6.1 cellular control Flashcards

1
Q

define gene mutation

A

a change to the genetic material

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2
Q

When do mutations occur

A

they may occur spontaneously during cell replication before cell division

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3
Q

What can cause mutations

A

tar in tobacco smoke and ionising radiation such as UV light

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4
Q

When do gene mutations occur

A

during DNA replication

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5
Q

Describe the differences between mutations associated with meiosis and mitosis

A

Mutations associated with meiosis affect gamete formation and therefore offspring

Mutations associated with mitosis correlate with the development of cancerous tumours

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6
Q

Define point mutation

A

One base pair is substituted for another

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7
Q

Define indel mutations

A

One or more nucleotides are inserted or deleted from a length of DNA and may cause a frameshift

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8
Q

What are the types of point mutations

A

missense nonsense silent

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9
Q

Define silent mutations

A

A point mutation involving a change to a base triplet where that triplet still codes for the same amino acid so the primary and tertiary structures are not affected and neither is the function of the protein

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10
Q

Define missense mutation

A

a change in the base triplet sequence that leads to a change in the amino acid therefore affecting the primary and tertiary structure of a protein as well as its function

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11
Q

When do missense mutations not have a major effect on the function of the protein

A

The base triplet may code for an amino acid with similar r-group properties so it will not affect the tertiary structure and function too much

the amino acid may be located in an area that isn’t functionally important for example it isn’t near the active site in an amino acid

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12
Q

ne nonsense mutation

A

Apoint mutation may alter the base sequence so that it becomes a termination triplet

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13
Q

What does a nonsense mutation lead to

A

A truncated protein

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14
Q

Why do indel mutations lead to a severely disrupted amino acid base sequence

A

If nucleotide bases not in multiples of three are inserted or deleted from the gene, because the code is non-overlapping and read in groups of three, all the subsequent base triplets are altered.

the primary and tertiary structure of a protein will be severely altered and the protein will be unable to carry out its function and be degraded in the cell

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15
Q

Explain the problem with expanding triple nucleotide repeats

A

Some genes contain a repeating triplet such as -CAG CAG CAG- in an expanding triple nucleotide repeat the number of CAG triplets increases at meiosis and again from generation to generation.

Huntington diseasr results from this - it is hereditary

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16
Q

explain why not all mutations are harmful

A

Many mutations are beneficial and have helped to drive evolution through natural selection such as blue eyes

Some mutations appear to be neutral being neither beneficial nor harmful such as the inability to smell flowers

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17
Q

Describe the lac operon

A

a length of DNA that functions as a single transcription unit containing a promoter then operator region next to the structural genes

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18
Q

What is the function of the promoter region

A

RNA polymerase binds to it to begin the transcription of the structural genes

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19
Q

Describe the funtion of the regulator gene I

A

It codes for a repressor protein which binds to the operator preventing Rna polymerase to bind to te promoter region

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20
Q

Outline what occurs when E.coli is grown on glucose

A

B-galactosidase and lactose permease do not need to be made as it is a waste of energy and amino acids because the glucose can be respired

The regulatory gene codes for a repressor protein which binds to the lacO preventing RNA polymerase from binding to the promoter region so transcription doesn’t occur and mRNA isn’t made and translation doesn’t occur so the genes are off

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21
Q

What happens when E,coli is grown on lactose

A

The repressor proteins shape is changed when lactose binds to it so it can no longer bind t the lacO and RNA polymerase can bind to the promoter region so transcription and translation occur and the genes are on

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22
Q

What is the purpose of beta galactosidase

A

hydrolyse lactose to glucose and galactose

23
Q

What is the purpose of lactose permease

A

increase uptake of lactose

24
Q

Describe the regulation of gene expression in eukaryotes

A

RNA polymerase can only attach to the promoter with the help of a transcription factor which is a protein or a short strand of non-coding RNA

Once the transcription factor binds to the promoter region it will either make it easier of harder for RNA polymerase to bind activating or surpressing transcription

25
Q

Which transcription factor activates and surpreses transcription

A

surpress - Non-coding RNA
activate - protein

26
Q

Define introns

A

non-coding regions of DNA

27
Q

Define exon

A

Coding region of DNA

28
Q

What can introns be used as

A

Non-coding pieces of RNA - transcription factorn

29
Q

What do we call mRNA that hasn’t been spliced

A

primary mRNA

30
Q

How are many proteins activated

A

By being phosphorylated

31
Q

Describe how cAMP activated enzymes and stimulates transcription

A

A signalling molecule binds to a receptor and acitvates a g protein which activates adenyl cyclase enzymes which convert ATP to cAMP

cAMP activates PKA which catalyses phosphorylation of various proteins by hydrolysing atp in the process which may activate many enzymes, e.g. thos that convert glycogen to glucose

PKA may phosphorylate other proteins such as CREB which can enter the nucleus and act as a transcription factr

32
Q

Define apoptosis

A

programmed cell death

33
Q

How is apoptosis different to necrosis

A

Doesn’t release hydrolytic enzymes

34
Q

Describe the process of apoptosis

A

enzymes break down the cell cytoskeleton
the cytoplasm becomes dense with tightly packed organelles
the plasma membrane changes and small protrusions called blebs form
chromatin condenses, nuclear envelope breaks down and DNA breaks into fragments
The cell breaks into vesicles that are ingested by phagocytosis

35
Q

Why is apoptosis important

A

Important in tissue development, causes digits to seperate and removes ineffective or harmful t-lymphocytes

36
Q

What happens if there is too much apoptosis

A

cell loss and degeneration

37
Q

What happens if there is not enough apoptosis

A

Tumour development

38
Q

How is apoptosis controlled

A

By many cell signals including cytokines, hormones, growth factors and nitric oxide

39
Q

How does nitric oxide induce apoptosis

A

By making the inner mitochondrial membrane more permeable to H+ ions, dissipating the proton gradient
Proteins are then released into the cytoplasm where they bind to apoptosis inhibitors allowing it to occur

40
Q

Define morphogenesis

A

shape design

41
Q

Which genes cause morphogenesis

A

homeotic genes

42
Q

Describe homeotic genes

A

Subset of homeotic genes are called homeobox genes which contain a 180 base pair length homeobox

43
Q

What type of gene is the homeobox

A

Highly conserved

44
Q

Define conserved genes

A

Genes that have remained unchanged throughout the evolution of different descendant species

45
Q

What does the homeobox sequence code for

A

A specific sequence of 60 amino acids within the synthesised protein called the homeodomain

46
Q

Describe the structure of the homeodomains

A

Consists of 3 alpha helices and the 2nd and 3rd helix create a helix-turn-helix

47
Q

What is the role of the H-T-H in the homeodomain

A

The H-T-H shape allows the protein to bind to the DNA and act as a transcription factor

48
Q

What are hox genes

A

Homeobox genes found in bilateral animals and are involved in the correct positioning of body parts

49
Q

How are hox genes arranged

A

In clusters

50
Q

What happens if a hox gene is mutated

A

Body part end up developing in the wrong pace on the body - homeotic mutations

51
Q

How are hox genes expressed

A

Expressed in early embryonic development along the head-tail axis
spatial linearity and expressed in temporal order - head to tail

52
Q

Define spatial linearity

A

The order of the genes matches expression pattern along embryo

53
Q

Define collinearity

A

Spatial and temporal arrangement of hox genes so they are expressed head to tail