Week 3 Flashcards
- Raised RDW.
- Blood film: Spherocytes, Howell-Jolly bodies, polychromatic cells
- What is the most likely diagnosis?
-Hereditary Spherocytosis
- Low Hb, Raised reticulocytes
- Raised WBC
- Blood film: red cell fragments, schistocytes, Heinz Bodies, bite cells
- What is the most likely diagnosis?
-G6PD deficiency
- Raised bilirubin, Raised ALT, Low Hb
- Raised RDW
- Coomb’s test -ve
- Blood film: anisocytosis, spherocytes, bite cells, polychromatic cells.
- What is the most likely diagnosis?
-Dapsone induced haemolysis (or just drug induced) //Bite cells: think oxidative haemolysis
What are the main psychosocial problems in children with Sickle Cell Disease?
- Emotional challenge: Coming to terms with the illness
- Cognitive impairment leads to educational problems, where extra support may be required
- Adherence to treatment is also a problem
-What is the location of the beta globin gene complex?
-Chromosome 11p15
-What is the location of the alpha globin gene complex
-Chromosome 16p13.3
What genes are involved in embryonic Hb production?
-Epsilon gene on the beta globin complex and the zeta 2 gene on the alpha globin complex
-What genes are involved in foetal Hb production?
-Ggamma and Agamma genes on the beta globin complex and the alpha 1 and 2 genes on the alpha globin complex
What are the normal ranges of HbA, HbA2 and HbF on High performance liquid chromatography (HPLC) in adults?
- HbA: 95.5-96.5%
- HbA2: 2.5-3.5%
- HbF: <1%
What are the most common kinds of mutations assocviated with the alpha genes and the beta genes?
- Alpha genes: deletions
- beta genes: point mutations
What are the 4 most common alpha thalassaemia mutations?
- -alpha3.7
- -alpha4.2
- __SEA
- __FIL
What variant haemoglobin is associated with delta-beta gene fusion?
-Hb Lepore
Once a sample has been taken for genetic testing, what methods are used to analyse the DNA?
- GAP-PCR
- MLPA (Multiplex ligation-dependent probe amplification)
- Real time PCR
What is thew structural change in Hb that causes HbS?
-Glutamic acid is substituted for Valine at amino acid 7
What is the structural change in Hb that causes HbC?
-Glutamic acid is substituted for Lysine at amino acid 7
What is the structural change in Hb that causes HbD?
-Glutamic acid is substituted for Glysine at amino acid 122
What is the structural change in Hb that causes HbE?
-Glutamic acid is substituted for Lysine at amino acid 27
What is the characteristic finding of Beta thalassaemia on HPLC?
-Raised HbA2, (and sometimes HbF)
What is the characteristic finding of Alpha thalassaemia on HPLC?
-Normal HbA2 and HbF
Outline how a GAP PCR is performed (In the context of alpha thalassaemia)
-Primers are set up for a specific gene: one forward primer, one close reverse primer and one very distant reverse primer
-In a normal gene, with no deletion, the forward primer and distant reverse primer form a product that relates to the size of the specific gene
-A deletion brings the distant primer closer to form a smaller product
-Visualising the product shows the specific size of a deletion when compared to a control/ normal gene.
-The size of the deletion is used to identify the mutation
(-e.g allows comparison of –alpha3.7kb and –alpha4.2kb deletions)
Give three examples of different types of mutation that can cause thalassaemia
- Mutations affecting transcriptional elements (e.g A mutation in the promoter regulatory elements)
- Mutations affecting RNA processing (e.g A mutation in the splice junction)
- Mutations affecting RNA translation (e.g A mutation in the initiation codon)
What molecular techniques are employed to detect point mutations (Such as in Beta thalassaemia)?
- Sanger sequencing
- RFLP (Restriction fragment length polymorphism)
- Allele specific/ARMS (Amplification-refractory mutation system)
What molecular techniques are employed to detect point mutations (Such as in Alpha thalassaemia)?
- GAP-PCR
- MPLA (Multiplex ligation-dependent probe amplification)
What molecular technique is employed in analysing unknown mutations?
-Next generation sequencing (NGS)