5.7 - Respiration Flashcards
(99 cards)
Respiration def
The release of chemical potential energy form organic molecules inside mitochondria
What is ATP?
Adenosine Triphosphate
Uses of ATP and respiration
Used in active transport - sodium/potassium ion pump
Metabolic reactions
Protein synthesis
Endocytosis/pinocytosis/phagocytosis
Exocytosis - secretion of large molecules from cells
DNA Replication
Cell division
Movement
Activation of chemicals
Synthesis of large molecules, e.g. proteins such as collagen, etc
Why ATP is a good energy currency?
- ATP is relatively stable when in solution in cells
- ATP is readily hydrolysed by enzyme catalysis
- Whilst in solution, it can be easily moved from place to place within a cell
Anabolic reaction def
Metabolic reactions where large molecules are synthesised from smaller molecules
Catabolic reaction def
Metabolic reactions involving the hydrolysis of large molecules to smaller molecules
What is phosphorylation?
- When one or more phosphate groups are added to a molecule(e.g. ATP)
- Makes a molecule more unstable, so I easier to hydrolyse
What happens in glycolysis?
simple
- Anaerobic process
- Occurs in cytoplasm of the cell
- 10 reactions occur, each catalysed by a different enzyme, some with the help of the coenzyme, NAD.
- First stage of respiration, converts glucose to pyruvate
4 stages of respiration
What happens in them(simple)?
- Glycolysis - glucose(6C) is broken down to produce 2 molecules of pyruvate(3C)
- The link reaction/oxidative decarboxylation - pyruvate is dehydrogenated and decarboxylated and converted to acetate
- The Krebs Cycle - acetate is dehydrogenated and decarboxylated
- Oxidative phosphorylation - ADP is phosphorylated to AMP
Glycolysis mechanism(simple)
- Phosphorylation of glucose(6C) to hexose biphosphate
- Splitting each hexose biphosphate molecule into two triose phosphate molecules
- Oxidation of triose phosphate to 2 pyruvate molecules
What is NAD?
-NAD(Nicotinamode Adenine Dinucleotide) is an non-protein molecule that helps dehydrogenase enzymes to carry out oxidation reactions
In what stages of respiration does NAD function?
NAD oxidises substrate molecules during:
- Glycolyis
- The link reaction
- The Krebs Cycle
What is FAD?
- Flavine Adenine Dinucleotide
- It is a coenzyme involved in respiration
- More info needed
What are the three main stages of glycolysis?
- Phosphorylation
- Splitting the hexose biphosphate
- Oxidation of triose phosphate to pyruvate
Glycolyis full mechanism
Phosphorylation:
- One molecule of ATP is hydrolysed and the released phosphoryl group is added to glucose to make hexose Monophosphate
- Another molecule of ATP is hydrolysed and the phosphoryl group is added to the hexose phosphate to form a molecule of hexose bisphosphate
- The energy from the hydrolysed ATP molecules activated the hexose sugar and prevents it from being transported out of the cell
Splitting the hexose bisphosphate:
-Each molecule of hexose biphosphate is split into two three-carbon molecules, triose phosphate, each with a phosphate group attached
Oxidation of triose phosphate to pyruvate:
- Dehydrogenase enzymes, aided by coenzyme NAD, remove hydrogens from triose phosphate
- The two molecules of NAD accept the hydrogen atoms(protons and electrons) and become reduced
- At this stage, two molecules of NAD are reduced for every molecule of glucose undergoing glycolysis
- Also at this stage, four molecules of ATP are made for every two triose phosphate molecules undergoing oxidation by substrate level phosphorylation
OVERALL:
2 ATP produced
2NADH produced(reduced NAD)
2 pyruvate produced
Why does glucose undergo phosphorylation in glycolysis?
- Glucose is a hexose sugar, so contains six carbon atoms and is very stable.
- So it needs to be phosphorylated in order to become less stable so it can be broken down by hydrolysis into two three-carbon compounds
What are the products of glycolysis?
From each molecule of glucose, at the end of Glycolyis there are:
- Two molecules of ATP(net gain, as four were made, but two were used ‘kick start’ the process, so net gain is two molecule of ATP)
- Two molecules of reduced NAD
- Two molecules of pyruvate
What can pyruvate be used for after glycolysis?
- actively transported into mitochondria for link reaction (aerobic conditions)
- converted into lactate (anaerobic conditions)
- converted into ethanol (anaerobic conditions)
Hydrolysis of ATP
ATP —> ADP + Pi + H2O —> AMP + Pi + H2O—> Addnosine + Pi
Pi - phosphate group
How much energy does hydrolysis of ATP, ADP and AMP release?
ATP - 30.5kJ mol-1
ADP- 30.5kJ mol-1
AMP-13.8kJ mol-1
Where does aerobic respiration take place in the cells
Mitochondria
Individual structures in mitochondria
- Matrix
- Cristae
- Inner Membrane
- Outer Membrane
- Intermembrane space
- Stalked particles(ATP synthase)
Function of the matrix in mitochondria
The matrix is where the link reaction and Krebs cycle takes place
Matrix contains:
-Enzymes that catalyse stages of link reaction and Krebs cycle
-Molecules of coenzymes NAD and FAD
-Oxaloacetate - four carbon compound that accepts the acetyl group from the link reaction
-Mitochondrial DNA - some of which codes for mitochondrial enzymes and other proteins
-Mitochondrial ribosomes, which are structurally similar to prokaryotic ribosomes.
This is where proteins synthesis occurs
Function of outer membrane in mitochondria
-Contains proteins, some of which form channels or carriers that allow the passage of molecules, such as pyruvate, into the mitochondrion