Mutations Flashcards

1
Q

Define mutation (2)

A

A heritable alteration in a gene or chromosome (change in nucleotide sequence)

The process that produces alteration (source of alleles - driver of evolution)

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2
Q

What is a transposable element?

A

Specific DNA sequences that don’t have fixed position in the genome - they transpose as a distinct unit to random, discrete sites (reversible)

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3
Q

Transposable elements make up how much of the genome?

A

~50%

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4
Q

What type of micromutations change the open reading frame?

A

Deletions and insertions

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5
Q

What is a transition mutation?

A

When a single nucleotide changes to the same type of base

Purine to purine(A-G)
Pyrimidine to pyrimidine (T-C)

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6
Q

What is a transversion mutation?

A

A single nucleotide change that results in a different base type

Purine to pyrimidine
Pyrimidine to purine
A/G- C/T

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7
Q

What is a missense mutation?

A

A base substitution that changes the amino acid

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8
Q

What is a silent/neutral mutation?

A

A base substitution that results in no amino acid change

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9
Q

What is a non-sense mutation?

A

Early incorporation of a stop codon due to frame shift

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10
Q

What is a protoncogene?

A

Normal version of a gene which encodes protein involved in regulation of cell growth and differentiation

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11
Q

Why are gain of function mutations often dominant?

A

Because they influence the normal function, and a change is seen.

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12
Q

Why are recessive mutations often loss of function?

A

Because the normal 50% of alleles still produce normal protein - so still normal function

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13
Q

Does mitochondrial DNA suffer germline or somatic mutations?

A

Both

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14
Q

What are some of the common symptoms of mitochondrial disease?

A

Muscle weakness, movement problems, diabetes, kidney failure,heart disease, vision abnormalities

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15
Q

What are primordial germ cells?

A

Common origins of spermatozoa and oocytes - ancestor of their germline

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16
Q

When does spermatogenesis begin?

A

At puberty

17
Q

What results from a mutation in early embryogenesis?

A

A mosaic - 2 or more populations of cells in the same individual

18
Q

Generally, recessive mutations are loss of function and effect ________________

A

Biochemical pathways

19
Q

Generally gain of function mutations (dominant) cause _________________

A

Structural abnormalities

20
Q

What is a reciprocal translocation?

A

Two break arrangements

May be balanced (all DNA present) or unbalanced (DNA lost/gained)

21
Q

How are reciprocal transactions assessed for imbalance?

A

Segregation analysis using pachytene diagram

22
Q

What is robertsonian translocation?

A

Two acrocentric chromosomes fused together

23
Q

Carriers of robertsonian translocations have _________ phenotype

A

Normal

24
Q

Robertsonian translocation carriers produce offspring with ……..

A

Either monosomy or trisomy

25
Q

What are the negatives of microarray comparative genomic hybridisation (aCGH)? (4)

A
  • does not detect balanced rearrangements
  • mosaicism may be missed
  • more expensive than katyotyping
  • copy number variation
26
Q

What are the advantages of aCGH?

A
  • entire genome examined at high resolution
  • targeted against known genetic conditions/subtelomere regions
  • one array is equivalent of many 1000s FISH
  • detailed info on genes in deletion/duplication region
27
Q

What conditions is aCGH primarily used for?

A

Visible phenotypes

  • learning difficulties
  • developmental delay
  • multiple congenital abnormalities
28
Q

What is uniparental disomy (UPD)?

A

Presence of homologous chromosomes from one parent

29
Q

What is isodisomy and how is it caused?

A

When an individual has two identical chromosomes from one parent.
Caused by an error meiosis 2

30
Q

What is heterodisomy and how is it caused?

A

When an individual has two homologous chromosomes from one parent
Caused by an error in meiosis 1

31
Q

What’s the most common cause of UPD?

A

Trisomy rescue - non disjunction event in meiosis causes trisomy then a post zygotes mitosis error leads to UPD embryo