Lecture 10 Structure and Function of AQP Flashcards
Describe the hourglass model of AQP
The structure of AQP consists of a protein with 6 transmembrane domains and intracellular amino and carboxy termini. Between transmembrane domains 2-3 and transmembrane domains 5-6 are the B-loop and E-loop which dip into the membrane. In the middle of these B-loop and E-loops are NPA motifs that dip back into the membrane and come together to make the pore of the AQP channel
What is the relation between the mercurial sensitivity conferring residue and its location in the structure
C189 lies near the opening of the pore hence explaining why mercurial binding to this residue is associated with decreased permeability
Other than cysteine residues near the pore what other key amino acids are present in AQP that seem to be involved in permeability
There is an additional alanine residue present in the intracellular side of the B loop which is also close to the pore. Changing this alanine for a larger residue prevents permeability to water and similarly switching this alanine for a cysteine makes the pore additionally mercury sensitive as Hg-binding to a residue at this position prevents permeability
C189 is present in all AQPs T or F
F – mercurial sensitivity is different in each AQP
What work showed that AQPs form as tetramers
Early studies using western blots showed bands that were multiples of the 28kDa protein. It was then confirmed to be the case using cryo-EM
What two hypotheses were there for the way the AQP tetramer forms a pore
The first idea was that all 4 subunits associate to form 1 central pore. The other idea was that each subunit itself possessed a functional water pore
How was it investigated whether the functional unit of an AQP was 1 monomer or the tetramer
Investigators constructed tandem dimers of wild-type AQP1 and C189S mutant channels that are insensitive to mercury and then expressed these dimers in Xenopus oocytes. The rationale was that upon injection of the tandem dimer containing 1 wild type and 1 mutant monomer into Xenopus oocytes you effectively make an APQ1 tetramer consisting of 2 wild type and 2 mutant monomers. Hence If each monomer forms its own pore the addition of mercury to oocytes expressing the tandem dimers would cause the water permeability to decrease by half. This is because only half of the monomers are mercury sensitive and the other half are C189S mutants. On the other hand if all four subunits form one central pore addition of mercury would cause a total inhibition of water permeability as mercury blockade of two of the subunits would be sufficient to inhibit the functioning of the whole tetramer
Below are the results of the experiments investigating whether the functional unit of AQP1 was 1 individual monomer or indeed the tetramer itself. Describe what these results show and what this means
Hg reduced the H2O permeability of AQP1-AQP1 dimers to background levels. In contrast Hg had no effect on the H2O permeability of C189S-C189S dimers and reduced the H2O permeability of AQP1-C189S dimers by 50%. This hence shows that each of the AQP1 monomers is a functional H2O channel as there was no total inhibition of water permeability in the monomer expressing half mutant half wild type channels
Although it was found that each AQP1 monomer did forms its own functional channel what can be said about this central pore that the monomers seem to associate around
The central pore was hypothesised to most likely be involved in NH3 CO2 CO(NH2)2 and Na+ transport
What is the diameter of the AQP1 pore how does this relate to its function
The pore of AQP1 is between 1.8 and 2.2Å (1.8-2.2x10-10m) this is not much bigger than a water molecule
How does AQP1 prevent H+ from entering the pore along the backbone of water molecules in order to remain H2O selective
As water molecules move through the pore as they come to the NPA motifs the hydrogen bonding between the molecules is broken. The water molecules then form bonds with the asparagine residues. This allows for a single file movement of water through the pore which also prevents H+ from hopping down the backbone
What is the specific function of the NPA motif of the AQP1 pore
Water molecules form bonds with the asparagine residues in the NPA motifs. This is critical for the single-file movement of H2O through the channel
Crystal structures of bacterial AQP1 attempting to find the site of Hg binding couldn’t find mercury binding to the channel why was this
Bacterial AQP1 is not mercury sensitive
What is the significance of Thr183 in bacterial AQP1
This is the residue that is equivalent to C189 in humans. Switching this residues to a cysteine renders the AQP1 mercury sensitive
Where-else has mercury been found to bind within AQP1
Hg has also been found to bind near to the central cleft this is thought to effect CO2 transport
What is unusual about human AQP4
It isn’t mercury sensitive as it lacks C189 or any equivalent residues
Where is AQP5 found
In the lungs and salivary glands
Where are AQPs 2 3 and 4 primarily expressed
AQP2 is expressed on the apical membrane of the cells of the colleting duct whilst AQP3/4 is on the basolateral membrane of those cells