer membrane
lipid A triggers an excessive inflammatory response
-endotoxic shock or septic shock
exotoxins
secreted by pathogen
soluble proteins; heat-labile
secreted by live bacteria
hight toxicity; low LD50
toxigenic
microbes that make toxins
toxemia
toxins in the bloodstream
types of exotoxins
A-B toxins
super antigens
A-B toxins
A subunit (responsible for toxic effects) B subunit (binds to specific target cell)
superantigens
activate T helper cells non-specifically
increased pro-inflammatory cytokine
may lead to toxic shock and organ failure
first line defesnses
physical/mechanical barriers:
- skin
- epithelial cell layers: respiratory, GI tract, HU tract, eye
- mucous membranes
- fluids: mucus, tears, saliva, sweat, stomach acid
- mechanical: cilia, peristalsis
- normal microbiota
the physical/mechanical barriers of skin
keratinocyte: keratin, dead cells slightly acidic pH: sebum dry salt (perspiration) lysozyme: protects follicle, gland normal microbiota
second line defenses
chemical/molecular defenses
cellular defenses
second line chemical/molecular defenses
lysozyme lactoferrin lactoperoxidase complement cytokines
second line cellular defenses
lymphatic system
leukocytes
phagocytosis
inflammation
lysozyme
a second line chemical/molecular defense
hydrolyzes peptidoglycan
cervical mucus, prostatic fluid, tears
lactoferrin
a second line chemical/molecular defense
sequesters iron in plasma
lactoperoxidase
a second line chemical/molecular defense
create superoxide radicals
mucous membranes
the complement system
composed of >30 heat-labile serum proteins
circulate in inactive form
three major activities:
-stimulates inflammation
-forms membrane attack complex
-promotes phagocytosis through opsonization
complement activation contributes to opsonizatoin
process in which microbes are coated by serum components (opsonins)
complement proteins are the first opsonins
prompts phagocytosis
cytokine
second line defenses
soluble protein/glycoprotein released by one cell that acts as a signaling molecules
cytokine functional groups
chemokines
interleukins
interferons
chemokines
stimulate cell migration
interleukins
regulate cell growth and differentiation
interferons
nonspecific antiviral activity
lymphatic system second line defense
plasma-->interstitial fluid-->lymph primary lymphoid tissues: -lymphocyte maturation (B and T cells) -thymus and bone marrow secondary lymphoid tissues: -encapsulated: spleen, lymph nodes -diffuse: --mucosa-associated lymphoid tissue (MALT) ---peyers patches and tonsils ---skin associated lymphoid tissue (SALT)
phagocytosis second line defenses
endocytic process encloses large particles in vacuole; digestion
- opsonin-dependent: complement and/or antibody
- opsonin-independent
phagocytosis: opsonin independent pathogen recognition
phagocytosis
microbe associated molecular patters (MAMPs)
-conserved molecules seen in microbes; not host
phagocytes have pattern recognition receptors (PRRs) which recognize MAMPs
toll-like receptors are one of the four types of PRRs
phagocytosis: toll like receptors (TLRs)
PRRs that function as signaling receptors
recognize and bind unique MAMPs
found on macrophages and dendritic cells
-antigen-presenting cells
phagocytosis: intracellular digestion
phagolysosome
exocytosis
antigen-presenting cells
phagolysosome
phagocytosis: intracellular digestion
acidic pH
degradative enzymes
reactive oxygen species (ROS)
exocytosis
phagocytosis: intracellular digestion
debris is expelled
neutrophils
antigen-presenting cells
phagocytosis: intracellular digestion
macrophages and dendritic cells (and B cells)
debris is packed with MHC2 molecules; sent to cell membrane
phagocytes: second line defenses
neutrophils contain mili-lobed segmented nucleus
macrophages are an antigen-presenting cell
dendritic cells are an antigen-presenting cell