Lecture 2 & 3: Bacteria Flashcards

1
Q

Distinguishing characteristics of Bacteria (prokaryote)

A
  • Cell wall: present except for mycoplasma
  • Cytoplasmic membrane: no sterols except mycoplasma
  • nuclear membrane: absent
  • nucleolus: absent
  • Hereditary info: ssDNA w/ no proteins associated
  • Ribosomes: small 70s
  • respiration: associated particles in cytoplasmic membrane
  • repro: asexual (binary fission)
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2
Q

Congenital infections

A
  • Sexual disease: T. Pallidum
  • GI disease: L. monocytogenes
  • viral causes: rubella
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3
Q

Exogenous sources of microbial disease

A

Ingress

  • Inhalation: common cold (viruses), coccidioidomycosis (fungus)
  • Ingestion: dysentry (bacterium)

Penetration

  • Wound: surgical infections & cat scratch (bacteria)
  • insect bites: encephalitis (virus)
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4
Q

Cell arrangement: Coccoidal

A
  • pairs: diploccoci (Strep. pneumoniae)
  • chains: streptococci (Strep. pyogenes)
  • clusters: staphylococci (all staphylococcus sp.)
  • tetrads: Sarcina sp.
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5
Q

Types of stains

A
  1. Gram-stain (stain -> decolourizer -> counterstain)
  2. Acid Fast stain:
    - for Gram’s resistant bacteria ex. mycobacterium & Nocardia spp.
    - Ziehl-Neelsen (hot), Kinyoun (cold), fluorochrome (auramine-rhodamine; primary stain: fluorescent dyes; counterstain: potassium permanganate)
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6
Q

Flagellum arrangement

A

Polar

  • monotrichous: Ex. Vibrio sp.
  • Amphitrichous: Ex. Spirillum sp.
  • Lophotrichous: Ex. Pseudomonas sp.

Lateral

  • Peritrichous: Ex. Proteus sp.
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7
Q

Cell envelope components

A
  1. Glycocalyx (aka capsule, slime (s-) layer
    - External mucilaginous layer (EPS) Ex. Bacillus anthracis (polypeptide)
    - slime layer: poor organisation
    - capsule: organised, K antigen (Exceptions: M - S. pyogenes, Vi -Salmonellae)
    - Fx: adherence, antigenic activity, antiphagocytic, prevention of neutrophil killing of engulfed bacteria, prevention of PMN leukocyte migration to site of infection, toxicity to host cells, protection
  2. Cell wall - Peptidoglycan backbone - alternating polysaccharide chains alternating NAM & NAG
    - Gram +ve: thick peptidoglycan; Teichoic acids (Fx: bind protons, cations, act as adhesins, virus receptor sites); Lipoteichoic acid (dermal necrosis/Schwartzman rxn, induction of cell mitosis at site of infection, immune system stimulation, complement activation)
    - Gram -ve: thin peptidoglycan; LPS; porins (nutrient transport)
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8
Q

Endotoxin induction of:

A
  • fever
  • haemorrhagic necrosis (Schwartzman rxn)
  • disseminated iv coagulation
  • production of TNF
  • activation of alternate complement pathway
  • stimulation of bone marrow cell proliferation
  • enhancement of the immune and limulus lysate rxn
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9
Q

Acid-Fast Bacteria

A
  • Genera Mycobacterium & Nocardia
  • Peptidoglycan + arabinose & galactose polymers -> mycolic acids (waxy)
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10
Q

Effect of lysozyme

A
  • breaks Beta1-4 bonds b/w NAM & NAG
  • spheroplast: portion of cell wall remains because lysozyme only enters in portion of cell wall with porins
  • protoplast: cell wall completely removed (Gram +ve more sensitive) due to lack of 2nd layer of cell wall
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11
Q

Effect of penicillin

A
  • prevents cell wall formation only in growing cells (no effect on Mycoplasma)
  • inhibits formation of nl cross-linkages in peptidoglycan
  • binds irreversibly to penicillin-binding proteins (PBP transpeptidases)
  • result: defective cell walls
  • no protection from osmotic shock
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12
Q

Periplasmic space contains:

A
  • nutrient transport proteins
  • nutrient acquisition enzymes (proteases)
  • detox enzymes (Beta-lactamases)
  • membrane Derived Oligosaccharides (MDO)
  • Osmoprotectants
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13
Q

Pathogenicity Islands (PAI)

A

Distinct genetic elements on chromosome:

  • virulence genes
  • present only in pathogen genome
  • occupy large genomic areas (10-200 kb)
  • differ from core genome (base composition & operon useage)
  • frequently located next to tRNA genes
  • frequently associated with mobile genetics elements (transposons)
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14
Q

Ex. of pathogens with PAI

A

Grav +ve

  • Listeria spp.
  • S. aureus
  • Streptococcus spp.
  • Enterococcus faecalis
  • C. diff

Gram -ve

  • H. pylori
  • E. coli
  • Salmonella spp.
  • Shigella
  • Yersinia spp.
  • L. pneumophilia
  • P. auruginosa
  • V. cholerae
  • Bacteroides fragilis
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15
Q

Endospores

A
  • 2 bacterial genus produce spores: Botulinum and Bacillus
  • Specialised structures: produced in env. stress for spore to survive harsh conditions
  • Resistant: UV, irradiation, chemical disinfection, drying
  • require specialised stains (light microscopy)
  • Coat: keratin-like, impermeable layer (resistance to antibacterials)
  • Cortex: type of peptidoglycan (fewer cross-links)
  • Spore wall: peptidoglycan layer; cell wall germinating vegetative cell
  • Core: contains complete genetic material
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16
Q

Bacterial shapes

A
  • Spherical: Cocci
  • Cylindical: Bacilli; Ex. B. perfringens (short & stubby)
  • Curved: Vibrio (do not confuse with Vibrio cholera)
17
Q

Flagellum made of 3 parts

A
  1. Helical filament
    - Flagellin: highly antigenic (H antigen)
    - inserted into hook
  2. Hook: anchors filament into basal body
  3. Basal body:
    - contains rod and 1 or 2 sets of double plates (rings)
  • located in cytoplasmic membrane & cell wall
  • Gram -ve flagellum have 4 rings (L, P, S & M rings ) &

Gram +ve have 2 rings (S & M rings are for both)

18
Q

Peptidoglycan layer

A
  • Tetrapeptide on NAM; D-alanine always the 4th a.a.
  • Cross-linkage occurs on 3rd a.a. of one tetrapeptide to the 4th a.a. of an adjacement tetrapeptide
  • Gram +ve cross-linkage is via
    Penta-Glycine bridge; more than 90% is cross-linked; 3rd a.a. is always L-Lysine
  • Gram-ve crosslinkage is a lipoprotein bridge b/w Diaminopimelic acid of one tetrapeptide to the D-alanine of another tetrapeptide; <60% cross-linked
19
Q

Examples of bacteria with Lipooligosaccharide (LOS)

A
  • Bordetalla pertussis
  • N. meningitidis
  • C. jejuni
  • Some endotoxins have LOS instead of LPS subunits; both stimulate immune system
20
Q

LPS structure

A
  • only in Gram -ve bacteria
  • endotxin
  • O-antigen
  • core polysaccharide
  • Lipd A (fatty acids): toxic
21
Q

Comparison of Gram +ve & -ve cell walls

A

Gram +ve

  • Peptidoglycan
  • Teichoic & Lipoteichoic acid
  • Activation of both classic and alternate complement pathway
  • Activation of both specific and non-specific immune response
  • Dermal necrosis
  • more sensitive to penicillin b/c cell wall are thicker w/ more cross-linkages.

Gram -ve

  • LPS
  • Lipoprotein
  • Peptidoglycan
  • Porins
  • Endotoxin induction of: alternate complement pathway, etc… (see other card)
  • Haemorrhagic necrosis
22
Q

Pilus features

A
  • hollow & helical, thinner than flagella
  • protein composition is Pilin (classification & iD)
  • F-Pilus (sex pilus) Gram -ve bacteria only
23
Q

Fimbriae

A
  • Type I pili
  • adhesion to surfaces
  • predominantly Gram -ve, some Gram +ve (Corynebacterium renale, Actinomyces naeslundii)
24
Q

Axial filaments aka Endoflagellum

A
  • Spirochetes - Leptospira lack flagella but are motile
  • possess axial filaments instead: long thin microfibril inserted into a hook
  • entire structure enclosed in periplasmic space (not exposed to external environment)