Structual characterisation Flashcards

1
Q

heteroatoms

A

any element that is not carbon or hydrogen

eg nitrogen,oxygen, sulphur

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2
Q

empirical formula vs molecular formula

A

EF = simplest whole number ration of elements in the structure

MF = actual number

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3
Q

Double bond equivalence DBE

A

also called index of hydrogen deficiency IHD

H reference is the number of hydrogens required to make CnH2n+2 - saturated alkane

H molecule = number of hydrogens actually present

DBE = H ref - H mol /2

DBE = 1 = one double bond or ring
DBE = two double bonds or rings or one triple bond

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4
Q

molecules with heteroatoms

A

with oxygen - can be ignored as does not affect DBE so no change to H ref - so COH/COOH/COC

Subtract one H from H ref for every halogen present

Add one H to H ref for every nitrogen

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5
Q

mass spectrometry

A

this gives us the mass of molecules and can therefore distinguish between empirical and molecular formulas

  • the mass and charge affects the acceleration as will have different path lengths so will produce different peaks
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6
Q

Base peak

A

largest peak to which the relative abundance of all other peaks are measured to

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7
Q

parent ion or molecular ion peak

A

the peak at which is produced by the original molecule before fragmentation

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8
Q

exact mass

A

measuring to 4 decimal places

  • calculating the exact mass using the most common isotope. - this helps distinguish between compounds with similar RAM
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9
Q

electromagnetic radiation

A

is a wave consisting of orthogonal electrical magnetic fields that can travel through space

as energy decreases, frequency decreases but wavelength increases

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10
Q

defining waves

A

wavelength = lamdaba (metres)
frequency = v (s-1)
wavenumber -V (cm-1)
speed light = c = 2.998x108ms-1

c=vlamdaba

need to remember to convert these to m ->cm

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11
Q

wave particle duality

A

electromagnetic radiation can be a wave and small packet of energy

energy of photon is related to its frequency

converting to wave number for this allows us to put the information onto a better scale

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12
Q

wave particle duality equations

A

E = hv
h = 6.626x10-34Js = plancks constant

E=hc/lambada

E=hc-V

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13
Q

quantisation of energy levels

A

electronic, vibrational and rotational energy levels in molecules can be compared

  • energy gap between electorns in valence orbitals is quite large
  • energy gap between vibrational energy levels smaller
  • energy gap between rotational energy levels smallest

decreasing energy gap between different states

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14
Q

UV/Visible spectroscopy

A

when photon in Uv or visible range is absorbed, an electron is promoted from a full bonding orbital to a empty anti bonding orbital

the electrons that do this are double bonded electrons, pi bonds - undergone a pi tranistion

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15
Q

energy gap between pi and sigma orbitals

A

energy gap of sigma orbitals are not in the UV/visible region of EM spectrum as the gap is too big to be associated with this region

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16
Q

transmittance and absorbance

A

T = IT/IO
io = intensity of incidient light - starting light
it = intensity of transmitted light - after been through solution

A = log 10 IO/IT
A = absorbance

17
Q

beer lambert law

A

A = ecl

18
Q

graphs with transmittance and absorbance

A

the absorbance is directly proportional to the concentration and transmittance has an exponential relationship

19
Q

infra red spectroscopy

A

photons in IR region do not have enough energy to promote electrons so instead they excite vibrations in a molecule

these molecular vibrations occur at fixed frequencies which depend upon how heavy the atoms are and how strong the bonds are in order to identify them

20
Q

vibrations

A

will be vibrating and stretching at a fixed frequency

if we excite a vibration the frequency does not change but the amplitude of the vibration does - stretching further so easily detected

21
Q

dipole moments

A

this occurs when there is a separation of charge

this is larger when
- the difference in electronegativity increases
- the separation of the atom decreases

to be IR active, the dipole moment must change during the vibration - if not then there is no peak

22
Q

strectches

A

is there is a symmetrical compound like co2

if there is a symmetric stretch then there is no dipole moment

if asymmetric then there is

23
Q

IR spectroscopy

A

the vibrational frequency depends on:
- how stiff the bond is - bond force constant
- the sizes of the atoms involved in the bond

v=1/2pi x square root k/u

u=m1xm2/m1+m2

24
Q

infrared spectra

A

always plotted as transmittance vs frequency

there is a fingerprint region which is 1500> and then the rest of the region which can be used to identify the compound

-OH in alcohol = whale
-OH in COOH = mountain

25
Q

IR amine

A

N-H stretch, n-h bend just before fingerprint

26
Q

NMR

A

used to obtain the information on the structure of the carbon hydrogen framework of the molecules and functional groups

27
Q

nuclear spin

A

have to have odd mass number in order to have a nuclear spin hence with H1 and carbon 13 are used

when there is no external magnetic field the nuclear spins are random but when applied, they align parallel or anti-parallel to the field

28
Q

change in energy levels and splitting to give different peaks

A

tis is dependent on the strength of the magentic field, the bigger the magnet, the stronger the magnet field so larger the energy level split

degree of shielding - different H environments have different degrees of shielding which causes the different peaks

magnetogyric ratio - specific to a particular type of nucleus

29
Q

magnetic field strength

A

the energy difference between spins is proportional to the magnetic field of the spectrometre

30
Q

magnetogyric ratio

A

the energy difference between spins is also proportional to the magnetogyric ratio

this depends on the magnetic moment of that nucelus and the spin where the energy separation achieved for protons is quoted as the strength

v=yB/2pi

31
Q

shielding

A

The magnetic field experienced will be different for H atoms in different environments and therefore absorb a different frequency

32
Q

degree of shielding

A

fluorine is more electronegative that chlorine

the electron density will be pulled away from the hydrogen atoms

these atoms are less shielded than chlorine counterparts

so the magnetic field experience on the hydrogen atoms in fluorine will be bigger so will absorb at a higher frequency

33
Q

TMS

A

the reference signal for 13C and H NMR - tetramethylsilane
4 ch3 groups around Silicon

34
Q

chemical shift and resonance frequency

A

the difference in resonance frequency is quoted by the chemical shift (the natural frequency at which a medium vibrates at the highest amplitidue ).

chemical shift = shift in frequency from reference / operating freq of spectrometre

35
Q

splitting in proton NMR

A

the signal intensity is proportional to the number of protons

when there are H atoms on adjacent carbon atoms, then the magnetic field is affected

36
Q

splitting

A

singlet - no hydrogens in neighbouring environment

double - one hydrogen in neighbouring environment

triplet - 2

quartet - 3

have to be in different environments

37
Q
A