2.1: Cell structure and function -The Cell Envelope Flashcards

(34 cards)

1
Q

what does the bacterial cell envelope consist of? describe each component, what is the most important part

A
  • Cytoplasmic membrane -thin structure that surrounds the cell, highly selective semi-permeable barrier that separates cytoplasm from outside environment.
  • Cell wall -rigid layer that confers structural strength.
  • Periplasm- space between the cytoplasmic membrane and the outside of the cell wall.
    -most important: the cytoplasmic membrane, no such thing as cell without it.
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2
Q

what does the cytoplasmic membrane being highly selective and semi-permeable do?

A

-it enables concentration of specific metabolites (which can’t escape through membrane) and excretion of waste products (which can go through membrane).

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3
Q

describe the cytoplasmic membrane structure

A
  • Composed of a phospholipid bilayer -phospholipids contain both hydrophobic (fatty acid tails), and hydrophillic (glycerol-phosphate) regions.
  • Bacterial membranes contain ester phospholipids
    which consist of:
    -1 glycerol backbone
    -2 fatty acid tails
    -1 phosphate and a variable side chain (head group)
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4
Q

what does amphipathic mean?
how do phospholipids exhibit this?

A

Has both polar and non polar characteristics.
ex: due to amphipathic nature, phospholipids in water naturally aggregate to form bilayers.
-fatty acid tails point inward - form hydrophobic, non polar core.
-head groups remain exposed to water in outside environment -hydrophillic, polar.

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5
Q

what’s an ester bond? which organisms have it

A
  • ester because fatty acid attached by carbon attached to O, and double bonded O.
  • bacteria and eukarya have it
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6
Q

the phospholipid bilayer forms how many layers of _ to_ nm thick, visible using _

A

2 layers, 8-10 nm, thick, visible using TEM.

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7
Q

what’s a true unit membrane

A
  • membrane that consists of two layers aka bilayer.
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8
Q

where are integral membrane proteins, what keeps them there?

A
  • Firmly embedded in the membrane, amphipathic nature keeps it in place, takes no energy
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9
Q

where are peripheral membrane proteins located

A
  • loosely associated with the membrane
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10
Q

peripheral membrane proteins may have a lipid portion called _

A

lipoproteins

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11
Q

peripheral membane proteins may interact with _

A

integral proteins

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12
Q

different membrane proteins often ….. to carry out a function

A

group together in clusters

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13
Q

describe the fluid mosaic model of the membrane

A

the cytoplasmic membrane exists in a semi-fluid state
-lipids in the outer leaflet are different from lipids in the inner leaflet ex: different head groups and fatty acid tails
-integral proteins can move laterally, but do not flip-flop sides (as polar hydrophillic ends do not want to move through hydrophobic middle region)
-overall composition may change to suit conditions

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14
Q

whats the difference in ETHER bonds compared to ester? what organisms have ether bonds?

A
  • no double bonded O
  • archaea have ether bonds
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15
Q

what’s are the differences in the tails of arachael phospholipids

A
  • instead of fatty acid tails, they have hydrocarbon tails made of repeating units of isoprene
  • some archael membranes are made of **glycerol diether ** phospholipids with long branched tails -phytanyl
  • other archael membranes are made from diglycerol tetraether phospholipids

most archael tails are branched eukaryotes and bacteria’s are not

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16
Q

describe diglycerol tetraether phospholipids (which some archael membranes are made from)

A
  • two phospholipids joined by the tails
  • makes the inner and outer faces of the membrane
  • forms a lipid mono-layer (since the tails connected all one)
17
Q

in contrast to lipid bilayers, lipid monolayer membranes are _. so monolayers are commonly found in __ __.

A

extremely heat resistant
-commonly found in hyperthermophilic archaea (grow best in temps above 80 C

18
Q

what are the 3 main membrane functions

A
  • permability barrier - Nutrient and waste transport, small non-polar can diffuse across, large or polar must be moved by transport proteins
  • protein anchor - holds proteins in place
  • energy conservation -generation of PMF (gradient of protons across membrane) -since prokaryotes don’t have mitochondria or chloroplasts, membrane does this.
19
Q

small non-polar molecules can cross membrane through __ __

A

passive diffusion (high to low conc)

20
Q

can large polar and charged molecules need _ _ to cross membrane

A

they need transport proteins bc they cannot just diffuse across membrane.

21
Q

how do integral membrane proteins work? (Facilitated diffusion)
what’s an example of one?

A
  • allow specific molecules to diffuse across CM
  • follow usual rules of diffusion:
    -solutes move from high to low
    -no extra energy is required
  • simply speeds up the rate of diffusion for molecules that would not easily cross the membrane otherwise.
  • ex: E. coli’s aquaporin, allows H2O to diffuse into or out of the cell
22
Q

describe how transport proteins work in active transport

A

Transport proteins work to accumulate solutes against a concentration gradient.
* requires input of energy
* moves solutes from area of low conc. (outside cell) to area of higher conc. (inside)
* allows solute conc. sufficient for biochemical processes
* highly specific -transport protein usually carries only a single kind of molecule
* subject to saturation effect

23
Q

active transport is subject to the saturation effect, what is this

A

when the transporter is saturated already bringing in material as fast as it can, the rate of solute entry will level off at this point.

24
Q

what are the 3 types of active transporters

A
  • simple transporters - a single membrane spanning transport protein
  • group translocation - a series of proteins carrying out the transportation event, and modifies the substrate, as it is brought into the cell (for accumulating solutes against concentration gradient).
  • ABC transportation systems - use a substrate binding protein, a membrane transporter and an ATP hydrolyzing protein.
25
what is the energy source for simple transporters?
The proton motive force
26
what is the energy source for group translocation?
Phosphoenolpyruvate (donates a phosphate to substrate to modify it)
27
what is the energy source for ABC transportation systems
ATP
28
how does a symport work? whats an example of one?
* two molecules move in the **same direction** across the membrane * movement of one molecule (down gradient) provides the energy required to move the other molecule (against its gradient) * ex: E. coli's lactose permease. -transports lactose and H+ into cell at same time. -energy is store in the proton gradient and used to transport the lactose into cell.
29
how does an antiport work? example?
* two molecules move in **opposite directions** across the membrane * movement of one molecule provides the energy required to move the other molecule * ex: E. coli's sodium transport system. -allows a H+ to move into cell, while pumping out an Na+ ion. -energy supplied by the H+ gradient.
30
what's a group translocation example? describe how it works
E. coli's phosphotransferase system (PTS), * phosphoenolpyruvate (PEP) donates a PO4^3- group to a phosphorelay system. * the PO4^3- moves through a series of protein carriers, and is eventually deposited onto a sugar, as its brought into the cell * the sugar is chemically modified, so it is no longer gluclose and unmodified glucose conc inside is now 0. and more glucose can keep coming in, moving down gradient. ## Footnote phodphoenolpyruvate is used as an energy source, releasing energy when it donates phosphate.
31
what does ABC stand for in ABC transporters
ATP, BINDING, CASETTE
32
describe how ABC transporters work?
* Periplasmic solute binding protein binds to a specific substrate in the periplasm and carries it the membrane for transport (high substrate specificity) * Integral membrane protein transports substrate across the membrane * ATP binding protein hydrolyzes ATP to power transport. (2ATP becomes > 2ADP + 2P(i))
33
what is ABC transport used for
* to transport some sugars, amino acids, inorganic nutrient (SO42-, PO43-) and trace metals
34
what does ABC transporters allow for?
* allows for concentrating substrates inside the cell, even when conc. outside is extremely low (ex. < 1 um) * many bacteria can grow in environments that seem to be devoid of nutrients because of this! (extremely good at harvesting nutrients)