Immunology 2 Flashcards
What kind of cell is a T cell and where is it produced?
T cells are lymphocytes (derived from common lymphoid precursor) that are produced in the bone marrow
T cells for the most part migrate and mature in _________ and differentiate into cells with what function?
Migrate and mature in the thymus, and differentiate into cells that either kill target cells that bear their cognate peptide:MHC class I complex or supply help to other immune cells by cytokine production.
T or F: T cells only recognize peptide antigen.
T
T or F: T cells secrete immunoglobulin molecules.
F
What is the structure of T cell receptors (TCR)?
They’re disulfide-linked heterodimers that consist of either an alpha and beta chain or a gamma and delta chain.
What TCR do most T cells have?
Alpha/beta
The variable domain is located near the ________ end of a TCR chain, and the constant domain is located near the _________ end.
Amino-terminal: variable domain
Carboxyterminal: constant domain
What is located at the extreme end of the carboxyterminal region of each chain in a TCR? What function does this serve?
A hinge-like region, followed by a transmembrane region and a short cytoplasmic tail. This region of the TCR anchors it into the T cell membrane and allows molecule flexibility
What does the TCR resemble structurally and functionally?
A membrane-bound antibody Fab fragment
T or F: Somatic recombination is used to construct the variable regions of the TCR complex.
T
Gamma/delta T cells are found primarily where?
Mucosal epithelium
T or F: Both alpha/beta and gamma/delta T cells are restricted to peptide antigens presented in context with MHC proteins.
F: Alpha/beta T cells are restricted, but gamma/delta T cells are not MHC restricted in their recognition of antigen
Gamma/delta T cells primarily recognize _______.
Non-protein antigenic determinants (lipid antigens, carb antigens)
T or F: Gamma/delta T cells mature extrathymically.
T
T or F: Mature alpha/beta T cells can express CD4, CD8, or both.
F: Can express either but not both
What is the signal transduction unit for the T cell receptor?
CD3
How do ITAMs (immunoreceptor tyrosine-based activation motifs) initiate a signaling cascade?
ITAMs associate with protein tyrosine kinases, which phosphorylate Tyr residues in the ITAMs. Enzymes then bind to the phosphorylated Tyr residues and become activated. This initiates a signaling cascade.
CD4 binds weakly to ____ on the surface of antigen-presenting cells.
MHC class II molecules
What’s the function of CD4+ T cells?
- Produce cytokines and provide help to B cells
- Upregulate the cells of the innate immune system
What is the basic structure of CD4?
Single chain protein with an extended structure
What is the basic structure of CD8?
Hereodimer formed by an alpha and beta chain connected by a disulfide bond
CD8 binds weakly to _______ on the surface of antigen presenting cells or target cells.
MHC class I molecules
What is the function of CD8+ T cells?
Kill cells that are presenting their cognate peptide antigen via MHC class I
What comprises the CD3 complex?
1 CD3 gamma chain, 1 CD3 delta chain, 2 CD3 epsilon chains, and 1 zeta homodimer
Where are ITAMs?
On the cytoplasmic tails of CD3 molecules
What functions can accessory molecules perform?
- Activation of T cell
- Tighter interaction of T cell and APC
- Killing of a target cell
What is CD45/what does it do?
AKA common leukocyte antigen. It’s a protein tyrosine phosphatase accessory molecule that is involved in T cell activation.
What does CD28/CTLA-4 do?
Binds to the B7 molecule on antigen processing cells, which delivers a costimulation signal to the T cell (this signal is required for T cell activation!)
What does CD5 do?
When it binds its ligand on B cells it promotes activation of T cells
What does Fas ligand (FasL) do?
Binds to Fas expressed on the surface of target cells, initiating Fas-mediated apoptosis
What functions do adhesion cells provide?
They primarily strengthen the interaction between a T cell and APCs or target cells, but they may also promote activation of T cells
What does lymphocyte function antigen (LFA-1) do?
It interacts with intracellular adhesion molecules (ICAM-1, ICAM-2, and ICAM-3) on target cells.
What does CD2 do?
Binds to LFA-3 on target cells and promotes cell-to-cell adhesion and T cell activation
What do very late antigens (VLAs) do?
They’re expressed on activated cells later in the response, and they bind to fibronectin on target cells to enhance the interaction between the T cell and the target cell
What is the function of lymphokine receptors?
They function to activate protein kinase cascades that deliver signals to the nucleus of the T cell
Each thymus lobule is separated into ______ and ______.
A cortex and medulla
What cells primarily populate the cortex of the thymus?
Thymocytes and cortical epithelial cells (CE cells express MHC class I and II antigens)
T or F: The cortex of the thymus is heavily populated with macrophages and bone marrow derived dendritic cells.
F: there are very few of these
What cells populate the medulla of the thymus?
Medullary epithelial cells, dendritic cells, and macrophages
T or F: Bone marrow derived macrophages and dendritic cells in the medulla of the thymus express class I and II MHC antigens.
T
When is the human thymus fully developed?
At birth
When is the rate of T cell production in the thymus the greatest?
Before puberty
T or F: Once the T cell repertoire has formed, new T cells are required to sustain T cell mediated immunity.
F
Where does massive proliferation of thymocytes occur?
In the cortex of the thymus
Where does thymocyte maturation occur?
In the medulla of the thymus
Where does positive selection for T cells with TCR that can bind to self-MHC occur?
In the cortex of the thymus; non-binders undergo apoptosis
Where does negative selection for T cells with specificity for self occur?
In the medulla of the thymus
What are tangible body macrophages?
Macrophages that have a unique staining pattern due to the chromatin of phagocytosed thymocytes that underwent apoptosis
What surface markers do thymocytes entering the thymic cortex have?
CD4-CD8- (double negative)
When do thymocytes become double positive?
Shortly after entering the thymic cortex from the bone marrow
T or F: Double positive thymocytes rapidly divide.
True dat.
What do TCRs on developing thymocytes need to continue development?
Survival signals or else they’ll die :(
Double positive cells (CD4+CD8+) that survive positive selection differentiate into ______ cells.
Single positive T cells (CD4+CD8- or CD4-CD8+)
When does a thymocyte become CD4+CD8-?
When the TCR binds to MHC class II
When does a thymocyte become CD4-CD8+?
When the TCR binds to MHC class I
Why is the positive selection step in the thymus important?
Because the function of mature T cells depends on their ability to bind to either MHC class I or MHC class II molecules. If the TCR has no MHC affinity, no sampling of T cell receptor complexes for cognate peptide antigen will be possible
Where does selection for single positive cells take place?
At the cortico-medullary junction of the thymus
What cells are responsible for negative selection of self-reactive T cells?
Thymic medullary antigen-presenting cells
What are autoimmune regulators (AIREs)?
Transcription factors that cause the expression of several hundred host tissue-specific proteins by epithelial cells in the medulla. When they’re taken up by APCs, they can increase the efficiency of negative selection in the medulla.
Patients that lack functional ________ typically present with autoimmune polyglandular syndrome type I or APECED.
AIRE (autoimmune regulator)
How is the alpha chain coding region of the variable region of the TCR produced?
- VJ junction is formed
- Transcription
- VJ joins C region
- Translation
How is the beta chain coding region of the variable region of the TCR produced?
- DJ junction is formed
- V segment joins DJ to form VDJ junction
- Transcription
- VDJ joins C region
- Translation
Rearrangement of the alpha TCR chain is analogous to _____.
Rearrangement of light chain Ig genes
Rearrangement of the beta TCR chain is analogous to ______.
Rearrangement of heavy chain Ig genes
In TCR gene rearrangement, which chain genes are the first to rearrange?
Beta, gamma, and delta
Thymocytes that bind best to MHC class I molecules will up-regulate (CD4/CD8) expression and down-regulate (CD4/CD8) expression.
Upregulate CD8
Downregulate CD4
Thymocytes that bind best to MHC class I molecules will up-regulate (CD4/CD8) expression and down-regulate (CD4/CD8) expression.
Upregulate CD4
Downregulate CD8
What is the organization of the TCR alpha chain locus?
[LV x 70-80] [J x 61] [C]
What is the organization of the TCR beta chain locus?
[LV x 52] [D1] [J1 x 6] [C1] [D2] [J2 x 7] [C2]
T or F: Alpha chain gene rearrangement happens after beta chain gene rearrangement.
T
What can surface phenotypes of T cell tumors tell you?
When/where a neoplastic event takes place
What is the characteristic cell surface marker of stem cells? Where is it?
CD34
Bone Marrow
What are the characteristic cell surface markers of lymphoid progenitor cells? Where are they and what disease is associated with them?
CD10, CD19, CD20
Thymus
Common acute lymphoblastic leukemia
What is the characteristic cell surface marker of thymic stromal cells or thymic epithelial cells? Where is it and what disease is associated with it?
Cytokeratins
Thymus
Thymoma
What is the characteristic cell surface marker of thymocytes? Where is it and what disease is associated with it?
CD1
Thymus
Acute lymphoblastic leukemia
What are the characteristic cell surface markers of T cells? Where are they and what diseases are associated with them?
CD3/TCR, CD4, CD8 Located in the periphery Sezary syndrome Adult T cell leukemia Mycosis fungoides Chronic lymphocyte leukemia T prolymphocytic leukemia
What signals are required for activation of naive T cells?
- TCR recognition of cognate peptide:MHC complex
2. Co-stimulation signal (B7 binding to CD28)
Naive T cells are activated by _______.
Professional antigen-presenting cells bearing the T cell’s cognate peptide bound to either MHC class I or MHC class II
What cells express B7 molecules?
APCs
How do naive T cells enter the lymphoid organs and what mediates this procesS?
By crossing the walls of high epithelial venues (HEV); mediated by adhesion molecules
What is L-selectin and what does it do?
It’s an adhesion molecule expressed by naive T cells, and it binds to carbohydrate moieties of vascular addressing that are expressed on the surface of HEVs. This interaction initiates a rolling interaction that results in diapedesis.
How is L-selectin involved in the process of T-cell diapedesis?
- L-selectin expressed by naive T cells binds to carbohydrate moieties of vascular addressins (CD34 and GlyCAM-1) on the surface of HEVs
- Chemokines bound to the surface of HEVs activate LFA-1 (lymphocyte-function-associated-antigen-1)
- LFA-1 binds to ICAM-1 (intracellular adhesion molecule-1) on the HEV
- The tight interaction allows the T cell to squeeze between two endothelial cells and enter the secondary lymphoid tissue
As they recirculate through the lymphoid tissues, T cells make contact with thousands of antigen-presenting cells every day. What does this allow?
It allows sampling of MHC:peptide complexes, so that each T cell has a high probability of encountering antigens derived from pathogens at any site of infection.
T or F: Contact between naive T cells and dendritic cells acts as a survival signal for the T cell.
T
If a T cell encounters its cognate peptide:MHC complex, LFA-1 undergoes a conformational change that increases its affinity for ______.
ICAMs
What happens to naive T cells that do not encounter specific antigen?
They eventually reach the medulla of the lymph node, enter the lymphatic vessel, return to the bloodstream, and recirculate back to other secondary lymphoid tissues
What are the classes of cell-surface adhesion molecules?
- Selectins
- Mucin-like vascular addressing
- Integrins
- Immunoglobulin superfamily members
What are selectins and what are examples?
Lectins that bind to carbohydrates
Ex: L-selectin and P-selectin
What are mucin-like vascular addressins and what are examples?
Have carbohydrate moieties that are targets for selection binding
Ex: CD34, GlyCAM-1, MAdCAM-1
What are integrins and what’s an example?
They bind to various cell adhesion molecules
Ex: LFA-1
What are immunoglobulin superfamily members targets for? What are examples?
Targets for integrin binding
Ex: ICAMs, CD2, LFA-3
What are the types of antigen presenting cells?
- Dendritic cells
- Macrophages
- B cells
Which type of APC is most efficient at presentation of viral peptide antigens?
Dendritic cells
Which type of APC is best at capturing extracellular organisms such as bacteria and yeast, but can also present antigens derived from intracellular pathogens?
Macrophages
Which type of APC is best at presenting peptide from soluble antigens and can present antigens derived from intracellular and extracellular sources?
B cells
Where can you find the different types of APCs?
Dendritic cells: throughout the body
Macrophages: lymphoid tissue, connective tissue, body cavities
B cells: lymphoid tissue, peripheral blood
What antigens do the different APCs present?
Dendritic cell: peptides, viral antigens, allergens
Macrophages: particulate antigens, intra/extracellular pathogens
B cell: soluble antigens, toxins, viruses
What are the most potent antigen-presenting cells?
Dendritic cells
T or F: Immature dendritic cells are active in presenting antigen.
F: They’re very active in taking up antigen, but they don’t present antigen
Mature dendritic cells are also known as ______.
Interdigitating reticular cells
What are Langerhans’ cells?
Immature dendritic cells of the skin
What do mature dendritic cells express?
- Co-stimulatory molecules
- High levels of MHC class I and II
- Adhesion molecules
- DC-CK- a chemokine that attracts naive T cells
T or F: Resting macrophages express low levels of MHC class II and do not express B7.
T
What is peripheral tolerance?
Macrophages that encounter antigen in absence of bacterial products with present antigen at low levels but won’t supply co-stimulation signals to T cells
Macrophages that ingest microorganisms up-regulate their expression of ____ and ____.
MHC and B7 molecules
T or F: B cells constitutively express B7 costimulator molecules.
F
What does the signaling through CD28 on the T cell do?
Stabilizes IL-2 mRNA and activates the transcriptional activators AP-1 and NF-KB, both of these increase expression of IL-2
What happens to a T cell that recognizes its specific antigen bound to MHC but doesn’t receive the co-stimulation signal?
It becomes anergic
Which cells need more co-stimulation: CD4+ or CD8+?
CD8+
What does activation by an APC other than a dendritic cell require?
Both CD8+ and CD4+ must recognize antigen on the same APC simultaneously
T or F: CD4+ cells can induce macrophages to up regulate B7 expression.
T
What must naive T cells do once they’re activated?
They must re-enter the cell cycle and divide rapidly, producing large numbers of progeny that will differentiate into “armed” effector T cells
The proliferation and differentiation of activated T cells is driven by ________.
IL-2
T or F: T cells can respond to both low and high concentrations of IL-2.
Kinda true, kinda false. T cells constitutively express a moderate affinity IL-2 receptor, and activation of a T cell induces expression of a high affinity form of IL-2 that allows T cells to respond to lower IL-2 concentrations
What is the structure of the high affinity IL-2 receptor?
It’s a heterodimer that consists of an alpha, a beta, and a gamma chain. All three chains traverse the membrane of the T cell
What is the structure of the moderate affinity IL-2 receptor?
Only composed of beta and gamma chains until the T cell is activated. Once activated, an alpha chain is expressed and the moderate affinity receptor becomes a high affinity receptor
What is an armed effector T cell and what differentiates them from naive T cells?
A T cell that can produce all of the proteins that are required for its specialized function
- They don’t need costimulation signals
- They express higher levels of LFA-1 and CD2, but lose L-selectin
- They express VLA-4 that promotes movement into infection site
When to activated T cells differentiate into effector T cells?
After 4-5 days of rapid proliferation of the T cell clonal line
What are the 3 primary classes of effector T cells?
- Effector CD8 T cells
- Type I helper T cells
- Type II helper T cells
Type I helper T cells are primarily involved in ______.
The development of cell-mediated immune responses
What functions do cytokines produced by type I helper cells perform?
- Stimulate macrophages, making them more phagocytic and more bactericidal
- 2nd activation signal by helping B cells; influences class switching and somatic hypermutation
TH1 CD4 cells induce B cells to produce antibodies that are efficient for _______.
Opsonization – IgG1 and IgG3
Type II helper T cells are primarily involved in __________.
Development of humoral immune responses
TH2 CD4 cells induce B cells to produce which antibodies?
All the other isotypes that TH1 cells don’t induce (everything but IgG1 and IgG3)
T or F: Both TH1 and TH2 CD4 cells influence class switching and somatic hypermutation.
T
When CD4 cells leave the thymus they are considered _____ cells. The decision to become TH1 or TH2 occurs when ______.
TH0; Decision to become TH1 or TH2 occurs upon 1st encounter with antigen
Why is the decision between TH1 and TH2 CD4 cells important?
It determines whether the acquired immune response will be primarily cell-mediated or antibody-mediated
CD4 TH0 cells activated in the presence of ____ and _____ tend to become TH1 effector cells.
IL-12 and IFN-gamma
What cytokine inhibits the development of TH2 cells?
IFN-gamma
When is IL-12 produced?
It’s produced by macrophages and dendritic cells in response to viral and some intracellular bacterial infections
CD4 TH0 cells that are activated in the presence of _____ and _______ tend to differentiate into TH2 cells.
IL-4 and IL-6