Viral infection Flashcards

1
Q

Influenza: Overview

A

Acute viral infection of lungs and airways.

The influenza virus is an RNA virus. There are three types: A, B and C, of which A and B are the most common. The A type has different H and N subtypes and you may hear about different strains, for example H1N1 (swine flu) and H5N1 (avian flu). Outbreaks typically occur during the winter.

  • Common throughout the world.
  • Affects 5-10% of adults.
  • Affects 20-30% of children.
  • In most, it is a self-limiting illness.
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2
Q

Seasonal influenza: Effect of complications

A

Complications can be life threatening in:

  • Elderly
  • Pregnant women
  • Those with chronic disease
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3
Q

Influenza: Vaccination

A

Every year the vaccine is changed to target multiple strains of influenza that are likely to cause flu. It needs to be given yearly to keep the person protected.

It is given free on the NHS people at higher risk of developing flu:

  • Aged 65
  • Young children
  • Pregnant women
  • Chronic health conditions such as asthma, COPD, heart failure and diabetes
  • Healthcare workers and carers
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4
Q

Influenza: Presentation

A
  • Fever
  • Coryzal symptoms
  • Lethargy and fatigue
  • Anorexia (loss of appetite)
  • Muscle and joint aches
  • Headache
  • Dry cough
  • Sore throat
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5
Q

Influenza: Diagnosis

A

Treatment is usually started based on the history, risk factors and clinical presentation.

Viral nasal or throat swabs can be sent to the local virology lab for polymerase chain reaction (PCR) analysis.

This will confirm the diagnosis and also provide data to public health so that they can monitor the number of cases of influenza.

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6
Q

Influenza: Management

A

Public health monitor the number of cases of flu and provide guidance on when there is enough flu in the area to justify treating patients with suspected flu.

Healthy patients that are not at risk of complications do not need treatment with antiviral medications. The infection will resolve with self care measures such as adequate fluid intake and rest.

There are two options for treatment in someone presenting with suspected influenza that is at risk of complications of influenza:

  • Oral oseltamivir 75mg twice daily for 5 days
  • Inhaled zanamivir 10mg twice daily for 5 days

Treatment needs to be started within 48 hours of the onset of symptoms to be ef

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7
Q

Influenza: Post-exposure prophylaxis

A

Post-exposure prophylaxis can be given to higher risk patients such as those with chronic diseases or immunosuppression within 48 hours of close contact with influenza. This aims to minimise the risk of developing flu and complications.

  • Oral oseltamivir 75mg once daily for 10 days
  • Inhaled zanamivir 10mg once daily for 10 days
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8
Q

Influenza: Complications

A
  • Otitis media, sinusitis and bronchitis
  • Viral pneumonia
  • Secondary bacteria pneumonia
  • Worsening of chronic health conditions such as COPD and heart failure
  • Febrile convulsions (young children)
  • Encephalitis
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9
Q

HIV: Definitions

A
  • HIV – Human Immunodeficiency Virus
  • AIDS – Acquired Immunodeficiency Syndrome
  • AIDS is usually referred to in the UK as Late Stage HIV
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10
Q

HIV: Basics

A

HIV is an RNA retrovirus. HIV-1 is most common type. HIV-2 is rare outside West Africa.

The virus enters and destroys the CD4 T helper cells. An initial seroconversion flu like illness occurs within a few weeks of infection. T

he infection is then asymptomatic until it progresses and the patient becomes immunocompromised and develops AIDS defining illnesses and opportunistic infections potentially years later.

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11
Q

HIV: Transmission

A

HIV can’t spread through normal day to day activities including kissing. It is spread through:

  • Unprotected anal, vaginal or oral sexual activity.
  • Mother to child at any stage of pregnancy, birth or breastfeeding. This is referred to as vertical transmission.
  • Mucous membrane, blood or open wound exposure to infected blood or bodily fluids such as through sharing needles, needle-stick injuries or blood splashed in an eye.
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12
Q

HIV: AIDS defining illness

A

There is a long list of AIDS defining illnesses associated with end stage HIV infection where the CD4 count has dropped to a level that allows for unusual opportunistic infections and malignancies to appear.

Some examples are:

  • Kaposi’s sarcoma
  • Pneumocystis jirovecii pneumonia (PCP)
  • Cytomegalovirus infection
  • Candidiasis (oesophageal or bronchial)
  • Lymphomas
  • Tuberculosis
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13
Q

HIV: Screening

A

HIV is a treatable condition and most patients are fit and healthy on treatment. There are many people that have HIV that do not know the diagnosis and these patients are at risk of the complications and spreading the disease. Generally the earlier a patient is diagnosed the better the outcome.

We should test practically everyone admitted to hospital with an infectious disease regardless of their risk factors. Patients with any risk factors should be tested. Antibody tests can be negative for 3 months following exposure so repeat testing is necessary if an initial test is negative within 3 months of a potential exposure.

Patients need to give consent for a test. Verbal consent should be documented prior to a test. Consent only needs to be as simple as “are you happy for us to test you for HIV?” Patients no longer require formal counselling or education prior to a test.

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14
Q

HIV: Prevention (4)

A
  • Sexual transmission: condom use
  • Post-exposure prophylaxis (PEP)
  • Pre-exposure prophylaxis (PrEP)
  • Vertical transmission
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15
Q

HIV: Testing (4)

A
  • Viral load
    PCR testing for the HIV RNA levels tests directly for the quantity of the HIV virus in the blood and gives a viral load.
  • HIV antibody test
    Most common and accurate test. Usually consists of both a screening ELISA (Enzyme Linked Immuno-Sorbent Assay) test and a confirmatory Western Blot Assay. Most people develop antibodies to HIV at 4-6 weeks but 99% do by 3 months. There is an option for patients to self sample by requesting a kit online and posting a sample of their blood to get tested for the antibody.
  • p24 antigen test
    PCR test. Usually positive from about 1 week to 3 - 4 weeks after infection with HIV (can be positive before antibody test). Sometimes used as an additional screening test in blood banks
  • CD4 count
    Cannot diagnose HIV. Use to monitor immune system function and disease progression in patients with HIV.
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16
Q

HIV: Monitoring (2)

A
  • CD4 count

- Viral load

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17
Q

HIV: Monitoring - CD4 count

A

This is a count of the number of CD4 cells in the blood. These are the cells destroyed by the HIV virus. The lower the count the higher the risk of opportunistic infection.

  • 500-1200 cells/mm3 is the normal range
  • Under 200 cells/mm3 is considered end stage HIV / AIDS and puts the patient at high risk of opportunistic infections
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18
Q

HIV: Monitoring - Viral load (VL)

A

Viral load is the number of copies of HIV RNA per ml of blood.

“Undetectable” refers to a viral load below the labs recordable range (usually 50 – 100 copies/ml).

The viral load can be in the hundreds of thousands in untreated HIV.

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19
Q

HIV: Presentation

A
  1. With symptoms of early HIV infection:
    - Primary HIV infection (seroconversion)
    - Persistent generalised lymphadenopathy
  2. In the asymptomatic, latent phase of chronic HIV infection
  3. With complication of immune dysfunction
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20
Q

HIV: Needle-stick injury

A

Risk of HIV transmission from a single needle-stick exposure from a person with HIV not on ART is about 1 in 300 (lower than the risks of hepatitis B and C transmission).

Prevent:

  • Use ‘safer sharps’ (incorporates mechanism to minimize accidental injury)
  • Do not recap unprotected medical sharps
  • When using sharps, ensure there is a disposal container nearby

Manage:
- Encourage the wound to bleed
- Ideally under running water - do not suck
- Wash with soap and running water
- Do not scrub
- Seek advice from occupational health/infection control
regarding source testing + PEP

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21
Q

HIV: seroconversion

A

HIV seroconversion is symptomatic in 60-80% of patients and typically presents as a glandular fever type illness. Increased symptomatic severity is associated with poorer long term prognosis. It typically occurs 3-12 weeks after infection

Features

  • sore throat
  • lymphadenopathy
  • malaise, myalgia, arthralgia
  • diarrhoea
  • maculopapular rash
  • mouth ulcers
  • rarely meningoencephalitis
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22
Q

HIV: Classification of complications (3)

A
  • Complications of immune dysfunction
  • Complicating comorbidity
  • Complications of treatment
23
Q

HIV: Opportunistic infections

A
  • Pneumocystis jirovecii
  • Candidiasis
  • Cryptococus neoformans
  • Toxoplasma gondii
  • Cytomegalovirus (CMV)
  • Cryptosporidium
  • Kaposi’s sarcoma
  • Lymphoma
24
Q

HIV: Complicating comorbidity (5)

A
  • Cardiovascular disease (increased in HIV)
  • Bone disease
  • TB
  • Hepatitis B (HBV)
  • Hepatitis C (HCV)
25
Q

HIV: Treatment - Overview

A
  • Coordinated by specialist HIV or GUM centres.
  • Involves a combination of antiretroviral therapy (ART) medications.
  • ART is offered to everyone with a diagnosis of HIV irrespective of viral load or CD4 count.
  • Some regimes involve only a single combination tablet once per day that has the potential to completely suppress the infection.
  • Specialist blood tests can establish the resistance of each HIV strain to different medications to help tailor treatment.
  • BHIVA guidelines (2015) recommend a starting regime of 2 NRTIs (e.g. tenofovir and emtricitabine) plus a third agent.
26
Q

HIV: Starting treatment

A
  1. Counselling
  2. Screen for infections and malignancy
  3. Baseline tests
  4. Review usual medications for possible drug reactions
27
Q

HIV: Treatment - Aims

A

The aim of treatment is to achieve a normal CD4 count and undetectable viral load.

As a general rule when a patient has normal CD4 and undetectable VL on ART: treat their physical health problems (e.g. routine chest infections) as you would an HIV -ve patient.

When prescribing be aware and check interactions any medication might have with the HIV therapy.

28
Q

HIV: Highly Active Anti-Retrovirus Therapy (HAART) Medication Classes

A
  • Protease Inhibitors (PIs)
  • Integrase Inhibitors (IIs)
  • Nucleoside Reverse Transcriptase Inhibitors (NRTIs)
  • Non-Nucleoside Reverse Transcriptase Inhibitors (NNRTIs)
  • Entry Inhibitors (EIs)
29
Q

HIV: Treatment - Adherence

A

Decreased adherence to ATR is associated with drug resistance, disease progression, and death. Adherence support should be integral to ART provision.

ASSESS: ask about non-adherence is a non-judgemental way. Do not blame. Explain the reasoning behind your questions. Is non-adherence due to practical problems or healthcare beliefs? Be ready to address both?

INTERVENE: Normalise the situation - doubts and concerns with HRT are common. Find time for discussion/information. Address concerns. Simplify the dosage regimen.

30
Q

HIV: Reproductive health

A
  • Advise condoms: for vaginal and anal sex and dams for oral sex even with when both partners are positive.
  • Undetectable = Untransmissable
  • U=U campaign
  • Where the affected partner has an undetectable viral load unprotected sex and pregnancy may be considered. – It is also possible to conceive safely through techniques like sperm washing and IVF.
  • C-section should be used.
  • Unless the mother has an undetectable viral load.
  • Vaginal birth may be considered where the viral load is undetectable.
  • Newborns to HIV positive mothers should receive ART for 4 weeks after birth to reduce the risk of vertical transmission.
  • Breastfeeding is only considered where the viral load is undetectable however there may still be a risk of contracting HIV through breastfeeding.
31
Q

HIV: Post Exposure Prophylaxis

A

Post exposure prophylaxis can be used after exposure to HIV to reduce the risk of transmission. It is not 100% effective and must be commenced within a short period (less than 72 hours). The sooner it is started the better. A risk assessment about the probability of developing HIV should be balanced against the side effects of post exposure prophylaxis.

It involves a combination of ART therapy. The current regime is Truvada (emtricitabine / tenofovir) and raltegravir for 28 days.

HIV tests should be done initially but also a minimum of 3 months after exposure to confirm a negative status. Individuals should abstain from unprotected activity for a minimum of 3 months until confirmed negative.

32
Q

Herpes viruses

A
  • Herpes simplex virus (HSV) (1+2)
  • Varicella zoster virus (VSV) (3) (shingles + chicken pox)
  • Epstein-Barr virus (EBV) (4)
  • Cytlomegalovirus (CMV) (5)
  • Human herpesvirus 6 (HHV6)
  • Human herpesvirus 8 (HHV8)
33
Q

Herpes simplex: Overview

A

Herpes simplex virus (HSV) causes both coldsores and genital herpes. There are two main strains, HSV-1 and HSV-2. Generally HSV-1 causes coldsores and HSV-2 causes genital herpes, however there is some overlap.

Both can also cause aphthous ulcers (small painful oral ulcers) that are sometimes called stomatitis herpetiformis.

34
Q

Herpes simplex: Presentation of genital herpes

A
  • Labial ulceration / vesicular lesions
  • Pain
  • No discharge
  • Ask about sexual contacts (including those with coldsores)
35
Q

Herpes simplex: Diagnosis

A
  • Diagnosis can be made clinically

- A swab can be taken for a viral PCR to identify the cause

36
Q

Herpes simplex: Management

A

Treatment of any herpes simplex virus is with aciclovir (oral in stomatitis and genital herpes and topical with cold sores). Treatment can be slow and require long term aciclovir.

37
Q

Herpes simplex: Pregnancy + genital herpes

A

Aciclovir can be used to treat genital herpes in pregnancy.

Neonatal herpes simplex infection has high morbidity and mortality. It should be avoided as much as possible and treated early if identified.

The risk of transmission during birth should be minimised:

  • If the lesions first appear after 28 weeks gestation then elective caesarean at term is advised (it takes 6 weeks for the fetus to develop passive immunity).
  • If recurrent genital herpes is a known problem, then aciclovir can be started and it is thought that the risk of transmission in vaginal delivery is low.

N.B genital herpes does not increase the risk of miscarriage.

38
Q

Herpes simplex: Anatomy of infection

A
  • Herpes labialis: cold sore lesions @ lip border
  • Genital herpes: predominantly HSV2
  • Gingivostomatitis: fever, sore throat
  • Keratoconjunctivitis: corneal dendritic ulcers
  • Herpes whitlow: painful vesicles on distal phalanx due to innoculation through a break in the skin
  • Herpatic encephalitis: most common treatable viral encephalitis
  • Secondary infection: HSV infection of erythematous skin
39
Q

Varicella zoster virus: Overview

A
  • Primary infection transmitted by respiratory droplets.
  • Leads to virus containing vesicles = chicken pox.
  • Virus then remains dormant in sensory nerve routes.
  • Reactivation is dermatomal = shingles.
40
Q

Varicella zoster virus: Presentation

A

Chicken pox: fever, malaise, headache, abdominal pain. Then rash pruritic, erythematous macules to vesicles, crust in about 48 hrs

Shingles: painful, hyperaesthetic area, then macular to vesicular rash in dermatomal distribution

41
Q

Varicella zoster virus: Diagnosis

A

Clinical diagnosis, unless immunosuppressed

42
Q

Epstein-Barr Virus: Overview

A

The Epstein–Barr virus, formally called Human gammaherpesvirus 4, is one of the nine known human herpesvirus types in the herpes family, and is one of the most common viruses in humans. It is best known as the cause of infectious mononucleosis

Malignancies associated with EBV infection

  • Burkitt’s lymphoma
  • Hodgkin’s lymphoma
  • nasopharyngeal carcinoma
  • HIV-associated central nervous system lymphomas

The non-malignant condition hairy leukoplakia is also associated with EBV infection.

43
Q

Cytomegalovirus (CMV)

A

Cytomegalovirus (CMV) is a ubiquitous beta-herpes virus that infects the majority of humans. Primary infection in individuals with normal immune function is usually asymptomatic.

After primary infection, CMV establishes a state of lifelong latency in various host cells, with periodic sub-clinical re-activations that are controlled by a functioning immune system.

When re-activation (or primary infection) occurs in patients with severely compromised immune function (transplant patients or patients with AIDS and CD4 count <50 cells/microlitre), uncontrolled CMV replication often ensues, which leads to the clinical manifestations characterised by fever, bone marrow suppression, and tissue-invasive disease.

44
Q

Other viruses

A
  • Respiratory tract viruses
  • Human papilloma virus (HPV)
  • Polyomavirus
  • Measles
  • Mumps
  • Rubella (German Measles)
45
Q

Oncogenic viruses: Overview

A

Around 12% of human cancers are caused by viruses, >80% of these occur in low- and middle-income countries.

Common traits of oncoviruses:

  • Virus is necessary, but not sufficient to cause cancer
  • Cancers appear in the context of chronic infection, taking years/decades to appear
  • Immune system has a variable role: cancers are associated with both immunosuppression and chronic inflammation.
46
Q

Oncogenic viruses: Examples

A
  • Cytomegalovirus (CMV)
  • Human herpesvirus 8 (HHV8)
  • HPV
  • Hepatitis B and C
  • Human T-lymphotrophic virus
  • Merkel Cell Polyomavirus (MCV)
47
Q

Respiratory tract viruses:

  • Transmission
  • Examples
A

Transmission: direct contact, airborne droplets

Examples:

  • Rhinovirus
  • Coronivirus
  • Adenovirus
  • Respiratory synctial virus (RSV)
48
Q

Human Papilloma Virus (HPV): Overview

A

> 120 HPVs. Pathology.

  • Skin warts, veruccas (HPV 1, 2)
  • Anogenital warts (HPV 6, 11)
  • Cervical cancer (HPV 16, 18)
49
Q

Polyomavirus: Overview

A

Polyomaviruses are small, nonenveloped DNA viruses, which are widespread in nature. In immunocompetent hosts, the viruses remain latent after primary infection.

Disease only occurs with immunosuppresion: BK virus causes renal transplant nephropathy; JC virus causes progressive multifocus leucoencephalopathy.

50
Q

Measles: Overview

A

Measles is now rarely seen in the developed world following the adoption of immunisation programmes. Outbreaks are occasionally seen, particularly when vaccinations rates drop, for example after the MMR controversy of the early 2000’s.

Overview

  • RNA paramyxovirus
  • spread by droplets
  • infective from prodrome until 4 days after rash starts
  • incubation period = 10-14 days

Features

  • prodrome: irritable, conjunctivitis, fever
  • Koplik spots (before rash): white spots (‘grain of salt’) on buccal mucosa
  • rash: starts behind ears then to whole body, discrete maculopapular rash becoming blotchy & confluent

N.B. Measles is highly contagious: >95% of the population need coverage for ‘herd immunity’.

51
Q

Mumps: Overview

A

Mumps is a caused by RNA paramyxovirus and tends to occur in winter and spring

Spread

  • by droplets
  • respiratory tract epithelial cells → parotid glands → other tissues
  • infective 7 days before and 9 days after parotid swelling starts
  • incubation period = 14-21 days

Clinical features

  • fever
  • malaise, muscular pain
  • parotitis (‘earache’, ‘pain on eating’): unilateral initially then becomes bilateral in 70%

Prevention
- MMR vaccine: the efficacy is around 80%

Management

  • rest
  • paracetamol for high fever/discomfort
  • notifiable disease

Complications

  • orchitis - uncommon in pre-pubertal males but occurs in around 25-35% of post-pubertal males.
  • Typically occurs four or five days after the start of parotitis
  • hearing loss - usually unilateral and transient
  • meningoencephalitis
  • pancreatitis
52
Q

Rubella: Overview

A

Rubella, also known as German measles, is a viral infection caused by the togavirus. Following the introduction of the MMR vaccine, it is now very rare (typically less than 5 cases in the UK per year). If contracted during pregnancy there is a risk of congenital rubella syndrome

Basics

  • outbreaks more common around winter and spring
  • the incubation period is 14-21 days
  • individuals are infectious from 7 days before symptoms appear to 4 days after the onset of the rash

Features

  • prodrome, e.g. low-grade fever
  • rash: maculopapular, initially on the face before spreading to the whole body, usually fades by the 3-5 day
  • lymphadenopathy: suboccipital and postauricular

Complications

  • arthritis
  • thrombocytopaenia
  • encephalitis
  • myocarditis
53
Q

Rubella + pregnancy

A

If contracted during pregnancy there is a risk of congenital rubella syndrome.

Risk

  • in first 8-10 weeks risk of damage to fetus is as high as 90%
  • damage is rare after 16 weeks

Features of congenital rubella syndrome

  • sensorineural deafness
  • congenital cataracts
  • congenital heart disease (e.g. patent ductus arteriosus)
  • growth retardation
  • hepatosplenomegaly
  • purpuric skin lesions
  • ‘salt and pepper’ chorioretinitis
  • microphthalmia
  • cerebral palsy