Lectures 4-7 Flashcards

1
Q

3 possible ways to grow/cultivate viruses

A

cell/tissue culture, inoculation in embryonated egg, lab animals

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2
Q

advantages of using primary cell culture

A

best culture system for isolation and propagation of viruses, heterogeneous cells, closest to live animal, used in producing viral vaccines

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3
Q

disadvantages of primary cell culture

A

difficult to obtain, short lifespan, susceptible to contamination, may not entirely act like parent tissue

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4
Q

characteristics of finite cell lines

A

limited life span, more homogeneous cells, mainly derived from embryos or from secondary cell cultures, slow growth rate, can be used for vaccine production

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5
Q

Characteristics of continuous cell lines

A

the most homogeneous (1 cell type), derived from cancer cells, least similar to live animal, rapid growth rate, prohibited to use for vaccine production

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6
Q

Cell culture medium

A

provides all necessary nutrients required for cell growth

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7
Q

serum in culture

A

vital source of adhesion factors, attachment and spreading factors, nutrients, hormones and growth factors. required for growth and maintenance of cells. fetal bovine serum most common

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8
Q

Phenol red

A

pH indicator to ensure culture is at proper temperature. turns orange/yellow if acidic pH, remains red at pH of 7. pH drops due to contamination or buildup of toxic metabolites

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9
Q

CO2 levels in culture

A

Changes in environmental pH may alter culture pH –> use exogenous CO2 when using a CO2-bicarbonate based buffer medium (CO2 incubator)

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10
Q

trypsin

A

protease used to detach cells to form subculture

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11
Q

Cytopathic effect (CPE)

A

damage/changes to host cells due to virus cell invasion

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12
Q

Routes of egg inoculation

A

Yolk sac, allantoic cavity, amniotic cavity, chorioallantoic membrane

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13
Q

Signs of virus growth (in egg inoculation)

A

death of embryo, paralysis, stunted growth, pocks on CAM

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14
Q

Virus titer

A

lowest concentration of a virus that can still infect cells.

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15
Q

Biological quantification tests

A

dependent on the virus completing a replication cycle. Includes: plaque assay, pock assay, endpoint titration

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16
Q

Physical quantification tests

A

do not depend on the virus’ biological activity. Includes: EM particle counts, hemagglutination, immunological assays, qPCR, flow cytometry

17
Q

reasons why EM particle counting is not routine

A

expensive, requires trained staff, cannot assess biological activity of the preparation, high chance of error

18
Q

Single radial immunodiffusion

A

diffusion of purified viral antigens and viral particles through agarose gel seeded with polyclonal antisera against viral antigen

19
Q

What is the measurement plaque-forming unit?

A

measures the number of particles capable of forming plaques per unit volume.

20
Q

how to determine titer from PFU

A

average plaque count x reciprocal of the dilution

Unit = PFU/mL

21
Q

Pock assay

A

unit = pock-forming units/mL. done via inoculation of virus in CAM

22
Q

Transformation assay

A

quantitative determination of titers of oncogenic viruses

Unit: focus-forming unit/mL

23
Q

Quantal assay

A

measures the presence or absence of infection. Used for certain viruses that dont form plaques or for determining virulence.
Endpoint - virus dilution that affects 50% of test subjects

24
Q

TCID50

A

tissue culture infectious dose which will infect 50% of cell monolayers

25
Q

Latent period

A

the period after uncoating until just before the 1st appearance of new extracellular virus particles

26
Q

Eclipse period

A

the period after uncoating until just before the 1st appearance of new intracellular virus particles

27
Q

Burst size

A

number of infectious virions released per average cell

28
Q

methods of virus penetration for nonenveloped viruses

A

receptor mediated endocytosis, pore mediated penetration

29
Q

method of virus penetration for enveloped viruses

A

surface membrane fusion, receptor mediated endocytosis (with pH dependent fusion protein)

30
Q

antibody mediated attachment and penetration

A

ex: FIPV

antibodies against the virus and facilitate entry of trhe virus into a host cell through the FCgamma receptor

31
Q

2 main byproducts of virus replication

A
  1. copies of viral DNA/RNA for progeny

2. viral proteins for capsid and other replication proteins

32
Q

processing of viral mRNA

A
  1. 5’ cap
  2. Poly A tail
  3. splicing
33
Q

Monocistronic

A

mRNA that encodes one polypeptide

34
Q

Polycistronic

A

mRNA that encodes several polypeptides

35
Q

How do enveloped vs non-enveloped viruses exit the cell

A

enveloped: budding, exocytosis

non-enveloped: lysis of host cell

36
Q

3 methods of cell-cell virus spread

A
  1. Intercellular
  2. Extracellular
  3. Nuclear