3 Flashcards
(84 cards)
where do you get URTIs and where do you get LRTIs
give examples of each type of infection
URTIs are infections above the epiglottis in the nose or pharynx. For example nasopharynogitis (cold) and pharyngitis (sore throat) and laryngitis (croaky voice).
LRTIs are infections in the airways such as the trachea, bronchi and alveoli
For example influenza, bronchitis, tuberculosis and pneumonia.
how does spiking in influenza, RSV and colds change through the year
why are there more cases of colds in the present day
there is a spike of influenza every winter but the severity changes each year
there is a spike of RSV each winter but the severity is constant
rhinovirus is present all year round but more so in winter
our ability to detect viruses has improved so there seems to be more cases. This has come with the discovery of PCR which can help to detect viruses but it needs the primer to do this.
what are two other ways, which are not PCR, to detect viruses and evaluate their success
high throughput screening if effective but expensive
virocaptive sequencing for vertebrate viruses allows screening for a huge amount of viruses and there is no need for primers.
who catches RSV and how common is it
what is it a major cause of in infancy and why can you catch it twice
60% of children will catch RSV in their first winter and nearly all children will have by 2-3 years.
it is a major cause of low RTIs in infancy and childhood
you can be infected by it multiple times and it mutates.
what are the first symptoms of RSV and who is most likely to show the more severe symptoms
who else can RSV infect
severe cold, but in 2-3% of babies they will develop severe bronchiolitis, this will most likely happen to premature babies due to their underdeveloped lungs.
RSV protective immunity decreases over time so can infect older people with cardiovascular morbidity, COPD or immunocompromised patients where their reaction may be more severe
what is our immune system like when we are born and how does this affect our ability to handle RSV
how does this change as we grow up
what happens to those that developed severe RSV
when we are born we have a less mature immune system (Th2) so we are less able to handle the virus and development of RSV bronchiolitis is more likely.
As we grow the immune system develops to Th1 and we only get colds.
children that got RSV bronchiolitis are more likely to develop post bronchiolitic wheeze and go onto develop asthma
as we become older it is a cause of exacerbations in people with asthma and COPD and as our immune system declines with age we get more severe illness.
what do enveloped viruses do
what is the g protein on the envelope and what can it attach to
how do viruses gain entry into the cell
takes components of our cell membrane to make its own envelope
the G protein is a highly glycosylated attachment protein and the potential receptors are found on our cells (annexin II on airway epithelial cells and L selectin and CX3CRI on immune cells).
to gain entry into the cell the virus will use F (fusion) protein.
what family and category is RSV
what receptors can RSV be detected by
negative sense ssRNA virus of the paramyovridae family
it can be detected by many PRRs- TLR2, 4, 6 which will bind to the F protein .
TLR7 binds to the ssRNA and so does NOD2.
what detects RSV and what processes happen following this in the body
how does the body try and limit the infection
what happens when dendritic cells are infected
TLRs and RIGI recognise the cell is under attack.
this will result in release of inflammatory mediators, and interferons will feed back onto the cell and neighbouring cells to cause apoptosis of infected cells.
CXCL8 causes neutrophil recruitment
CXCL10 causes natural killer cell recruitment
dendritic cells migrate to the lymph nodes when infected with RSV and present the antigens to T cells which cause RSV specific antibodies and cytotoxic T cells to get rid of the virus and create immune memory
how can RSV prevent an effective host immune response
6 things and think about the diagram
Non structural proteins/n proteins on the RSV can bind to RIGI and prevent its signalling.
They can also bind to IRF3 and 7 which stops them from binding to targets in the nucleus (NFKB) and this will prevent type 1 interferon production.
The non structural proteins can bind to STAT2 which causes its degradation so it cannot go onto activate interferon stimulated genes
F protein binding can be prevented
Many G proteins are released from infected cells and binds to CX3CRI on dendritic cells and T cells to prevent their activation. They can also bind to antibodies and stop their interaction.
N protein can inhibit synapse formation between T cells and dendritic cells or it can inhibit dendritic cell maturation
which cells are affected by the RSV and what happens to them
airway epithelial cells are highly permissive to RSV.
the replication of RSV causes epithelial damage and necrosis.
there is also the recruitment of neutrophils and lymphocytes
submucosal oedema
mucus secretion
bronchoconstriction
these cause severe obstruction of the airway lumen.
what happens to a monolayer of epithelial cells in a dish when RSV is added
why is this reaction more severe
huge gaps will appear in the monolayer and syncitia will form (cells infected with the virus will fuse together and form big elongated cells)
There are no immune cells in the lab so the effects will be more severe
what was used in the first vaccine for RSV and what results did it have
how is RSV normally detected
why did the first RSV vaccine fail
they used an inactivated version of the virus and the results showed no protection against the infection and it even caused a higher viral load than before.
normally RSV is detected by TLR4 on the cell surface and it enters the cell and its replication is detected by RIGI and MDA5. TLR7 will also recognise the single stranded RSV RNA.
This will lead to TF activation and antibody production,
But because the vaccine was inactivated it was still able to activate the TLR4, but it could not enter the cell and replicate so there was no TF activation or antibody production and so the people didn’t have an immune response.
what is a known treatment for RSV
monthly injection of anti RSV F protein monoclonal antibody called palivizumab which can be successfully given to infants at risk but it is very expensive
how does severe bronchiolitis affect the immune response polarisation
it will alter the Th1/Th2 response and cause Th2 polarisation and enhances sensitisation to allergens and induces development of a chronic asthma phenotype
how can genetics affect your risk of RSV severity
20% of the variation in risk for RSV is determined by genes but there are no confirmed genes so far.
TLR4 mutations 299 and 399 are over expressed in infants hospitalised for RSV bronchiolitis
the mutations cause a failure of TLR4 to translocate to the cell surface and this will mean there’s reduced NFKB signalling
comparing RSV and rhinovirus…
inducer or trigger?
when do people get infected?
RSV is an inducer of wheezing and asthma
rhinovirus is a trigger
rhinovirus is all year round and RSV is winter.
what is the most common cause of UTRIs
but what else can this cause
what is croup
rhinovirus
exacerbations, asthma development, severe bronchiolitis in infants, fatal pneumonia in the elderly and immunocompromised
barking cough
what type of virus is HRV
what receptors allow it into the cell and how many of each use each type of receptor
non enveloped single stranded virus, it is small and positive ssRNA
there are three receptors that allow the virus into cells and the virus can be categorised based on the receptors it uses or genetically.
96 major viruses use ICAM1 (intracellular adhesion molecule 1)
12 minor viruses use LDL receptor
50 C viruses use CDHR3 to enter and cause severe illness.
what are the different genes for HRV and how many serotypes do they have
what receptors do these use
HRV-A have 77 serotypes (ICAM and LDL)
HRV-B have 30 serotypes (ICAM)
HRV-C around 50 serotypes (CDHR3)
which causes more damage to airways RSV or HRV
RSV causes more damage
how does HRV replicate
it enters and replicates within the airway epithelium cells.
the cells are sloughed due to HRV but the airway lining remains structurally intact.
HRV will interact with TLR3 which up regulates RIGI and cause the release of chemokine and cytokines.
what do macrophages release
What are neutrophils attracted by and what can the levels of them tell you, what do they release
TNFA, IL1, CXCL8, MIP1A/CCL3, INFA,B,Y.
IL8/CXCL8.
levels of neutrophils in the nasal lavage fluid can correlate with the severity of the symptoms.
neutrophils release TNFA and make elastase.
what are eosinophils recruited in response to
what are T cells recruited in response to and what do they trigger
RANTES/CCL5
RANTES/CCL5 and IPI0/CXCL10. they trigger the antibody mediated response.