BIOCHEM Flashcards

1
Q

Glycolysis Rate Limiting Enzyme

A

PFK 1

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2
Q

Glycogenesis Rate Limiting Enzyme

A

Glycogensynthase

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3
Q

Glycogenolysis Rate Limiting Enzyme

A

Glycogen Phosphorylase

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4
Q

Gluconeogenesis Rate Limiting Enzyme

A

Fructose 1-6 bisphosphate

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5
Q

PPP Rate Limiting Enzyme

A

Glucose 6 phosphate dehydrogenase

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6
Q

Citric Acid Cycle- Krebs- TCA Cycle Location & Main Function

A

Mito matrix. Purpose: Oxidation of acetyl CoA to CO2 and water. Produces NADH and FADH2.
* Doesnt require O2 but wont occur anaerobically because NADH and FADH2 will inhibit

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7
Q

Acetyl Co-A

A

Contains High energy thioester bond used to drive other rxns upon hydrolysis

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8
Q

Pyruvate dehydrogenase complex location and enzymes

A

Mitochondrial Matrix
1- Conversion of pyruvate to acetyl coA ( pyruvate dehydrogenase, dihydropropyl transacetylase, dihydrolipoyl dehydrogenase)
2 Regualtion of PDH ( pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase)

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9
Q

In the PDH complex, PDH oxidizes ___ to create CO2. it Requires ___ and ____

A

Pyruvate TPP and Mg2+

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10
Q

In the PDH complex, dihydropropyl transacetylase oxidizes ____ using lipoic acid. It transfers the resulting acetyl group to coA

A

remaining two c molecule

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11
Q

In the PDH complex, dihydrolipoyl dehydrogenase uses ____ to reoxidize lipoic acid forming ______ which can later transfer e- to NAD+ , forming NADH that can go into ETC

A

FAD, FAD2

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12
Q

PDH complex:

PDH kinase phosphorylates PDH when ___ and ___ are high to turn it off.

A

ATP or Acetyl CoA

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13
Q

PDH complex:

PDH phosphatase dephosphorylates PDH when ____ is high to turn it on

A

ADP

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14
Q

5 Ways Acetyl CoA can be produced

A
Glycolysis- PDH complex
Fatty acid oxidation (beta oxidation)
Amino Acid Catabolism
Ketones
Alcohol
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15
Q

Glycolysis:

Glucose —-> Glucose 6 Phosphate

A

Enzyme: Hexokinase ( in peripheral tissue) Glucokinase (in liver, insulin responsive). ATP consumed. Mg2 cofactor, Irreversible (traps glucose in the cell)

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16
Q

Glycolysis:

Glucose 6P—-> Fructose 6-P

A

Isomerase

17
Q

Glycolysis:

Fructose 6P—–> Fructose 2,6 Bisphosphate

A

PFK 2. Insulin up regulates and Glucagon decreases. PFK 2 stimulates PFK1 and ATP is consumed

18
Q

Glycolysis:

Fructose 6P—-> Fructose 1,6 Bisphosphate

A

PFK-1 (upregulated by PFK2 and AMP). Downregulated by ATP and Citrate. ATP is consumed, irreversible and RATE LIMITING STEP

19
Q

Glycolysis

Fructose 1,6 Bisphosphate —> x2

A

Either Glyceraldehyde 3-P or Dihydroxyacetone - P (DHAP)

20
Q

Glycolysis:

Glyceraldehyde 3-P —-> 1,3 Bisphosphoglycerate

A

Glyceraldehyde 3- Phosphate dehydrogenase, adds a phosphate, catalyses oxidation. NAD+ is reduced to NADH which can then go into ETC if oxygen is present

21
Q

Glycolysis :

1,3 Bisphosphoglycerate —-> 2,3 Bisphosphoglycerate

A

Occurs in the Red blood cells. Enzyme is bisphosphoglycerate mutase.. a mutase can move one functional group from 1 position to another. The net here is 2 ATP/ glucose. RBC have anaerobic glycolysis only, no mitochondria. HBA = decreasing affinity for o2 and unloading in tissues

22
Q

Glycolysis:

1,3 Bisphosphoglycerate—-> 3 Phosphoglycerate

A

3 PK (3 phosphoglycerate kinase) * ATP is produced and example of substrate level phosphorylation (not o2 dependent)

23
Q

Glycolysis:

SUbstrate level phosphorylation enzyme

A

3 phosphoglycerate kinase and pyruvate kinase

24
Q

Glycolysis:

3 phosphoglycerate —-> 2 phosphoglycerate

A

Mutase

25
Q

Glycolysis

2 phosphoglycerate —-> PEP

A

Enolase

26
Q

Glycolysis:

PEP—–> Pyruvate

A

Pyruvate kinase is enzyme. Activated by Fructose 1,6 BP. ATP and substrate level phosphorylation. Irreversible

27
Q

Glycolysis:

DHAP- dihydroxyacetone phosphate

A

Used in hepatic and adipose tissue for triacylglycerol synthesis, formed from F 1,6 BP, Can be isomerized to glycerol 3-P to be converted to glycerol

28
Q

3 Irreverible enzymes of Glycolysis

A

Gluco/hexokinase,
PFK
Pyruvate kinase

29
Q

During glycolysis, if oxygen or mitochondria are absent NADH is oxidized by

A

Lactate dehydrogenase

30
Q

Physiological changes that promote right shift of oxygen dissociation curve

A

Increased 2,3 BPG, low pH, Exercise, High pCO2.

31
Q

Three traits of amino acids

A

Non polar, non aromatic, non polar