Tutorial Answers Flashcards
Write a short note on (a) DICOM
(a) DICOM
• DICOM is an international standard for handling, storing, printing and transmitting
information in medical imaging.
• It includes a file format definition and a network communication protocol
• DICOM covers most image formats for all of the medicine
• A single DICOM file contains a header and image data
Write a short note on (b) PACS
(b) PACS
• PACS is an integrated computer system for storage, transfer, and display of
radiological images
• PACS consists of;
o A digital archive to store medical images
o Display workstations to permit physicians to view the images
o A computer network to transfer images and related information between the
imaging devices and the archive, and between the archive and the display
workstation
Magnification results in degradation of spatial resolution. How the magnification and spatial
resolution changes with (a) focal spot size (b) Source to Object Distance (c) Object to Image
Distance
(a) Smaller the focal spot, sharper the image
(b) Increases SOD decreases magnification (better spatial resolution)
(c) Smaller the OID, magnification decreases (better spatial resolution)
Contrast resolution is affected by noises in radiography imaging. Name three types of noises in an
X-ray image?
- Quantum or mottle noise (fluctuation in x-ray, photons, electrons etc),
- Electronic noise (exists in all electronic circuits)
- Anatomical noise (unwanted anatomy)
Briefly explain;
a) Fourier Transform (FT
• Fourier transform decomposes a function of time ( e.g. a signal or an image) into the
sum of a number of sine waves
• FT transforms the spatial domain signal to frequency domain
• FT widely used in medical imaging
• Inverse Fourier Transform, which converts frequency domain to spatial domain is
used in MRI imaging
Briefly explain; (b) The relationship between Signal to Noise Ratio(SNR) and the number of photons (N)
SNR = square root of N
i.e. to double the SNR, the number of photons (hence dose) must be increased by a
factor of 4.
( SNR = Signal/Noise.
Higher SNR means, higher signal and lower noise, therefore a better image
SNR = √𝑁 where N is the number of photons.
Higher exposure → Higher N → Higher SNR →better image → but higher dose )
Briefly explain; Detective Quantum Efficiency (DQE)
• The detective quantum efficiency (DQE) is a measure of the combined effects of the
signal and noise performance of an imaging system
• DQE describes how effectively an x-ray imaging system can produce an image with a
high signal-to-noise ratio (SNR)
• In radiology, DQE is a good measure of the radiation dose efficiency of a detector
(NB: DQE measures the SNR and MTF at various spatial frequencies. High DQE values indicate that less
radiation is needed to achieve a good image quality. The ideal detector would have a DQE of 1, meaning that
all the radiation energy is absorbed and converted into image information)
Briefly explain; Bone densitometry scan (DEXA)
refer lecture notes
Write a short note on Nyquist frequency?
• Nyquist frequency is the highest frequency that can be accurately measured on the
imaging system
• If Δis the centre to centre spacing between each detector elements, the Nyquist frequency
is given by; FN=1/ 2Δ
• If the input frequency incident on the detector is higher than FN, the true frequency will
not be recorded, aliasing effect occurs
• If the input frequency exceeds FN, the measured frequency will be lower than FN by the
same amount by which the input exceeds FN
• e.g. A certain imaging system with FN = 10 is used.
If input frequency = 8 , output frequency = 8 (input freq. less than FN)
input frequency = 9 , output frequency = 9 (input freq. less than FN)
input frequency = 11 , output frequency = 9 (input freq. is FN+1, so output will be FN -1 )
input frequency = 12 , output frequency = 8 (input freq. is FN+2, so output will be FN -2 )and so on…)
For a digital imaging system, the distance between each detector element is 20µm. Estimate
the highest frequency (in cycles/mm), the imaging system can accurately show?
Nyquist frequency; FN=1/ 2Δ
Δ = 20µm = 0.020mm
FN=1/ (2*0.020) = 25 cycles/mm
(a)Why pulse sequences are employed in MR imaging? Name three basic pulse sequences
commonly used in MR imaging?
MRI signal depends on T1 and T2 decay constants and proton density. These parameters are
fundamental properties of tissues. By emphasising the differences between T1 and T2 relaxation
time constants and proton density, the contrast of the MR image can be changed. This is done by
using a pulse sequence, where the nature and timing of the RF signal that generates the transverse
magnetization are changed. Pulse sequences dramatically impact the appearance of the image.
Three basic pulse sequence used in MRI:
i) Spin Echo (900
inversion pulse + 1800
refocusing pulse)
ii) Gradient Echo (generally less than 600
inversion pulse + 1800
refocusing using gradient reversal)
iii) Inversion Recovery (1800
inversion pulse + 900
inversion pulse + 1800
refocusing pulse)
b) The following figure represents a spin echo pulse sequence. Indicate TE and TR?
see diagram
Describe the Spin Echo pulse sequence? Why T2* doesn’t occur in case of SE sequence?
see diagram
Spin Echo pulse sequence consists of a 900 RF pulse to excite the transverse
magnetization (Mxy) followed by a 1800 RF pulse to refocus the spins to generate an
echo signal
– 2 –
First, a 900 RF pulse is applied
o The 900 RF pulse converts Mz into Mxy (i.e. longitudinal to transverse
magnetization)
o Soon after 900 RF pulse, the transverse magnetization decays due to loss of
coherence of protons, mainly due to T2* (extrinsic inhomogeneities)
o This generates an FID signal
Second, a 1800 RF pulse is applied at TE/2
o The 1800 RF pulse applied at TE/2 inverts the spin system hence results in the
cancellation of the extrinsic inhomogeneities and associated dephasing effects.
i.e dephasing effects due to T2*
o As a result, recovery of transverse magnetization occurs, which generates an
echo signal at time TE, in opposite direction to Mxy
(The 1800
pulse will not refocus protons which lose coherence due to T2 relaxation. This is because T2 effect is due
to intrinsic inhomogeneity which is a random process. On the other hand T2* effect is due to external factors, which
is constant over time, will be reversed due to the introduction of 1800
pulse)
Explain in detail T1, PD and T2 weighted image acquisition for Spin Echo pulse sequence? (The
following figure represents a typical T1 and T2 relaxation pattern for different types of tissue.
Use this graph to answer this question. Also, mention the appearance of at least Fat and CSF in
each case)
By changing the pulse sequence parameters TR and TE, the contrast dependence can be weighted
towards T1, proton density or T2 characteristics of the tissue
See diagram
T1 weighting
A T1 weighted SE sequence produces contrast mainly based on the T1 characteristic of
tissue with de-emphasis of T2 and proton density contribution to the signal
Achieved by using a short TR to maximise the difference in longitudinal magnetization
recovery and short T2 to minimise T2 decay
T1 weighted image produces good contrast between soft tissue types (because different
tissues have different T1 values)
Fat with short T1 has a large signal because of the greater recovery of Mz
CSF with long T1 has a low signal
i.e. Fat appear white and CSF appear dark
PD weighting
Proton density contrast weighting relies mainly on differences in the number of
magnetized protons per unit volume of tissue
Achieved by reducing the contribution of T1 recovery and T2 decay
T1 differences are reduced by selecting a long TR
T2 differences of the tissue are reduced by selecting a short TE
Signal strength (contrast) depends on the number of protons
CSF appear bright and Fat appear dark
T2 weighting
T2 weighted image demonstrates the good contrast between normal tissue and pathology
Reduce T1 differences in tissue with long TR
Emphasize T2 difference with long TE
CSF produces a maximum signal (appear white) while fat appear dark [opposite to T1
weighted image]
[NB: Some additional information
T1 effects are connected to TR
T2 effects are connected to TE
Long TR minimises T1 effects, since all tissues have time to fully recover between
excitations
Short TE minimise T2 effects, since there is little time for T2 decay differences to appear]
Gradient Echo technique uses a low initial flip angle (<60 degrees) and a magnetic gradient to
induce an echo signal. What are the advantage and disadvantage of Gradient Echo pulse
sequence?
Advantages:
GE technique has great versatility- A variety of contrasts can be produced while imaging
rapidly
Deposition of RF energy in the patient is lower since the 1800 RF pulses are not used
(less heating of patient tissues)
3D or volume imaging can be accomplished
Disadvantages:
Static inhomogeneity of the magnet and inhomogeneity caused by the magnetic
susceptibility of patient tissue are not corrected by GE (echo in the same direction as
FID). i.e. T2* is not cancelled.
Inversion Recovery pulse sequence uses 1800
-900
-1800
. What is the advantage of using Inversion
Recovery pulse sequence?
Inversion recovery emphasize T1 relaxation time by using an initial 1800
excitation pulse
IR pulse sequence creates a heavily T1 weighted image
IR pulse sequence is useful for the suppression of selected tissues
Disadvantages: Long scan time, also more RF energy deposition within the patient (both
due to the additional pulse)
Explain MRI localization?
Gradient magnetic fields(1-50mT/m) are used for signal localization in MRI
This gradient fields superimposed on the main magnetic filed
i.e. the total magnetic field at any point is the result of the main magnetic field and
gradient magnetic field
As a result, the proton precessional frequencies vary slightly at different points
A selective narrow band of RF pulse excites protons from a specific location where the
RF frequency matches the precessional frequency.
Three gradient coils are used
Slice Selection Gradient (SSG) is applied along the z-axis
Frequency Encode Gradient(FEG) is applied in the x-axis
Phase Encode Gradient (PEG) is applied in the y-axis
Briefly explain k-space image acquisition and image reconstruction in MRI?
MR data are initially stored in the “k space” matrix
“k -space” matrix is a frequency domain repository
The spatial frequency signals acquired during the evolution and decay of echo is stored in
“k space”
– 2 –
Data are deposited in the k space matrix determined by FEG (x-axis gradient) and PEG
(y-axis gradient)
A process known as “inverse two dimensional Fourier Transform” converts data into a
visible image. i.e. convert frequency domain to space domain
The final image is scaled and adjusted to represent the proton density, T1 and T2
characteristic of the tissue using a grayscale range, where each pixel represent a voxel
What are the major safety and biohazard concerns in MRI imaging
Refer lecture notes
Explain why protons act like tiny magnets?
Magnetic fields are created by electric currents, ie, by moving electrically charged particles. A
proton may be thought of as a positively charged spinning sphere. The spinning motion of the
positive electric charge creates the magnetic field of the proton.
Which of the following atoms have a net spin and why? 15P 31 , 6C 12 , 6C 13 , 8O 16 and 2He4 ?
15P
31 and 6C
13. Only atoms with an odd number of protons or neutrons or both have net spin.
Give two reasons, why 1H is best suited for MR imaging?
(a) 1H is very abundant in biological tissues. The body contains mostly fat and water, both of
which contain hydrogen
(b) 1H has a large magnetic moment and therefore provides a strong MRI signal compared to
other nuclei. This is because the nucleus of 1H contains only one proton and no neutron,
therefore there is no neutron present to cancel out (or shield) the proton spin value.
(a) Explain the process of energy level splitting of protons in a strong magnetic field and the
formation of longitudinal magnetization (Mz)?
In a strong external magnetic field (>1 Tesla), protons will either line up its magnetic
moment µ parallel or antiparallel to the external magnetic field
The parallel state has lower energy than the antiparallel state
This splitting in the spin energy level of a nucleus, when placed in an external B field, is
known as the Zeeman effect
Slightly more than half of the protons will be in lower energy state (i.e. aligned with B0)
For a 1 Tesla field, the relative excess is ~3 per million
Hence, a net magnetisation (Mz) is generated in the direction of the external magnetic
field
(b)Why it is better to have a higher strength magnet for MRI imaging (e.g. 3T vs 0.5T )?
The stronger the external magnetic field, the larger the excess nuclei align parallel to the
external magnetic field, hence stronger the net magnetization Mz. This provides a
stronger signal hence better image quality and contrast
What is meant by the precessional motion of protons and Larmor frequency? What is the Larmor
frequency of hydrogen protons in 1 Tesla magnetic field?
When placed in an external magnetic field, other than spinning its own axis, protons also undergo
a precessional motion around the external magnetic field. The frequency of this precessional
motional is known as Larmour frequency.
Larmor frequency; f = Gyromagnetic ratio x External magnetic field
Gyromagnetic ratio is unique to each element
The Larmor frequency of hydrogen proton in 1Tesla field is 42.6MHz
(i.e. to flip the protons in a 1T field, we use a radio frequency pulse of frequency 42.6MHz,
in 2 T field RF pulse of frequency, 2 x 42.6 = 85.2MHz and so on)
Explain the T2 relaxation (spin-spin)process and FID with the help of a simple diagram? What is
T2* relaxation?
T2 Relaxation
(for the detailed figure, refer to lecture slides)
With the 900 RF pulse, a maximum net magnetization Mxy is generated in the transverse
direction
The transverse magnetic field Mxy induces a signal in the receiver coil due to Faraday’s
induction
This damped sinusoidal signal is known as Free Induction Decay (FID)
After the RF signal applied, Mxy decays due to loss of coherence
Loss of phase coherence is due to intrinsic micromagnetic inhomogeneities in the sample
Due to the loss of phase coherence, the transverse magnetization Mxy decays
T2 relaxation time is defined as the time for the transverse magnetization to reduce to
37% of its initial value
T2* relaxation:
Extrinsic magnetic inhomogeneities (imperfect main magnetic field, the presence
of magnetic materials etc) also causes loss of phase coherence
This process is known as T2* decay.
T2* decay time is much shorter than T2 decay
T2* decay doesn’t provide useful information about tissues in most cases (except
in some cases)
Moreover, it will mask the signal due to T2 decay
refer figure
T2 relaxation depends on molecular size and motion. Explain
T2 relaxation is due to the loss of phase coherence as a result of intrinsic micro magnetic
inhomogeneities, whereby individual protons precess at different frequencies arising
from the slight changes in local magnetic field strengths
T2 values depend on the molecular structure of the sample
Amorphous structures (CSF, edemous tissue, water) contain mobile molecules with fast
and rapid motion. These tissues do not support intrinsic magnetic field inhomogeneities,
hence exhibit long T2
Large macromolecules (bone) are non-moving and have a large intrinsic field, hence very
short T2
T2 relaxation time doesn’t depend on field strength (very small dependence)
Describe T1 relaxation (spin-lattice) with the help of a simple diagram?
Longitudinal magnetization Mz begins to recover simultaneously with transverse (Mxy)
decay
T1 relaxation is due to the energy dissipation of protons into the surrounding lattice
T1 relaxation time is defined as the time needed for the recovery of 63% of Mz after 900
pulse
T1 is also known as spin-lattice relaxation time
T1 value is affected by the external magnetic field: higher B0 longer T1
refer figure
Why T1 relaxation is different for different tissues? (use the following graph to answer this
question) refer figure
T1 relaxation time depends on the rate of energy dissipation into the surrounding
molecular lattice
Molecules are tumbling through space with certain frequencies
Energy transfer is most efficient when these tumbling frequencies(vibrational
frequencies) are comparable to Larmour frequency
Small molecule (water, CSF) have a broad distribution of motional frequencies with poor
matching with Larmour frequencies, hence shows long T1 values
Medium-sized molecules (proteins, fatty tissues) have a narrow distribution of tumbling
frequencies and good matching with Larmour frequencies. Hence,short T1 values
Large-sized molecules tumble too slowly and almost no matching with Larmour
frequency, hence very long T1
What are the main advantages and disadvantages of Brachytherapy, compared to external
beam therapy?
Advantages of brachytherapy Improved localisation of dose Better sparing of overlying tissues Sharp dose fall-off outside the target volume Disadvantages of brachytherapy Only for well localised tumours Only for relatively small tumours (depending) Very labour intensive
Briefly explain the classification in brachytherapy based on (a) treatment duration and (b)
dose rate.
(a) Based on treatment duration, Brachytherapy is classified into temporary & permanent
Temporary implant
The dose is delivered over a relatively short time compared to the half-life of the
source
Sources are removed once the prescribed dose has been delivered
Permanent Implant
Sources are implanted and remain there until the patient dies
Dose is delivered over the full lifetime of the sources (i.e they are usually non
radioactive when the patient dies)
(b) Based on dose rate, Brachytherapy is classified into LDR, MDR & HDR
Low Dose Rate, LDR - (0.4 – 2 Gy/h)
Medium Dose Rate, MDR- (2 – 12 Gy/h)
High Dose Rate, HDR- (>12 Gy/h) – treatment time is significantly reduced and
often minutes. Much superior in terms of patient comfort
Briefly explain hot loading, manual after loading and remote after loading
Hot loading
The applicator/catheter comes with the radioactive sources already inside
This is then implanted into the patient at the desired site
Common for LDR treatments of the prostate
Manual afterloading
One or many applicator/catheter is first placed into the patient at the treatment site,
sources are loaded later
This can be done by hand (manual afterloading) – not generally done anymore due to
radioprotection issues
Remote afterloading
Applicators/catheter is first placed into the patient at the treatment site
Sources are loaded later using a machine (aka remote afterloading)
Due to safety concerns, this is the preferred option as the source can be controlled
from a shielded room away from the patient
Write a short description of a remote afterloading HDR unit and explain how the desired dose
distribution is achieved within the patient
Nucletron micro Selectron-HDR Unit (one of the most common HDR unit)
Single Ir-192 source (10Ci or 370 GBq, few mm long) contained in tungsten shielded
safe in the head of the machine.
Source capsule is laser welded to a long drive cable, which is connected to a
computer-controlled stepper motor.
This can position the source to sub-mm accuracy along a transfer tube and catheter
combination
The Ir-192 source moves step by step through the catheter, controlled by the
computerised motor
The dwell times at each location determine the dose distribution within the patient
What decay type would you prefer for the following applications; (a) Intracavitary(b)
intravascular and why?
(a) The treatment volume is several cms in size, hence gamma radiation (most commonly
done using Ir-192 HDR) is preferred
(b) Need to deliver a uniform dose to the arterial wall (few mm ), hence beta source is
preferred. (Sr/Y-90, P-32 etc)
(note: For most cases in Brachytherapy, the treatment volume is several centimetres in size, hence
a gamma source is needed to penetrate the whole target. A beta source is only used for
intravascular and ophthalmic applications because the treatment volume is few mm, hence less
penetrating radiation preferred.)
Write a short note on various types (at least five) of Brachytherapy applications? (Include
common sites and at least one isotope used in each case)
Intracavitary:
Used for gynaecological cancers (most common), rectum etc.
Use specialised applicators such as the Fletcher-Suit applicator, which consists of a
long tube (tandem) which extends up into the uterus and lateral ‘ovoids’ which allow
the dose to the cervix to be boosted while protecting the surface of the vagina from
high doses
Generally, Ir-192 HDR technique is used
Interstitial
Used for Prostate(most common), Breast & Head and Neck
Sources are directly implanted into the tumour volume
This might be via an applicator/catheter or by directly placing the source in the tissue
For low-grade prostate I-125 permanent implant is used
For high-grade prostate cancer, Ir-192 HDR is used
Intraluminal:
Various lumen in the body can also be treated with brachytherapy including
Oesophagus, Bile duct, Lung
A long catheter is inserted via the respective orifice to the treatment site
The source is then driven to the required positions to achieve the desired dose
distribution
Usually done in an HDR setting using Ir-192
Eye plaque:
used to treat ocular melanomas and retinoblastomas
Ru-106 is commonly used. Ru-106 decays via beta with rapid dose fall-off, hence
providing good tumour control and preserving a degree of visual acuity
I-125 seeds are also used
Intravascular:
Primarily used to combat restenosis of the coronary arteries
A high energy beta source is preferred (or intermediate energy gamma source)
Commonly used isotopes; Sr/Y90 source pellet, radioactive stents impregnated with
P-32
List three factors that influence the choice of radiation detector for a given application.
Radiation type Energy Desired quantity to be measured Dose-rate or exposure-rate of radiation Useful range of the detector Precision
(a) . Briefly describe (i) gas-filled detectors,(ii) semiconductors (iii) luminescence detectors
(iv) film detectors
Gas-filled detectors: A volume of (usually inert) gas is housed between two electrodes.
Ionisation radiation generates charged particles within the gas. These are accelerated toward
the electrodes and produce an electric current, which is then measured (e.g. by an
electrometer).
Semiconductor detectors: A reverse bias is applied to a p-n junction (diode), producing a
depletion region between the n¬-type and ¬p¬-type regions of the crystal. The n¬-type and
¬p¬-type regions now serve as electrodes on either side of a region containing no free
electrons/holes. Ionisation radiation produces free electrons/holes in the depletion region
which travel toward the electrodes, producing an electric current in a similar fashion to gasfilled detectors. This current is then measured using an electrometer.
Luminescence detectors: Luminescence detectors are crystals that emit light when exposed
to ionising radiation. This light is then converted to electric current using a PMT or similar.
The current is then measured using an electrometer.
Film detectors: 2D detectors that change colour (darken) when exposed to ionising radiation.
Optical transmission through the film is a measure of the dose.
(b).List one example of detector type for each of the four categories.
Gas-filled: Any one of the following: •Ionisation chamber •Proportional counter •Geiger-Müller counter Semiconductor: Any one of the following: •Silicon diode •Germanium detector •MOSFET Luminescence: Any one of the following: •Inorganic scintillator •Organic scintillator •Thermoluminescence detector •Optically stimulated luminescence detector Film: Any one of the following: •Radiographic film •Radiochromic film
(a).What are the three types of gas-filled detectors? What is the major difference between
them?
Ionisation chambers, proportional counters, and Geiger-Müller counters.
The major difference is the voltage applied between the electrodes.