Unit 1: DNA Enzymes Flashcards

1
Q

what is the genome?

A

The compete complement of genetic information of an organism

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2
Q

what are exons?

A

unique sequence of DNA that actually codes for proteins

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3
Q

what are introns?

A

remaining DNA used as spaced DNA between genes and within genes. they make genes larger to be able to code them

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4
Q

what are introns necessary for?

A

regulate gene expression and generate new protein molecules during evolution

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5
Q

what are the three approaches to sequencing the genome

A

genetic mapping
physical mapping
DNA sequencing

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6
Q

what is polymerase?

A

catalyses the condensation of DNA and RNA nucleic acid polymers, formation of phosphodiester bonds between a nucleotide in a newly synthesised strand

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7
Q

what is a primer?

A

a short sequence of polymer complementary to the start of the template strand that initiates polymerisation

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8
Q

what is Taq polymerase?

A

a thermostable DNA polymerase for PCR and DNA sequencing that withstands temps to 95°C.

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9
Q

what is DNA ligase?

A

catalyses the condensation of phosphodiester bonds between two strands of nucleic acid polymer. join sugar-phosphate backbone between DNA fragments

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10
Q

what is endonuclease?

A

catalyses the hydrolytic cleavage degradation of phosphodiester bonds

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11
Q

why is restriction endonuclease different from endonuclease?

A

they are restricted to make the cut only between specific sequences of nucleotide bases

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12
Q

how are blunt ends produced?

A

when restriction enzyme cuts straight across the DNA strand breaking the two phosphodiester bonds opposite one another

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13
Q

how are sticky ends produced?

A

restriction enzyme makes a staggered cut in DNA hydrolysing a phosphodiester bond on each strand several base pairs apart

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14
Q

what is an advantage of a blunt end?

A

they can be joined to any other blunt edge fragment

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15
Q

what are the advantages of sticky ends?

A

DNA fragments with sticky ends will hybridise with other DNA fragments produced by the same restriction enzyme but not with fragments produced by different restriction enzyme

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16
Q

what are plasmids?

A

small loops of DNA

17
Q

why are plasmids useful?

A

as vectors for the movement of genes between cells in lab or to manufacture recombinant DNA
to transform prokaryotic cells to produce useful proteins - insulin, growth hormone
store as a library of DNA fragments

18
Q

what is a Ti plasmid?

A

vector to transform eukaryotic plant cells

19
Q

why if cut with same restriction enzyme can two fragments be sealed?

A

same sticky ends with complementary ends are produced