A2.1: Origin of Cells Flashcards

1
Q

Outline the conditions that are thought to have existed on prebiotic Earth, including atmosphere, temperature, UV radiation, volcanic activity and asteroid bombardment.

A
  • Reducing Atmosphere; CO2, CH4, NH3, H2 and very little O2
  • High temperatures due to asteroid collisions
  • High UV Radiation due to no ozone layer
  • Volcanic eruptions releasing CO2 and H2O into the atmosphere
  • Asteroid Bombardment
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2
Q

State what the conditions of prebiotic earth may have caused

A

A variety of carbon compounds to form spontaneously. ​

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3
Q

Discuss the challenges of defining matter as living or nonliving.

A

Life consits of:
- Physical structures of life like cells and DNA
- Physiological processes of life like growth and reproduction

Limitations:
- RBC don’t contain DNA, are they not alive?
- Aseptate fungal hyphae are not divided into individual cells, are they not alive?
- Bacteria lives within another cell and can’t reproduce outside its host, alive?

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4
Q

Discuss the reasons why cells are considered to be living.

A

They can undergo cellular processes:
- Can perform independent metabolism
- Can grow
- Can replicate themselves

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5
Q

Discuss the reasons why viruses are considered to be non-living.

A
  • Not made of cells
  • Do not grow
  • Can’t replicate themselves
  • Can’t perform independent metabolism
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6
Q

Outline the intermediate stages needed for the evolution of the first cells on prebiotic Earth.

A
  • Formation of simple organic molecules from inorganic compounds
  • Assembly of carbon compounds into polymers
  • Formation of a polymer that can self-replicate
  • Packaging of molecules into compartments
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7
Q

Explain 3 implications of cells being formed from preexisting cells

A
  • we can trace the origin of all the cells in our body to the first cell; the zygote produced by fertilisation of a sperm and egg
  • All cells can be traced back through billions of years of evolution to the LAST UNIVERSAL COMMON ANCESTOR of all life on Earth (LUCA)
  • There must have been a first cell that arose from non-living material
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8
Q

Discuss the 4 limitations in testing hypotheses about the evolution of the first cells.

A
  • Conditions were very differnt on early earth
  • it is impossible to replicate with certainty the conditions that would have existed on early earth
  • well-preserved fossils are rare
  • Methods used to estimate dates of the first living cells have ranges of uncertainty
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9
Q

Outline the methodology, results and conclusion that can be drawn from Miller and Urey’s experiments into the origin of biologically relevant carbon compounds.

A

Methodology:
- water was boiled in a flask to represent the ocean
- Ch4, NH3, and H2 were in a flask to represent the reduced atmosphere. Sparks fired between electrodes to simulate lightning
- cooling condenser turns the stream back into liquid water which drops down into a trap where molecules produced in the reactions can settle for collection

Results:
- Carbon compounds like amino acids were formed from inorganic compounds

Conclusion:
- Carbon compounds could have spontaneously formed on prebiotic Earth

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10
Q

Discuss the benefits and limitations of the Miller-Urey apparatus as a model for a natural phenomena.

A

Benefits:
- Direct observation and experimentation of early earth is not possible thus, the use of a model is required

Limitations:
The model may be oversimplified; the model does not include every single possible variable that may have influenced the formation of carbon compounds on prebiotic earth

  • Do not represent all aspects of a system as they are only as accurate as the scientific knowledge on which they are based on
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11
Q

Outline the cause and consequence of the spontaneous formation of membranes and vesicles by amphipathic molecules such as fatty acids and phospholipids on prebiotic Earth.

A

Cause:
- Fatty acids coalesce to form spherical structures called micelles - the hydrophobic fatty acid tails are tucked away from the water solvent

Consequence:
- Fatty acid micelles can form highly stable vesicles containing dissolved molecules

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12
Q

State what modern cells use as genetic material and what modern cells use as catalysts of metabolism

A
  • DNA as the genetic material
  • Enzyme proteins as catalysts of metabolism.
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13
Q

List properties of RNA that suggest it was the first genetic material.

A
  • RNA can self-replicate
  • RNA can act as catalysts for their own replication
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14
Q

Compare the genetic stability of RNA and DNA.

A

DNA replaced RNA as a more stable repository of genetic info:

  • Deoxyribose in the DNA sugar-phosphate backbone makes DNA chemically more stable than chains of RNA thus, greater lengths of DNA can be maintained without breakage
  • The H bonds holding together the double-helical structure of DNA add additional stability
  • The use of Thymine than Uracil further enhances DNA stability as Thymine is less susceptible to mutation than Uracil and those that mutate are easier to repair
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15
Q

Outline the ribosomal ribozyme as a type of RNA that is still used as a catalyst.

A

RNA that functions as a catalyst are called Ribozymes
- The ribozyme binds to a specific substrate molecule
- The ribozyme catalyses a reaction that changes the substrate by breaking or making chemical bonds
- The ribozyme releases the product and is ready to work on another substrate molecule

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16
Q

Define LUCA.

A

Last Universal Common Ancestor

17
Q

Discuss why the LUCA is not thought to be the first cell, but rather is thought to be the last common ancestor to all living cells.

A
  • There is evidence for the origin of carbon compounds and the spontaneous generation of cell-like structures with lipid bilayers
  • First cells were likely some sort of membrane surrounding a self-replication molecule like RNA
18
Q

List characteristics of the LUCA.

A
  • LUCA was an obligate anaerobe
  • LUCA was a chemoautotroph; obtaining energy from H2 and converting CO2 & N2 into essential organic compounds
  • LUCA was able to live in extreme heat
19
Q

Compare the estimated dates for the evolution of the first cells and of the LUCA cells to the age of Earth.

A

Earth is over 4.5 billion years old and there is evidence that life existed on Earth at least 3.8 billion years ago.

20
Q

State the 4 various approaches used to estimate the dates of the major events in the evolution of life on Earth

A
  • Chemical evidence
  • Biomarkers
  • Fossil evidence
  • Genetic evidence
21
Q

Describe stromatolites as the earliest direct evidence of fossilized life.

A

Stromatolites are structures created by photosynthetic bacteria that live in shallow water; minerals precipitate inside the sediment layers containing the trapped bacteria creating fossilised stromatolites even as the microbes die off.

22
Q

Outline the use of isotopes and the molecular clock for estimating the dates of the first cells and of the LUCA cells.

A
  • Isotopes in fossils may be the remains of living organisms; evidence of microscopic life can be trapped in the rocks and analysed using ratios of chemical isotopes
  • The molecular clock uses differences in the genomes of 2 species to tell how much time has passed since they shared a common ancestor as the genomes are proportional to the time since they diverged from a common ancestor
23
Q

Describe the conditions present at a white-smoker hydrothermal vent.

A
  • Extremely high pressure
  • Extremely hot (but not boiling as a result of the high pressure)
24
Q

Explain how knowledge of the genes present in the LUCA cells can provide evidence that the cells lived in the vicinity of hydrothermal vents.

A

General premises:
- Genes needed for anaerobic, chemoautotrophic metabolism were present in LUCA.
- Environment with conditions for anaerobic, chemoautotrophic metabolism are found in and around hydrothermal vents

Deduction leading to specific conclusion:
- LUCA must have lived in the vicinity of hydrothermal vents

25
Q

What did prokaryotes contribute to the development of an oxygen-rich atmosphere?

A

Produced O2 during photosynthesis hence,
- Changing atmosphere from a reducing one to an oxidising one
- More photosynthesis occurred than respiration
- Early atmosphere had a lack of O2