Proteins Flashcards

0
Q

What type of collagens are type IV and VI

A

Network forming - important in basal Lamina

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1
Q

What type of collagens are type one, 2 and 3.

A

Fibril-forming

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2
Q

Type V, IX, XII collagens are what?

A

May be involved in cross linking. Fibril-associated collagens

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3
Q

What occurs after secretion during biosynthesis of collagen

A

Removal of extension peptides

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4
Q

Which two processes of collagen synthesis occur within fibroblasts.

A

Post translational modifications and pro collagen triple helical cable

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5
Q

What is the repeating sequence of collagen

A

Gly - X - Y. Gly occurs every third residue.

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6
Q

What is X often in the collagen sequence

A

X often Pro

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7
Q

What is Y often in collagen sequence.

A

Hyp

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8
Q

What is hydroxyproline involved in?

A

Hydroxyproline is involved in H - bond formation which stabilizes triple helix of collagen.

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9
Q

How is hydroxyproline formed.

A

Proline undergoes hydroxylation by enzyme prolyl hydroxylase which requires vitamin c as a co factor. (Ascorbic acid)

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10
Q

What is hydroxylysine used for in collagen

A

Hydroxylysine residues are attachment sites for sugar residues and are involved in cross linking between collagen chains

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11
Q

Where are gly, pro and hyp residues found in collagen.

A

Gly residues pack into the centre

Pro and Hyp residues are on the outside.

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12
Q

How is collage similar to the construction of a rope?

A

Fibres twisted in opposite directions

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13
Q

What do peptidase enzymes do in the assembly of collagen

A

Peptidase enzymes remove extension peptides after secretion into extra cellular space.

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14
Q

How does collagen assembly begin?

A

Begins with disulphides bond formation between C-terminal extensions - facilitates triple helix assembly.

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15
Q

What does Lysyl oxidase do to collagen structure

A

Lysyl oxidase deaminates lysine and hydroxylysine to from allysine.

Allysine forms cross links with Lys.

Covalent Cross linking between tropocollagen molecules gives strength and rigidity. —> less elastic.

16
Q

What are nucleation sites in collagen microfibrils

A

They are holes between tropocollagen fibres which are for calcium deposition. Related to bone formation

17
Q

What causes Ehlers Danlos Type VI

A

Lysyl oxidase deficiency.

18
Q

What causes osteogenesis imperfecta

A

Mutation in collagen chains. TYPE 1 collagen.

19
Q

Where do the hydrogen bonds form in an alpha helix

A

They form between C=O and NH of the amino acid 4 residues ahead in the linear sequence.

Some elasticity

20
Q

What is the structure of beta pleated sheets?

A

Stabilised by H bonding between adjacent strands.

It has no elasticity and is zig zag shape. R groups lie outside plane of sheet