João Pedro Malhado Flashcards

1
Q

What is the independent particle approximation?

A

Its where the Hamiltonian is approximated as a sum of terms, eahc of which are only dependent on single electrons. It assumes there is no itneraction between electrons and the wavefunction is a product of single electron wavefunctions.

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2
Q

What is the electronic energy of the system in independent particle approximation thought of as?

A

A sum of all the individual energies of the independent electrons E = e1 + e2 + e3 etc.

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3
Q

What is the orbital approximation?

A

Orbital approximation is an extension on the independent particle approximation where we include the interactions between electrons in the Hamiltonian. The wavefunction is now a linear combination of the molecular orbitals instead of just the single product of independent electrons

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4
Q

What is the aim of orbital approximation?

A

To enforce electron indistinguishibility, the idea that two eelctrons cannot be identified due to their identical properties in mass charge spin etc. This ensures the wavefunction stays the same if you swap two indentical particles positions.

It’s aim is to also now take into account electron-electron interactions which due to their same charge and motion, have effects on the system, such as its potential energy and electron density (spatial distribution).

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5
Q

What is LCAO?

A

The linear combination of atomic orbitals, a method used to contstruct molecular orbitals by combining wavefunctions A and wavefunctions B for their respective atoms A and B

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6
Q

What are the key points of LCAO?

A

molecular orbital = ψi = cAϕA + cBϕB (a combination of two atomic orbitals from different atoms)
Coefficients (cA and cB): The coefficients determine the contributions of individual atomic orbitals to the molecular orbital shape.

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7
Q

How do we use secular equations to determine energies and shapes of these molecular orbitals?

A

by solving secular equations derived from the system’s Hamiltonian and overlap matrices.

The equations arise from setting the determinant of a matrix formed from the Hamiltonian (H) and overlap (S) matrices minus the energy (E) to zero.

Hamiltonian matrix is the operator that corresponds to thetotal energy of the system and the S matrix corresponds to the overlap of the orbitals.

(H_AA - E)(H_BB - E) - (H_AB - S_AB)^2 = 0 determines the energy eigenvalues (E) for the molecular orbital, the allowed energies of the system

We use variational theorem by setting the secular determinant to 0 resulting in in approximate energy values

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8
Q

What is variational theorem? What are the key points/rules? What is its application?

A

Variational theorem provides a framework to yield approximate solutions to the Shcrodinger equation.

For a trial wavefunction, the energy always has to be greater or equal to the true ground state energy of the system

Application- By minimising the energy function with repsect to the parameters, the coefficients of the LCAO, we can approximate the energy of the ground state of the system.

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9
Q

How do we combine two degenerate orbitals?

A

we are saying e = HAA = HBB
we will have two combinations, one bonding, in phase combination stabilised with respect to the original orbitals and one out of phase anti-bonding orbital destabilised with resect to the original. Stabilisation effects occur always due to HAB, interaction of the two interacting orbitals.

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10
Q

Why doesn’t He2 form?

A

The helium molecule (He2) doesn’t form despite the existence of bonding and anti-bonding combinations.

The stabilisation energy resulting from the bonding combination is always smaller compared to the destabilisation of anti-bonding

System less energetically stable as the energy penalty from anti-bonding outweighs the energy gain from bonding combo

Therefore, the lack of stabilisation means that He2 is unikely to form under standard conditions

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11
Q

How can we estimate HAB from SAB?

A

We can estimate the interaction integral from the overlap integral as they are proportional HAB∝ -SAB except for short internuclear distances. overlap integral more easy to estimate so we use it as proxy to estimate interaction integral, when SAB is 0 HAB will also be 0 and no stabilisation will occur or orbital interaction

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12
Q

How do we combine non-degenerate orbitals?

A

Non-degenerate orbitals are orbitals that have different energies (HAA ≠ HBB) within a molecular system.

Energetic Difference: HAA ≠ HBB implies that the energies of the orbitals from different atoms are distinct within the system.

Component Distribution: In-phase combinations have a larger component of the lower energy orbital, while out-of-phase combinations have a larger component of the higher energy orbital.

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13
Q

How does Electronegativity and Orbital Energy affect the combination of orbitals?

A

Electronegativity Impact: Orbitals associated with more electronegative atoms tend to have lower energies compared to those of less electronegative atoms.

Stabilization and Destabilization: In-phase combinations (bonding) are stabilized below the energy of the lower-energy orbital, while out-of-phase combinations (anti-bonding) are destabilized above the higher-energy orbital.

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14
Q

How does the energy difference between orbitals affect interaction?

A

The larger the energy difference between orbitals to start with, the smaller the stabilisation and destabilisation energy will be. At too large energy differences, there will be no stabilisation and destabilisation energy and there will be no interaction

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15
Q

What is the overlap of atomic orbitals on the same atom?

A

Overlap integral of distinct atomic orbitals on the same atom is always 0, they’re orthogonal.

Can be proved through symmetry, orbital A would be even and symmetric to 0, like a 1s orbital, orbital B would be like a P orbital and odd when combined we would make an odd as parts would cancel etc.

For the overlap integral to be non-zero, the functions
must have the same symmetry.

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16
Q

What combinations make what in terms of symmetry with orbitals?

A

S + S = S
AS + AS = S
S + AS = AS
AS+ S = AS

17
Q

Do 1s and 2s have an orbital integral (end up with symmetry)?

A

No even though theybhave the same symmetry 2s has a radial node which will make integral 0

18
Q

With a 3 orbital combination, what happens?

A

Interaction with hydrogen’s 1s orbital alters the symmetry of the lithium orbitals’ interaction system. It lowers the symmetry of the system to allow the once orthogonal 2sLi and 2pyLi to have indirect interaction

This qualitiative idea is best to use compared to complex mathematical solutions, it’s more understandable

19
Q

Why is the 1s orbital in Li much lower than 1s is H

A

Not valence, electrons held really tight to nucleus inaccessible for bonding

20
Q

How does the geometry of H3 vary the stabilisation and energy of the orbitals within the molecule

A

Consistently stabilises bonding orbital the smaller the angle is. Stabilises the antibonding so it actually becomes lower in energy than nb the lower the angle gets because becomes more like a bonding orbital. nb becomes more antibonding the lower the angle gets. nb and anti are equal energy at 60 degrees.

21
Q

Preferred geometry depends on the number of electrons: H3+ ion?

A

Angle = 60 degrees, amount of orbital overlap isn’t all that matters here, computational shows that this is the minimum energy geometry not theta<60

22
Q

Preferred geometry depends on the number of electrons: H3- ion?

A

Geometry favoured is actually the one with the lowest energy HOMO, in this case is linear. This is because there’s 4 electrons to play with

23
Q

What is the difference for the H3 fragments energy stabilisation in the AH3 molecules than just H3

A

H3 more spread out so less overlap and so less stabilisation energy is witnessed

24
Q

draw out the molecular orbital diagram for AH3 trigonal planar?

A

Could you?

25
Q

can you draw correlation diagram for the distortion of AH3 into pyramidal structure?

A

S bonding energy decreases as hydrogen atoms interaction increases, interaction with central atom is equal

Bonding py and bonding px conformations as antibonding energy increases and bonding with p overlap decreases

Antibonding py and px energy decreases Decrease anti-bonding
overlap with p orbitals prevails

pz stays the same no bonding

26
Q

Difference between BH3 and NH3 distortions and which it favours

A

BH3 favours trigonal planar and NH3 favours pyramidal, this is due to the amount of electrons they have and so where their lowest HOMO would be as the shape of the molecule would change. The HOMO is lower in energy in pyramidal distortion for NH3 and the HOMO is lower in energy in trigonal planar for BH3

27
Q

What is the Electronic contribution to rotation barrier in ethane

A

Smaller overlap between H
orbitals on different fragments,
reduced anti-bonding character

Small contribution from H atomic
orbitals, very small change in energy

Smaller overlap between H
orbitals on different fragments,
reduced bonding character

small effect so small barrier to roation

28
Q

can you draw the molecular orbital diagram for C-H2?

A

Yes I can, fragment it into C-.. and .-H2.
draw the orbitals that will be getting combined and give them symmetry with respect to plan cutting molecule in half and the plan in which the molecule is in. pz doesn’t have symmetry to combine and so will be left alone. out of phase H2 will combine with px as they are both AS. and py and 2s on carbon and in phase hydrogens will combine in a three way combination, lowest with a lot of s character in phase, one less s character out of phase and one with the antibonding having lots of s character.

29
Q

when drawing the molecular orbital diagram for ethene, why is the bonding orbital of the pys in phase with hydrogens and its antibonding opposite below the bonding orbital of the px and above the antibonding orbital of the pz?

A

Because they are so stabilised and destabilised respectively due to the large overlap so large bonding and antibonding.
this leads to more bonding orbitals filled than anti-bonding so ethene does form.

30
Q

How can we use orbital diagrams to learn more about allyl resonance structures?

A

Can build molecular orbitals for the structure splitting it into fragments as usual, and then filling in the electrons to see where the positive, negative, radical etc. will lie on the molecule- hint they usually lie on terminal atoms

31
Q

How do we build orbital diagrams for butadiene pi orbitals?

A

As usual, split into fragments and draw structures combining, two central atoms as a fragment and two terminal carbons as a fragment. draw the p orbials perpendicular to the plane and and use the plane that cuts molecule in half down the page to asign symmetry. Then draw combined orbitals that have been made and add in electrons

32
Q

What does the orbital diagram for butadiene pi electrons show us about the bonding in the molecule?

A

There is actually a small amount of double bond character with the central atoms as the antibonding of HOMO doesn’t fully cancel bonding of HOMO one as that interaction and overlap is larger

33
Q

What does the nodal structure in butadiene and other long chains of conjugated structures link back to from year 1?

A

Links back to particle in a box, as you increase in energy level the number of nodal planes increase by 1. They also are symmetrically distributed towards the centre of the chain so you can use this for any chain length. Energy levels also alternate from symmetrical to anti-symmetrical as you go up the energy levels.

34
Q
A