The Cell Nucleus Flashcards

1
Q

What are the functions of the nucleus?

A
  • store and maintain the cells DNA
  • DNA replication
  • Transcription occurs in the nucleus
  • Ribosomal Biogenesis
  • Controls communication between the nucleoplasm and the cytoplasm
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2
Q

How many pairs of chromosomes does a human cell have?

A

Humans have 23 pairs of chromosomes.

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3
Q

What are the key structural features of a chromosome?

A

Contains telomeres, which protects the ends of chromosomes and maintain stability, and contains a centromere, which is needed during cell division as it holds sister chromatids together during G2 of the cell cycle, as well as making sure that the chromosomes are evenly divided between the two daughter cells. Finally it also contains replication origins (an area which replication is initiated).

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4
Q

How can we identify the different types of chromosomes visually?

A

By looking at the light and dark bands from the g banding, which helps us identify the type of chromosome but this is dependant on the location of the centromere.

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5
Q

What are the arms labelled as?

A

The ‘p’ arm is the top half whereas the bottom half is labelled as the ‘q’ arm.

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6
Q

What does metacentric, submetacentric and acrocentric mean?

A

Metacentric is when the ‘p’ arm length is equal to the length of the ‘q’ arm.
Submetacentric means when the ‘p’ arm is smaller than the ‘q’ arm.
Acrocentric is when the ‘p’ arm is much smaller than the ‘q’ arm.

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7
Q

What is the name of the technique used to visualise human chromosomes?

A

Karyotyping.
This technique is only used to see gross chromosomal abnormalities but cannot detect the small deletions, insertions etc.

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8
Q

What type of karyotyping can be used to visualise small deletions and insertions within chromosomes?

A

Spectral Karyotyping and this modern method uses a fluorescent dye.

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9
Q

How are chromosomes organised within the nucleus during metaphase?

A

They are condensed and tightly packed.

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10
Q

How are chromosomes organised within the nucleus during interphase?

A

They are relaxed and loosely packed.

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11
Q

How can chromosomes be seen during metaphase?

A

They can be seen using light microscopy and also using a technique called ‘FISH’ where a certain number of chromosomes have been tagged yellow.

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12
Q

Where is the location of the nucleus where it is gene-rich?

A

Periphery of the nucleus.

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13
Q

Where is the location of the nucleus where it is gene-poor?

A

Interior of the nucleus.

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14
Q

What is heterochromatin?

A

It is highly condensed chromatin which is found near centromeres and telomeres on chromosomes.
It is gene-poor.
It is highly condensed and is more resistant to gene expression.
It is also associated with the nuclear envelope.
A typical cell will have 10% of its genome made with heterochromatin.

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15
Q

What is euchromatin?

A

It is less condensed chromatin and is gene-rich.
Active genes are usually found within euchromatin.
A typical cell will have majority (90%) of its genome made with euchromatin.

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16
Q

Why does the cell need DNA?

A

For DNA replication, DNA repair as well as to make mRNA and rRNA.

17
Q

What a chromosome territories used for?(nuclear compartments)

A

To store DNA and control access to DNA.

18
Q

What are replication factories used for?(nuclear compartments)

A

Nascent DNA production.

19
Q

What are transcriptional factories used for?(nuclear compartments)

A

Nascent DNA production.

20
Q

What are spliceosomes used for? (nuclear compartments)

A

Are irregular domains which contain splicing factors which are used during transcription.

21
Q

What is the nucleoli used for?(nuclear compartments)

A

Ribosome Biogenesis

22
Q

What are PML nuclear bodies used for? (nuclear compartments)

A

It is used for possible nuclear deport.

23
Q

What are other examples of nuclear compartments?

A

Cajal bodies, Gems, paraspeckles, OPT domains, DNA repair factories, Ikaros, PcG bodies

24
Q

Where what it thought that replication took place?

A

In replication factories.

25
Q

Why is it that replication may not take place in replication factories?

A

Due to recent findings and research.

26
Q

What do DNA replication factories contain?

A

They contain all enzymes and other factors needed to produce two new DNA strands.

27
Q

What do RNA replication factories contain?

A

They contain RNA polymerase II, the template strand and the newly synthesised strand as well as any other factors required.

28
Q

What do the functions of the nucleus include?

A

Transcription of rRNA genes to produce large 45S
rRNA precursor
Cleavage/modification of rRNA into 18S, 5.8S and
28S rRNA
Assembly of ribosomal subunits
 18S – small ribosomal subunit
 5.8S, 28S (and 5S) – large ribosomal subunit

29
Q

What are the steps involved in the transcription of the nucleus?

A

Transcription of rRNA happens in the nucleolus. The rRNA is cleaved and modified by endonucleases (cut in the middle of the DNA strand) and exonucleases (cut at the ends of the DNA strand). Then the 2 ribosomal subunits leave the nucleus and are assembled in the cytoplasm.

30
Q

What are the functions of the different distinct zones found within the nucleus when using electron microscopy?

A

Fibrillar-Center (horse show shaped, where genes being transcribed): contains ribosomal RNA gene which is being transcribed.
Dense-Fibrillar Component: where you get the rRNA transcript.
Granular-Component: processing and assembly.

31
Q

How many rRNA genes are copied per haploid genome?

A

200 which are located in tandem copies on acrocentric chromosomes.

32
Q

Why is it necessary for there to be many copies of ribosomal RNA genes?

A

By having many rRNA genes, it means that it can translate a single mRNA gene many times to give amplification of the final product.
In addition, the cell needs many ribosomes.

33
Q

How does the nucleus communicate to the cytoplasm?

A

It communicates using nuclear pores which, within the nuclear envelope of a typical mammalian cell, can total up to 3000-4000 nuclear pore complexes.

34
Q

What are the key features of a nuclear pore in regards to the movement of molecules?

A

Movement through the nuclear pore is strictly controlled and only small water soluble molecules
can diffuse freely through the pore
Larger molecules must be actively transported through the nuclear pore
NUCLEAR EXPORT: e.g. ribosomal subunits and mRNA - proteins require a nuclear export signal