Lec #4 (Wk 1): Bacterial Pathogenesis Flashcards

1
Q

What is a pathogen?

A

A micro-organism that causes a disease. A pathogen could be:
- Virus
- Prokaryote (bacteria)
- Protozoa
- Prions (proteins that can trigger normal proteins in the brain to fold abnormally)
- Fungi
- Parasites

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2
Q

What is pathogenesis?

A

How diseases begin and develop.

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3
Q

What is pathogenicity?

A

The ability of a pathogenic agent to cause disease.

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4
Q

What establishes a causative relationship between a microbe & disease?

A

Koch’s postulates - 4 criteria designed to establish this.

Postulate 1 –> the microorganism must be found in abundance in all organisms suffering from the disease BUT absent in healthy organisms.

Postulate 2 –> Micro-organism must be isolated from a diseased organism and cultured.

Postulate 3 –> The cultured microorganism should cause disease when introduced into a healthy organism.

Postulate 4 –> the microorganism must be reisolated from the experimental host and identical to the original specific causative agent.

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5
Q

What are the factors affecting pathogenesis?

A

The host, pathogen, & environment can all influence how a pathogen starts and develops.

Host:
- Immune status
- Genetic susceptibility.
- Behavioral risk factors.

Pathogen:
- Virulence genes.
- Virulence related genes.

Environment:
- Temperature
- H2O availability
- pH

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6
Q

What are the steps of pathogenesis?

A

1- Route of entry.
2- Evasion & survival.
3- Adherence & attachment.
4- Colonization at the site of adherence.
5- Disease symptoms caused by bacterial toxins or invasion.

Evasion –> strategies that the bacterial pathogens use to avoid or inactive the host defenses and ensure their survival.

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7
Q

What are the different entry portal for pathogens & state examples of bacteria in each route of entry.

A

1- Respiratory
- Mycobacterium tuberculosis.
- Haemophilus influenza
- Streptococcus Pneumoniae

2- Skin
- Clostridium Tetani

3- GIT
- Salmonella
- Vibrio Cholera
- Shigella Dysenteriae

4- Genital
- Neisseria Gonorrhoeae

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8
Q

Will we still have a disease if a pathogen is supposed to enter through the skin but does so through the GIT?

A

No, entry portals are specific.

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9
Q

What does evasion mean & what are the different ways that pathogens cause evasion?

A

Evasion is the way in which pathogens avoid detection by the host.
1- Inhibit phagocytosis.
2- Secrete toxins to modulate the cell death pathways.
3- Modulate surface structure to avoid being recognized.

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10
Q

How does staphylococcus Aureus cause evasion & survival within a host?

A

They secrete a protein called Staphylococcus Aureus Protein A (SpA). This protein inhibits phagocytosis through 2 different ways:
1- SpA can bind to the Fc region of the antibody which means the Fc region of the antibody is now covered and can no longer bind to the Fc receptor present on the surface of the neutrophil, hence neutrophil cannot perform phagocytosis.

2- SpA protein can bind to the Fab region of the antibody & these antibodies are located on the surface of the B-cell. This consequently stimulates the death of the B-cell and can no longer secrete antibodies specific to the S-aureus so B-cells undergo apoptosis thus reducing phagocytosis.

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11
Q

How does Neisseria Meningitidis cause evasion & survival within a host?

A

Neisseria Meningitidis produces Neisseria Meningitidis Factor H Binding Protein (fHBP) and this binds to factor H (factor H usually stimulates C3b), so by binding to Factor H, C3b is inactivated.
So when fHBP binds to factor H –> minimize complement activation and enhances survival of this bacteria.

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12
Q

What are the different bacterial adherence factors?

A
  • Fimbriae
  • Pilli
  • Capsule
  • Lipotechoic acid & techoic acid
  • Lipopolysaccharide (LPS)
  • Adhesin
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13
Q

What does colonization mean? How does it occur?

A

Colonization is the establishment & growth of a microorganism on a body surface.
1- Enter lumen of the new host & pass through the mucus.
2- Bind to the epithelium via host surface carbohydrates and proteins.
3- Obtain nutrients from the host.
4- Avoid host cellular & humoral immunity.
5- Exploit inflammation to exit or invade host.

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14
Q

What does virulence mean? How does it differ from pathogenicity?

A

Virulence is the degree of pathogenicity. So pathogenicity is more of a qualitative variable (i.e yes or no, is it capable of causing a disease?) whereas Virulence is quantitative, it tells us the level/extent of damage that an organism can cause to the host.

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15
Q

How can we measure bacterial virulence?

A

Measured by looking at the no. of bacteria required to cause the disease.
Infective Dose (ID) 50 –> the amount of bacteria required to infect 50% of the animals exposed.

Lethal Dose (LD) 50 –> the amount of bacteria required to kill 50% of the animal exposed.

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16
Q

What is the ID50?

A

Infective Dose 50 is the amount of bacteria required to infect 50% of the animals exposed.

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17
Q

What is the LD50?

A

Lethal Dose 50 is the amount of bacteria required to kill 50% of the animals exposed.

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18
Q

What are virulence factors? Examples?

A

Virulence factors are molecules produced by the bacteria that enables them to achieve all the steps of pathogenesis.
Examples:
- Flagella
- Adhesion Pilli
- Capsule
- Virulent enzyme
- Iron binding proteins
- Toxins (Endo & exotoxins)
- virulent surface proteins.
- LPS

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19
Q

Flagella’s role in acting as a virulent factor?

A

A factor to swim to reach the specific tissue or organ.

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20
Q

Outer capsule’s role in acting as a virulent factor?

A

Outer capsule helps in adhesion & resists phagocytosis. It is non-antigenic because it is identical to that found on the CT.
E.g: streptococcus pyogenes have hyaluronic acid capsule.

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21
Q

LPS’s role in acting as a virulent factor? E.g?

A

It is a glycolipid found at the outer membrane which is a factor to adhere to the surface & interact w the host.
Helicobacter Pylori, the LPS plays a key factor to establish colonization & persistence in the gastric niche.

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22
Q

Iron binding proteins role in acting as a virulent factor?

A

The ability to acquire iron in an iron-poor environment during infection is necessary for some bacteria. Thus, bacteria secrete proteins with high affinity for iron.
Those proteins:
- Heme-binding proteins (Hemophores).
- Siderophores.
- Transferrin or Lactoferrin-bound iron.
- Soluble Fe2+

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23
Q

Virulent enzymes role in acting as a virulent factor? Their classes?

A

Some pathogen produce extracellular enzymes (exoenzymes) to enable them to invade host cells & deeper tissues.
Classes:
- Glycohydrolases
- Proteases
- Phospholipases
- Nucleases

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24
Q

One of the virulent factors are virulent enzymes. One of the classes of these virulent enzymes is glycohydrolases, talk about it.

A

An example of glycohydrolases is hyaluronidase which is an enzyme inducing host tissue damage. This enzyme is produced by pathogen like staphylococcus aureus, streptococcus pyogenes, & clostridium perfringens.
So these bacteria secrete hylauronidase which degrades the hylauronic acid which acts as an intracellular cement between adjacent cells in the CT.

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25
Q

One of the virulent factors are virulent enzymes. One of the classes of these virulent enzymes is proteases, talk about it.

A

Collagenase is an example of a protease that is produced by some bacteria like clostridium perfringens. It helps degrade the collagen present between the cells in the connective tissue.

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26
Q

One of the virulent factors are virulent enzymes. One of the classes of these virulent enzymes is nucleases, talk about it.

A

An example of nuclease is DNAse which some bacterias like staphylococcus aureus & streptococcus produce. So when a bacterial+host cells die at the site of infection, they release their intracellular content include the DNA chromosome which is the larger out of all. So this large mass of DNA can trap bacteria & prevent their spread. So DNAse help to degrade this mesh to enable the bacteria to penetrate further.

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27
Q

One of the virulent factors are virulent enzymes. One of the classes of these virulent enzymes is Phospholipases, talk about it.

A

Enzymes which degrade the phospholipid of the cell membrane & cause lysis of target cells.
Examples: Clostridium perfringens produce phospholipase, and B. anthracis bacteria produces phospholipase C.
The role of phospholipase in bacterial virulence is phagosomal escape. When B. anthracis is ingested by phagocytic cells, it can degrade the membrane of the phagosome before fusing w the lysosome, allowing the pathogen to escape.

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28
Q

Which pathogen is responsible for producing phospholipase C?

A

B. anthracis which is responsible for the disease anthrax.

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29
Q

What are coagulases & kinases?

A

Coagulase –> enzyme which clots the fibrinogen in the blood (i.e the bacteria outside of the blood vessel, fibrinogen exits the blood vessel to the site of bacteria and is converted to fibrin to create a clot around this bacteria) in order to protect the bacterium from phagocytosis & isolate them from other immune cells.

Kinases –> enzyme released by bacteria which breaks this clot that coagulase helped to create, thus breaking free the bacteria and helping it to spread and cause bacteremia (bacteria in blood stream).

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30
Q

Which bacterial enzyme contributes to bacteremia?

A

Kinase.
Breaks the clot created around the bacteria by the coagulase and allows the bacteria to spread and enter the blood vessels.

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31
Q

What are bacterial toxins?

A

They can be small molecules, peptides, or proteins produced by the bacteria. they are capable of invading & causing damage to the tissues. They are often responsible for major symptoms of bacterial infection.

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32
Q

What does toxigenicity mean?

A

The ability of a pathogen to produce toxins to cause damage to the host cells.

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33
Q

What was first to be discovered as a virulence bacterial toxin?

A

Diphtheria toxin.

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34
Q

What are the types of toxins available?

A

Exotoxins
Endotoxins

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35
Q

What are exotoxins?

A

They are proteins made up of 2 parts: part A is the effector, part B binds to the receptor and are joint by a disulfide bond, produced by the bacteria, usually released by Gram-positive bacteria, and released after lysis happened.
Action: SPECIFIC. So each exotoxin targets a specific receptor on specific cells.
Heat stability: most exotoxins aren’t heat stable and denatured at temperatures above 41 degrees.
Lethality: very small concentrations of exotoxins can be lethal.

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36
Q

Provide examples of diseases caused by exotoxin release?

A

Diphtheria
Tetanus
Botulism

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37
Q

Where are the genes of exotoxins commonly found?

A

Plasmids or phages.

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38
Q

What are endotoxins?

A

They are the lipid portion of the LPS that are part of the cell wall of gram-negative bacteria. Released when the bacteria dies and the cell wall breaks apart.

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39
Q

for the exotoxin protein to be active, what shall be present?

A

Disulfide bond needs to be seen between the 2 parts of protein (part A is effector, part B binds to the receptor).

40
Q

What are the types of toxins?

A

1- A-B toxins.
2- Type III cytotoxins.
3- Membrane damaging toxins; subdivided into 4 parts.
- Lipases.
- Hemolysins & leucocidins.
- Pore forming toxins.
- Exfoliative toxins
4- Extracellular matrix toxins.
5- Neurotoxins.
6- Enterotoxins.
7- Superantigens.

41
Q

What is the A-B toxins?

A

They are proteins secreted by bacteria which enter the cells & exert their toxic effects by affecting intracellular processes. Protein is made up of 2 parts:
Part (A) is the effector.
Part (B) is the one binding to the receptor.
This protein is active only when part A & B are linked via disulfide bonds.

42
Q

State examples of pathogens releasing A-B toxins.

A

Remember the abbreviation: ABCD ST
(abcd street).
A- Anthrax.
B- Botulinum.
C- Cholera.
D- Diphtheria.
S- Shiga.
T- Tetanus.

43
Q

How does the A-B Diphtheria toxin exert its effect?

A

A-B diphtheria toxin is made up of a single A subunit & single B subunit.
Blocks protein synthesis, then kills the cell and membrane covers the throat & tonsils.

44
Q

Which bacteria causes diphtheria?

A

Gram-positive bacteria called corynebacterium diphtheriae.

45
Q

What is the cholera A-B toxin?

A

A+5B
Made of 1 A subunit, 5 B subunits.
Increases the CAMP in the intestines which allows for the movement of fluid into the lumen, and thus causing the classical cholera diarrhea.

46
Q

What is the A-B Anthrax toxin?

A

2A+B
Made up of 2 A subunits, and 1 B subunit.
Increases the expression of pro-inflammatory mediators, hence causing swelling of neck or neck glands. Also causes fever & chills.

47
Q

What is type III cytotoxin? Which types of bacteria is it found in?

A

Toxins secreted from the bacteria by type III secretion apparatuses (T3SSs).
Found in:
Salmonella
Shigella
Cholera
Pseudomonas.

48
Q

Provide an example of type III cytotoxin.

A

Pseudomonas Aeruginosa secretes ExoU which is a major virulence factor with phospholipase activity. It is responsible for acute lung injury & sepsis in immunocompromised patients.

49
Q

What are the types of membrane damaging toxins?

A

1- Lipases; lecthinase
They lyse the cells, eliminate defenses, & provide nutrition for bacteria.

2- Hemolysins & leucocidins.
Lyse blood cells.

3- Pore forming toxins
Insert into the membrane & allow water to follow in then lyse the cells.

4- Exfoliative toxins
Seen in Staphylococcus aureus strains.

50
Q

What are hemolysins & leucocidins?

A

These are 1 of the types of membrane damaging cells. They work by forming pores in the cell membranes thus causing leakage of cytoplasmic contents & cell lysis.
These toxins were originally thought to target the following:
Hemolysins –> RBCs
Leucocidins –> Leukocytes
But we now know they can affect other cells as well.

51
Q

What are pore-forming toxins? Which bacteria produces them?

A

These are a type of membrane damaging cells. They bind to membrane receptors, which leads to oligomerization, and consequently insertion of an aqueous pore into the plasma membrane.
Bacteria producing them:
- Streptococcus pneumoniae
- Group A & B streptococci
- Staphylococcus Aureus
- Escherichia coli
- Mycobacterium tuberculosis.

52
Q

Which bacteria produces heterogenous pore-forming toxins? What does it do?

A

Produced by a variety of bacteria and the well known toxin is: Streptolysin O. It is a toxin produced by group A streptococcus bacteria. Binds to cholesterol & damages the liposomes thus causing cell lysis & tissue damage.

53
Q

What are exfoliative toxins? Produced by which bacteria?

A

Exfoliative toxins are AKA Epidermolytic toxins. Produced by certain strains of staphylococcus aureus.

54
Q

What do exfoliative toxins do?

A

They are serine proteases which recognize and hydrolyze desmosome proteins in the skin. They cause the loss of keratinocytes, loss of cell-cell adhesion, induces peeling of the skin, & blister formation.

55
Q

Provide examples of extracellular matrix toxins.

A
  • Hyaluronidase.
  • Collagenase.
  • Streptokinase.
56
Q

What are neurotoxins?

A

These are toxins secreted at different sites then make their way to the circulatory+lymphatic systems till they reach the brain & interfere with nerve transmission.

57
Q

Provide examples of bacteria releasing neurotoxins.

A

Clostridium tetani = tetanus toxin.
Clostridium Botulinum = Botulinum toxin.

58
Q

Difference between tetanus toxins and botulinum toxin?

A

Tetanus toxin inhibits release of GABA & glycine thus preventing relaxation of muscles & causing uncontrollable muscle contraction thus leading to SPASTIC paralysis.

Whereas botulinum toxin has an antagonistic action where it inhibits release of Acetylcholine which blocks muscle contraction and lead to FLACCID paralysis.

59
Q

Tetanus toxin inhibits release of?

A

GABA and glycine.
Which leads to uncontrollable muscle contraction & SPASTIC paralysis.

60
Q

Botulinum toxin inhibits release of?

A

Acetylcholine. Thus blocks muscle contraction which leads to flaccid paralysis.

61
Q

What are enterotoxins?

A

Toxins which typically cause excessive release of fluid & electrolytes from the lining epithelium thus leading to GIT inflammation & severe diarrhea.

62
Q

Provide examples of bacteria which produce enterotoxins.

A

Vibrio cholera.
Clostridium difficile.

63
Q

What are superantigens?

A

These are exotoxins which trigger an excessive, non-specific stimulation of the immune cells to release cytokines, referred to as cytokine storm. This elicits a strong immune & inflammatory response that can cause life-threatening high fevers, multi-organ failure, shock, & death.

64
Q

Which bacteria produces superantigens?

A

Staphylococcus Aureus produces toxic shock syndrome toxins.
Some strains of streptococcus pyogenes also produce super antigens called streptococcal mitogenic exotoxins & streptococcal pyrogenic toxins.

65
Q

Where can exotoxins be released?

A
  • Could grow in food & thus is ingested.
  • Colonize mucosal surfaces.
  • Colonize wounds.
66
Q

What are endotoxins (in details)?

A

Endotoxins are the lipid component of the LPS found on the outer membrane of gram-negative bacteria, this lipid component is called Lipid A.
Released by gram negative bacteria & Listeria Monocytongens (the only gram positive).
Endotoxins are GENERAL in their action, not specific like in the exotoxins. They can lead to fever, diarrhea, vomiting, & septic shock.
Heat stability: VERY heat stable.
Lethality: moderately toxic.

67
Q

Examples of diseases caused by endotoxins?

A

Sepsis & meningococcemia.

68
Q

When are endotoxins released?

A

When the bacteria dies or undergoes binary fission.

69
Q

Which part of the LPS is responsible for the toxic properties of endotoxins?

A

Lipid A.

70
Q

What does a LOW concentration of endotoxin cause (i.e what symptoms)?

A

1- Stimulates the Kupffer cells to increase levels of InterLeukins (ILs) and Tumor Necrosis Factor (TNF) which causes FEVER.
2- Activates the B-lymphocytes thus increasing antibody production.
3- Causes neutrophils to increase kinins which cause vasodilation.
4- Activates complement system thus causing inflammation.

71
Q

What does a HIGH concentration of endotoxins cause?

A

Causes too many cytokines to be released hence a strong inflammatory response which can cause:
- Septic shock (Where blood pressure is too low after an infection).
- Intravascular coagulation (where proteins controlling blood clotting become overactive).

72
Q

Where is the location of the gene coding for exotoxin? endotoxin?

A

Exotoxin: plasmids & phages.
Endotoxin: on bacterial chromosome.

73
Q

Which has higher toxicity, endotoxin or exotoxin?

A

Exotoxin is highly toxic, endotoxin has low toxicity.

74
Q

Describe the antigenicity of exotoxin & endotoxin.

A

Exotoxin is highly antigenic where the host forms antibodies called antitoxins.
Endotoxins are poorly antigenic.

75
Q

Are vaccines available for exotoxins or endotoxins?

A

Exotoxins have vaccines (toxoids).
Endotoxins have no vaccines.

76
Q

Do endotoxins or exotoxins have high or low heat stability?

A

Endotoxins = heat stable.
Exotoxin = heat unstable.

77
Q

Popular examples of diseases caused by exotoxins & endotoxins.

A

Exotoxins = Cholera, tetanus, & botulism.
Endotoxins = Meningococcemia, & sepsis.

78
Q

What is staphylococcus aureus?

A

A gram positive bacteria that are facultative anaerobes meaning they can survive in anaerobic and aerobic conditions. It is an opportunistic pathogen meaning that it is normally found in skin flora but can become pathogenic.
A facultative anaerobic organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent.

79
Q

what are the toxins produced by staphylococcus aureus?

A

1- Toxic Shock Syndrome Toxin (TSST).
2- Panton-Valentine Leukocidin Toxin.
3- Hemolysin.
4- Exfoliatin.
5- Enterotoxin.

80
Q

What does the TSST of the staphylococcus aureus toxin cause?

A

TSST-1 is produced at the site of infection and binds to the MHC II receptor present on the APC. Upon binding, they stimulate them to release loads of pro-inflammatory chemicals (cytokines) called a cytokine storm. This storm leads to the symptoms:
- Fever
- Rash
- Low blood pressure
all those are symptoms of Toxic Shock syndrome.

81
Q

What does the Panton valentine leukocidin toxin?

A

Punch holes on the leukocytes thus causing them to die via necrosis which triggers inflammation.

82
Q

What does hemolysin cause?

A

pore-forming toxin that affects erythrocytes and enables them to release their iron.

83
Q

What does staphylococcal exfoliatin cause?

A

This is a toxin produced by the staphylococcus Aerus. Causes Staphylococcal Scalded Skin Syndrome (SSSS or Ritter’s disease). This creates painful patches & blisters which often resolves within weeks.

84
Q

What does staphylococcal enterotoxin cause?

A

Staph aerus may land on the food & start generating enterotoxins which could be active even after the bacteria is killed by cooking. This enterotoxin causes food poisoning & if this enterotoxin somehow got into the bloodstream; toxic shock syndrome.

85
Q

Is penicillin effective in treating S. aureus?

A

No, almost all strains of staph aureus have beta-lactamase which allows them to disable beta lactam antibiotics (E.g penicillin is from the beta lactam class). A new type of beta lactam called Methicillin which isn’t easily destroyed by the beta lactamase in S.auerus but somehow S.aeurus developed Methicillin Resistant S. Aureus (MRSA) encoded by the mecA gene, this gene codes for the protein PBP2A (Penicillin Binding Protein 2A). PBP2A has a low affinity for beta-lactam antibiotics such as methicillin and penicillin.

86
Q

What to prescribe for patients with S.aeurus and MRSA?

A

Clindamycin & Vancomycin.
But other alternatives include:
- Tetracycline.
- Trimethoprim/sulfamethoxazole.
- Linezolid.
- Tigecycline.
- Daptomycin.
- Quinupristin-dalfopristin.

87
Q

What infections does S. aeurus cause?

A
  • Endocarditis.
  • Food poisoning.
  • Toxic shock syndrome.
  • Staphylococcal Scalded Skin Syndrome.
  • Pneumonia.
  • Catheter infections.
  • Cutaneous infections (impetigo, folliculitis, furuncle, & carbuncle).
  • Septic arthritis.
88
Q

What helps S.aureus cause infection?

A

Skin abscess.

89
Q

What are the S. aureus virulent factors?

A

1- Capsule; inhibits phagocytosis.

2- Enzymes:
- Coagulase: impedes the progression of leukocytes to the infected area by producing clots.
- Proteases, lipases, & hyaluronidase; degrades surrounding tissues so infection can spread.
- B-lactamase; degrades penicillin.

3- Toxins
- Leukocidins; kills WBCs
- Hemolysins; kill RBCs
- Enterotoxin; cause symptoms in the GIT.
- Exfoliative toxins; cause separation of the dermis & epidermis.

4- Protein A; attaches to antibodies thus inhibiting phagocytosis.

90
Q

What are the skin infections caused by S.aureus?

A

1- Folliculitis.
2- Hidradenitis.
3- Furuncle.
4- Carbuncle.
5- Scalded Skin Syndrome.
6- Staphylococcal Impetigo
7- Toxic Shock Syndrome.

91
Q

What are those:
Folliculitis
Hidradenitis
Furuncle
Carbuncle

A

Folliculitis; inflammation of hair follicle.
Hidradenitis; inflammation of a gland.
Furuncle; when the infection extends from the follicle to the surrounding tissues.
Carbuncle; interconnection of multiple furuncles.

92
Q

What is Scalded Skin Syndrome?

A

Skin infection that could be caused by S.aerus gram positive bacteria. Common in infants where the patient experiences malaise & severe exfoliation (Removal of dead cells).

93
Q

What is staphylococcal impetigo?

A

Skin infection that could be caused by S.aerus gram positive bacteria. A superficial skin infection characterized by “Weeping” pus production (pyoderma).

94
Q

What is toxic shock syndrome?

A

Series of blood infections affecting the kidney, blood, and muscles which results in death in hours.

95
Q

What do we call pus in the skin medically? what is it made up of?

A

Pyoderma.
Made of a mix of living+dead neutrophils, dead tissue, & bacteria.

96
Q

What gives pus its green color?

A

Myeloperoxidase - enzyme present within the neutrophil.