Theme 1b Flashcards

1
Q

What are the components of DNA

A

Pentose sugar, nitrogenous base and phosphate

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2
Q

What does the pentose sugar structure look like

A

Look at photos for reference lol

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3
Q

What is the difference between RNA and DNA sugars

A

Type of chemical group bound to the 2’ carbon

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4
Q

What are the nitrogenous bases for DNA and RNA

A

DNA: adenine (purine), guanine (purine), cytosine (pyrimidine) and thymine (pyrimidine)
RNA: adenine (purine), guanine (purine), cytosine (pyrimidine) and uracil (pyrimidine)

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5
Q

What is a nucleoside

A

Molecules of a sugar and base

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6
Q

What is a deoxyribosenucleoside

A

2-deoxyribose sugar and purine/pyrimidine base
Binds to Cl’ end of deoxyribose/ribose

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7
Q

What is the difference between a deoxyribonucleoside and a ribonucleoside

A

There would be an OH on the 2’ carbon

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8
Q

What is a nucleotide

A

A nucleoside and a phosphate with the phosphate group attached to the 5’ carbon of the ribose and deoxyribose sugars

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9
Q

What are some properties of DNA

A

A polymer of deoxyribonucleotides
-nucleotide monomers polymerize via phosphodiester bonds
-covalent bonds form between phosphate and the C3’ and C5’ of two pentose sugars (pentose phosphate backbone)
-has polarity with a 5’ PO4 end and a C3’ OH end
-charge is negative because of phosphate group

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10
Q

What is Chargaff’s rule

A

% purines (A + G) = % pyrimidine (C + T)
% A = % T and % C = % G

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11
Q

What did Watson and Crick do

A

Pieced together the clues to determine the structure of DNA
-antiparallel
-double helix
-purines are paired with pyrimidines
-exterior is hydrophilic (phosphate heads) and interior is hydrophobic (phosphate tails)

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12
Q

How does hydrogen bonding keep DNA intact

A

H-bonding between bases keeps the strands intact
3 h-bonds between G and C
2 h-bonds between A and T

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13
Q

What is nucleic acid hybridization

A

Annealing of single strands of DNA or RNA
Strands must be complementary in sequence and are highly specific

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14
Q

What is Watson and Cricks model of DNA replication

A

-complementary base pairing
-parental strands act as templates and can unwind by breaking the h-bonds between bases
-semi conservative replication

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15
Q

What are the differences between prokaryotic and eukaryotic chromosomes

A

Prokaryotic: have one circular chromosome sand other small independent circular DNA called plasmids in the cytoplasm
Eukaryotic: linear chromosomes and enclosed in the nucleus

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16
Q

What is a centromere

A

DNA sequences that are required for correct segregation of chromosomes by directing formation of the kinetochore

17
Q

What are the origins of replication

A

DNA sequences that initiate DNA replication

18
Q

What are telomeres

A

Sequences of DNA located at the ends of the chromosome that prevent degradation and allow proper replication of the chromosome ends
Because ends of DNA are very unstable

19
Q

What are histones

A

Basic positively charged proteins that DNA wind around
Only in eukaryotic cells since bacterial cells are much smaller and need DNA to be more compacted

20
Q

How can you tell the difference between a circular DNA and linear DNA

A

Cut the DNA in half, one fragment means circular DNA, two fragments means linear DNA

21
Q

What is euchromatin

A

Regions have lower DNA compaction and genes are actively expressed

22
Q

What is heterochromatin

A

Chromosomal regions of high DNA compaction where gene expression is silenced (no space for for enzymes to activate genes)

23
Q

Constitutive vs facultative heterochromatin

A

Constitutive: DNA is always highly compacted (centromeres and sub-telomeric regions)
Facultative: can switch to euchromatin depending on cells type and environment