Lecture 6: Cell Signaling - Exam 5 Flashcards

1
Q

What is endosomal recyling?

A

Recycle cellular components for reuse at the plasma membrane (energy efficiency). Rab11 is apart of this endosomal recycling.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What is the most studied form of endocytosis?

A

Clathrin-Mediated Endocytosis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

General signaling: How signals are transduced between inducer and responder. 4 ways & examples here.

A

1) In the head: normal induction of lens by optic vesicle. Normal. Have eye cells and eye receptors present.
2) In the head: optic vesicle cannot induce ectoderm that is not competent. We cut eye cells out and put them in a different place. Does not work, nothing happens. Tells us no eye receptor here.
3) Optic vesicle is removed; no lens is induced.
4) Tissue other than optic vesicle is implanted ; no induction occurs. No specific receptor here for this tissue.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

The case of “Two heads are better than one”

A

In 1920, Proscholdt was intrigued by the observation that cells of the dorsal blastopore lip (DBL) are the first to show sign of differentiating in the salamander gastrula, so she set out to understand how the embryonic axes get organized. She transplanted DBL cells from one side of one embryo to the opposite side of another embryo.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

The dorsal organizer

A

Induces ventral belly to become dorsal neural and muscle cells.
Organizes host and donor tissue into a secondary embryo with clear anterior-posterior and dorsal-ventral axis.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

With the dorsal blastopore lip (DBL) transplant, what was the result?

A

Siamese twins. Two DBLs and two opposing heads were produced.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Which is not an aspect of morphogenetic signaling?
a. a concentration gradient of some factor
b. cell proliferation
c. changes in gene expression

A

These are all an aspect of morphogenetic signaling

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

The DBL is the only ___________ tissue in the early gastrula. It is capable of…?

A

self-determined ; it is capable of organizing the cells around it.
Dorsal lip cells became known as the organizer

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are the two components of every inductive interaction?

A
  1. The inducer AKA the tissue that produces the signal (or signals) that changes the cellular behavior of the other tissue. These cells are mostly secreting proteins (ligands) that influence the transcription of genes in surrounding cells.
  2. The responder is the cell or tissue being induced. THIS CELL MUST HAVE THE RECEPTOR FOR THE LIGAND AND THE ABILITY TO RESPOND TO THE SIGNAL = COMPETENCE
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What are the scaffolding proteins in the Wnt pathway?

A

APC and Axin
Scaffolding means it is a structural protein that brings other things to places.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is GSK3 in the Wnt pathway?

A

An active kinase.
It phosphorylates B catenin.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

With no Wnt, is there transcription?

A

No

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Wnt loss of function in frog: Wnt is required for posterior development. Discuss at least two ways that you think scientists could have caused these phenotypes.

A

Could add a phosphatase to dephosphorylate B-catenin.
Mutations in APC or in the complex (or in GSK3) to not have B catenin phosphorylated and then this would cause cancer because we would have overexpression.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Antibody staining tells you..?

A

Where and when a protein exists in a cell or EC matrix.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Describe an overview of delta notch signaling.

A

Very ancient: present in sponges.
A simple way to make some cells in a sheet of cells different from the others and form boundaries.
Often used to make binary decisions between cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Describe the mechanism of notch signaling.

A

Notch serves as a receptor for direct cell-cell signaling by transmembrane proteins (e.g. Delta) on neighboring cells.
The binding of Delta leads to proteolytic cleavage of Notch by y-secretase.
This releases the Notch intracellular domain, which translocates to the nucleus and interacts with the CSL transcription factor to induce gene expression.

16
Q

Delta-Notch signaling. There are different ways it can work. What are two ways?

A

Lateral inhibition and induction.
Lateral inhibition : Two cells send similar signals, randomly one cell starts to send a stronger signal, the receiving cells adopts a different fate.
Induction: One cell induces another cell to change fate = often a binary fate decision.
However, in each case only adjacent cells will receive the signal.

17
Q

Before notch signaling is activated, what acts as a transcriptional repressor?

A

CSL transcription factor. HDAC is bound to it CSL.

18
Q

Does the cell have a skeleton?

A

Yes!
The components are very highly organized and reside in well defined regions of the cell.

19
Q

What are the cytoskeleton functions?

A

-Lends architecture and support
-Provides framework for: positioning of membranous vesicles, compartments and even organelles, directing movement of materials, and cell polarity.
-Provides machinery for movement of cell
-Plays an important role in cell division

20
Q

What is the cytoskeleton?

A

Polymer network of filamentous, proteinaceous structures
These are the components of the cytoskeleton:
-microfilaments (actin)
-microtubules (alpha and beta-tubulin)
-intermediate fibers (~70 proteins in humans: keratin, desmin, neurofilaments, lamins).

21
Q

What compartment of the cytoskeleton is the smallest?

A

Actin (7-9nm)
(microtubules are 25 nm)
(intermediate filaments are 10nm)

22
Q

What are the methods for study of the cytoskeleton?

A

Microscopy:
-Fluorescence
-Video
-Electron
Drugs, mutations, KO and KD in model animals/plants

23
Q

What are some dynamic features of the cytoskeletal elements?

A

-Capable of collapse and reorganization
-Capable of stable limited “fixed” structure
-Regulated by sensing intracellular and extracellular signals

24
Q

What is actin?

A

-A globular protein - 375 amino acids at 43 kDa
-Most highly conserved of the cytoskeletal proteins
(yeast actin is 90% homologous to mammalian)
(across all organisms, at least 40% homology)
-About 5-20% of cellular: most abundant of the cytoskeletal proteins
-Responsible for vast number of cellular activities

25
Q

Describe the growth of actin.

A

-Polymerizes to form 2-stranded filament; growth is ATP dependent
-Slow hydrolysis results in treadmilling
-Is and regulated by a very large diversity of actin binding proteins (ABPs), like formins and Arp 2/3 (Actin related protein)

26
Q

What are the three phases of actin polymerization? Explain them.

A

Nucleation phase
-seed–three monomers of G-actin
Elongation phase
-High concentration of ATP G-actin, monomers added to both ends until equilibrium between G- and F-actin.
Steady state phase
-G-actin monomer exchange at ends, but no net charged in total mass of filaments

27
Q

What is critical concentration (Cc)?

A

For all three phases, free monomer (G-actin) concentration at which filaments form is called critical concentration.
(Not enough G-actin, then not a good chance they interact)
-Below it, they do not form, above it they form
-At steady state, concentration of G-actin remains at Cc

28
Q

What are microfilaments composed of? What do they form? What do they resemble? Describe their polarity.

A

They are composed of globular actin monomers (globular, or G-actin)(43 kDa)
They form linear polymers (filamentous, or F-actin) (~7nm diameter)
Polarity:
F-actin + myosin head – arrowhead appearance
-Barbed end – plus end
-Pointed end – minus end