Adult General Genetics Flashcards

(87 cards)

1
Q

What is a primary cause of death

A

Sudden cardiac arrest

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2
Q

What are some structural cardiac abnormalities

A

Hypertrophic, arrhythmogenic, congenital (inc. Marfan), mitral valve prolapse/aortic stenosis

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3
Q

What are some electrical cardiac abnormalities

A

Wolff Parkinson White syndrome, congenital long QT (incl. Brugada syndrome), catecholaminergic polymorphic ventricular tachycardia (CPVT)

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4
Q

What are some acquired cardiac abnormalities

A

Infection (myocarditis), trauma (commotio cardis), toxicity (drugs), environment (hypo/hyperthermia)

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5
Q

What are 3 examples of cardiac disease types

A

Congenital heart disease
Cardiac muscle disease
Cardiac rhythm disturbance

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6
Q

What are some examples of cardiac abnormalities

A

Cardiac anatomy abnormalities - congenital heart disease, valvular heart problem, aortopathies

Cardiac blood supply abnormalities - coronary heart disease

Cardiac conduction abnormalities

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7
Q

Where should the heart be located

A

To the left

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8
Q

What are common causes of congenital heart disease

A

Chromosome
Trisomy 21 - atrio-ventricular septal defects
Di George syndrome (22q11.2 microdeletion) - Conotruncal disorders e.g. truncus arteriosus

Single gene disorders
Syndromic - CHARGE, Cornelia De Lange
Non-syndromic - NKX2-5 and MYH6 (can cause ASD also)

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9
Q

What are ciliopathies

A

Group of conditions with a wide number of abnormalities

Ahlstrom syndrome - lead to dilated cardiomyopathy

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10
Q

How is the foetal circulation different to the postnatal circulation

A

Oxygen tension in the umbilical vein is less than post-natal oxygenation from the lungs

Blood from umbilical vein flows into the ductus venosus which reduces the pressure > enters right atrium flows through foramen ovale and then diverted via the ductus arteriosus

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11
Q

What happens to the ductus venosus and arteriosis postnatally

A

The ductus venosus and arteriosus are artefacts post-natally

Closure of the ductus arteriosus becomes the ligamentum arteriosum by a decrease in prostaglandin

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12
Q

What are the three types of cardiomyopathy

A

Hypertrophic

Dilated

Arrhythmogenic

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13
Q

What is hypertrophic cardiac myopathy

A

Hypertrophic - thickening of the ventricular walls

Involves mutations in sarcomeric proteins

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14
Q

What is dilated cardiac myopathy

A

Dilated - most common cause for heart transplant, heart muscle fails, more non-genetic causes

Involves mutations in cytoskeletal proteins /sarcomeric

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15
Q

What is arrhythmogenic cardiac myopathy

A

Arrhythmogenic - aka arrhythmogenic right ventricular cardiomyopathy, but it affects both ventricles

Involves mutations in desmosomal proteins

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16
Q

What is used to detect the difference between cardiomyopathies

A

NGS panels as they are multigenic with overlap between phenotypes

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17
Q

Describe the two types of hypertrophic cardiomyopathy

A

Apical and septal, where apical is less likely to be due to genetic causes

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18
Q

What is the clinical presentation of hypertrophic cardiomyopathy

A

Syncope, chest pain, shortness of breath, sudden death

Syncope = fainting, due to ischaemia caused by hypertrophy of the ventricles, increased pressure upon contraction leading to chest pain and fainting especially during exercise

Hypertrophy can lead to myocardial disarray - becoming pro-arrhythmogenic

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19
Q

What can be seen on an ECG when looking for hypertrophic cardiomyopathy

A

Septal hypertrophy - tall R waves and abnormal Q wave

Apical hypertrophy - T wave inversion

Multifactorial - associated with diabetes, underlying cardiac diseases

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20
Q

What genes are involved in hypertrophic cardiomyopathy

A

Majority are those involved with the sarcolemma e.g. myosin, actin, troponin

Mysoin - MYH7 = 35% and MYBPC = 35%

Troponin I/T/C - TNNC1/2/3

Involved in calcium metabolism, more involved with rhythm disturbance at an early stage

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21
Q

What percentage of dilated cardiomyopathy is genetic

A

30-40%

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22
Q

What are some causes of dilated cardiomyopathy

A

Other aetiologies - ischaemic, drug Induced, alcohol, myocarditis (inflamed heart muscle), sarcoidosis (lumps of inflammatory cell/granulomata), autoimmune disease, post-partum

Post-partum and alcohol = predisposing due to existing titin mutations

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23
Q

What is the clinical presentation of dilated cardiomyopathies

A

Shortness of breath, cough, swelling of ankles, syncope, fatigue, arrhythmias

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24
Q

What genes are involved in dilated cardiomyopathy

A

Titin gene - aka connectin, molecular spring connecting the filaments between Z-lines
May just be a risk factor
A major player in dilated cardiomyopathy

RBM20
RMB20 facilitates the alternative splicing of various cardiac genes including titin and CPVT
Leads to dilated cardiomyopathy and arrythmia’s

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25
What are the characteristics of arrhythmogenic cardiomyopathy
Fibrosis/fatty infiltration of right ventricle BUT frequently involves the left ventricle May present with DCM phenotype 1st symptom is commonly sudden death on exercise Later presentation with Cardiac failure
26
What genes are involved in arrhythmogenic cardiomyopathy
Desmosome proteins, which adhere cardiac cells together, and allows messaging between the cells Faulty messaging can lead to fibrosis Lamin A/C - supports the nuclear membrane Mutations in these genes causes nucleus to collapse causing cell death Desmin - protein that fixes the sarcomere to other structures in the cardiac cell
27
What can treat arrhythmogenic cardiomyopathy
Implantable devices (pacemaker) treats rhythm while implantable defibrillator protects and only acts when needed
28
What are some cardiomyopathy genes and their inheritance patterns
Autosomal dominant with reduced penetrance - MYH7 in HCM Age related penetrance - MYBPC3 May present from foetal - old age MYH7 Autosomal recessive - Pompe’s X-linked recessive Fabry’s GLA X-linked Dominant with male lethality X-linked Dominant - Danon LAMP2 Oligogenic
29
What are channelopathies are the three types
Primary rhythm disturbances Long QT Brugada Syndrome Catecholaminergic Polymorphic Ventricular Tachycardia (CPVT)
30
What is Q-T interval
Q = when the heart is full while T = when the heart contracts/empties
31
What are the three types of long QT syndrome
LQTS1 - K - loss of function - 30-35% - easily treated with beta blockers LQTS2 - K - loss of function - 25-30% - mutation in KCNH2 LQTS3 - Na - gain of function - 5-10% - mutation in SCNA, worrying as it is triggered by sleep
32
What is Brugada syndrome
Abnormal ECG - identified in A&E when individual is sick Sodium channel blocker may trigger the abnormal pattern for investigation Beta blockers don't work, so may need ICD (implantable cardioverter-defibrillator)
33
What is CPVT
Rare but highly malignant, 30% with mutation in RYR2 Calcium channel for contraction, mutation may cause leakage of calcium especially under adrenaline Recurrent attacks upon exercise Resting ECG is normal, with a bidirectional alternating VT Can be treated partially with beta blockers, but ICD can be fatal due to shock causing adrenalin
34
What are some neurogenetic disorders and diseases
Obvious ones - epilepsies, neurodegenerative disease, movement disorders, neurofibromatoses Less obvious - mitochondrial disease, channelopathies, Diseases - Charcot-Marie Tooth Disease, Muscular Dystrophies, ALS/MND
35
Why is making a diagnosis important
To provide an explanation To allow screening/monitoring for other symptoms Guide treatments E.g. whether a person with epilepsy should have sodium valproate or not (mitochondrial disease?) There may be implications for other family members
36
How can you make diagnoses
Consider non-genetic and genetic causes - family history, are there other associated features etc. Diagnostic Testing Single Gene Testing Panel Testing Whole Exome/Genome Sequencing
37
If a baby is born with joint problems, reduced movement and the mother has difficulties in loosening grip what can be the cause
Myotonic dystrophy
38
What are the two types of myotonic dystrophy
Type 1 4 different subtypes - mild, classical, juvenile, congenital CTG Triplet repeat disorder in DMPK gene Type 2 Typically proximal muscle weakness, variable myotonia, no congenital form CCTG repeat in CNBP gene
39
What are the major effects of myotonic dystrophy type 1
Cognitive function - intelligence, behaviour, psychological disorders, excessive daytime sleepiness Vision - cataracts, retinal damage Endocrine system - diabetes, low thyroid hormone levels Respiratory system - breathing difficulties, aspiration, sleep apnoea, high risk for pneumonia Reproductive system Men - low testosterone, ED, testicular failure, gonadal atrophy Women - weakened uterine muscle, pregnancy complications and gynaecological problems Cardiovascular system - heart condition abnormalities, arrythmias, cardiomyopathy GI tract - swallowing issues, abdominal pain, IBS, constipation/diarrhoea, poor nutrition, weight loss Muscle - weakness, wasting/atrophy, myotonia, pain Also - skin bone and immune anomalies
40
What symptoms may a neonate with congenital myotonic dystrophy have
Poor motivation, concentration, ADHD, ASD, mental retardation or delays, speech problems Swallowing and feeding difficulties, bowel and bladder delays Possible club feet, tight heel cords, AFO or braces Poor head control, ear infections, facial weakness Respiratory distress, may have breathing problems at birth, mechanical ventilation Floppy baby, poor muscle tone
41
What is the pathophysiology of myotonic dystrophy
CTG expansion in non-coding region of DMPK Imperfect double stranded hairpin RNA structure ``` Toxic RNA gain of function Gene missplicing Transcriptional dysregulation Abnormal protein translation Activation of cellular stress pathways - mitochondrial and metabolic ```
42
What is the molecular diagnosis of myotonic dystrophy
PCR detects alleles containing 5 and 125 CTG repeats and can be accurately sized TP-PCR uses 3 primers and creates products of differing lengths with large repeats being detectable but not sizeable Southern blotting used for accurately sizing DNA fragments
43
What is anticipation (triplet repeat)
Unstable/dynamic expansions therefore can increase in size in next generation Anticipation This occurs in repeat expansion disorders, as the repeat region grows Symptoms can present earlier and earlier in subsequent expansion Instability may depend on parent of origin - maternal in MD, paternal in huntington's General correlation between size of expansion and severity of the disorder
44
Is the triple expansion repeat instability of myotonic dystrophy influenced more maternally or paternally
Maternally
45
Is the triple expansion repeat instability of Huntington's disease influenced more maternally or paternally
Paternally
46
What us Huntington's disease
Adult onset neurodegenerative disease, dominantly inherited C-A-G triplet repeat expansion Main features are chorea, dementia and neuropsychiatric disease Antisense oligonucleotides can target RNA and prevent protein transcription - also used in spinal muscular atrophy
47
What is spinal muscular atrophy caused by
Recessive CNV in SMN1 - loss of protein production The SMN2 gene only produces a small amount of functional protein, genetic artefact, oligonucleotides can help stimulate the 90% that usually does not get translated into protein Causes problems with muscles in neonatal period, can lead to muscular weakness and death
48
What is the genetic risk of Alzheimer disease
Approximately 25% of all AD is familial (i.e., ≥2 persons in a family) Of which 95% is late onset ( >60-65 years), 5% is early onset (<65 years)
49
What are the symptoms of Alzheimers disease
Slowly progressive memory difficulties Confusion, poor judgment, language disturbance, agitation, withdrawal, and hallucinations Occasionally, seizures, Parkinsonian features, increased muscle tone, myoclonus, incontinence, and mutism
50
How can you diagnose Alzheimer's disease
Clinical signs - slowly progressive dementia Neuroimaging Gross cerebral cortical atrophy on CT or MRI Diffuse cerebral hypometabolism on PET Cerebrospinal fluid (CSF) - decreased Aβ amyloid 42 and increased tau Neuropathological Findings at postmortem – 80-90% concurrence with clinical diagnosis
51
What are the causes of early onset familial Alzheimer's disease
Mean Onset <65 years, Autosomal Dominant ``` Chance of finding a mutation in a simplex case is LOW <6% APP (10-15%) 1.4% PSEN1 (30-70%) 4% PSEN2 (<5%)1% Other loci ```
52
What is a key Alzheimer's disease genetic risk factor
ApoE
53
What does the apoE gene do
ApoE encodes a polymorphic glycoprotein expressed in liver, brain, macrophages, and monocytes ApoE participates in transport of cholesterol and other lipids Involved in neuronal growth, repair response to tissue injury, nerve regeneration, immunoregulation, and activation of lipolytic enzymes
54
What are the apoE variants
The APOE gene contains three major allelic variants at a single gene locus (ɛ2, ɛ3, and ɛ4) Encodes different isoforms (ApoE2/3/4) that differ in two sites of the amino acid sequence.
55
What is the risk variants associated with ApoE
The APOE ɛ4 allele increases risk in familial and sporadic early-onset and late-onset AD ○ x3 risk for APOE ɛ34, x15 for APOE ɛ44, 40–65% of AD patients are ɛ4 carriers The effect of APOE ɛ4 accounts for 27.3% of the estimated disease heritability of up to 80% The APOE ɛ2 allele is thought to have a protective effect 20–25% of the general population carries one or more ɛ4 alleles
56
How significant are the apoE risk variants
Up to 75% of individuals heterogeneous for APOE ɛ4 do not develop AD during life Up to 50% of people with AD do not carry the high-risk ɛ4 allele The case for testing and the risks associated with other genes is even weaker
57
Why is finding risk variants important
Insight into pathogenic mechanisms Druggable targets Risk stratification in clinical trials There is limited clinical utility in the context of the individual patient
58
What is the aorta, describe its pathing
Main blood vessel/artery leading out of the heart, exiting the left ventricle and loops out into an arch The arch leads upwards to supply the head, neck and arms The descending aortas becomes the abdominal aorta once it passes the diaphragm and innovates everything else including the kidneys and legs Descending aorta can be divided into the thoracic and abdominal
59
What are the three aortopathies categories (not diseases/syndromes)
Aortic aneurysm Aortic dissection Aortic regurgitation
60
What is an aortic aneurysm
The aorta is pretty smooth, slightly dilateds it leads out of the heart Aneurysm = pathological dilatation Most common site being in the abdominal aorta, mainly due to environment Burst can be fatal - treated by implanting a graft/mechanical valve/tube
61
What is an aortic dissection
A partial tear in the wall of the aorta The aorta has two layers, blood accumulates into the second layer forming a 'false lumen' At this point an aneurysm can become symptomatic E.g. compression on nerve, push on oesophagus
62
What is an aortic regurgitation
Aortic value fails to close, allowing blood to leak backwards Blood re-enters into the left ventricle Can be due to primary pathology in the valve itself Or due to aneurysms, because of the dilatation pulling the valves apart
63
What are examples of aortopathy diseases/syndromes
Marfan syndrome Loeys-Dietz syndrome Collagenopathies Non-syndromic thoracic aortic aneurysm - harder to identify as there are no obvious external features
64
What type of disorder is Marfan syndrome
Connective tissue disorder
65
How do males and females vary with Marfan syndrome
Incidence is same | Men have shorter life expectancy
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What is the inheritance pattern of Marfan syndrome
AD, with variable expressivity
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What is the common gene involved in Marfan syndrome
Fibrillin-1 (FBN1) - a microfibril glycoprotein in elastic/non-elastic tissues, part of extracellular matrix ~25% de novo mutations / ~75% inherited and > 97 different mutations Diagnostic yield 66-91% of cases
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What are the features of marfan syndrome
Long limbs/fingers, downslant eyes, flattened cheek bones, lower jaw pushed back, deep set eyes
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What symptoms and systems are affected by Marfan syndrome
Cardiac - mitral valve prolapse, aortic root dilation Head/neck - myopia (nearsightedness), lens dislocation (ectopia lentis), high palate and crowded dentition Chest - spontaneous pneumothorax Neurologic - dural ectasia Skin - stretch marks Musculoskeletal - tall, along arm spam, long digits, scoliosis, hypermobility and more
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What is the Ghent criteria
Used to diagnose Marfan syndrome in absence of family history
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What are the cores for the Ghent criteria to diagnose Marfan syndrome
Aortic root Z-score ≥ 2 AND ectopia lentis Aortic root Z-score ≥ 2 AND FBN1 mutation Aortic root Z-score ≥ 2 AND systemic score ≥ 7 Ectopia lentis AND FBN1 mutation associated with aortic aneurysm
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What is used to diagnose Marfan syndrome when there is a family history
Either of the following Ectopia lentis Systemic score ≥ 7 Aortic root Z-score ≥ 2
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What is the aortic Z-score
Statistical term to normalise the aortic size to the standard for a person of that age and size This is because aortic diameter varies depending on various factors Aortic score >2 meaning above 2 SD from the normal
74
What are the cardiovascular features of Marfan
Most common cause of morbidity/mortality (~80%) Aortic root disease > aneurysms, AR, dissection 50% of children, 80% of adults May lead to neurovascular complications Mitral valve prolapse (minor criterion Most common valve defect 60-80% Worsens with time, complicated by rupture Arrhythmias
75
What is the progression of Marfan syndrome
Prognosis can be poor if diagnosed in infancy/childhood Severe Marfan can include deforming skeletal anomalies • Later-onset symptoms: ○ Cataracts, retinal detachment, easy bruising (but normal wound healing), stretching of the spinal dura with neck/abdominal pain, osteoporosis, risks in pregnancy (e.g. vascular)
76
What are the early manifestations/symptoms of Marfan syndrome
Early manifestations: Heart: abnormal echo (96%), aortic root enlargement (84%), mitral valve prolapse (58%) Eyes: ectopia lentis (70%), myopia (60%) Skeletal: pectus deformities (68%), scoliosis (44%), flat feet (44%) Height >95th centile (56%), arachnodactyly (88%), striae (24%)
77
What are the later-onset manifestations/symptoms of Marfan syndrome
Cataracts, retinal detachment, easy bruising (but normal wound healing), stretching of the spinal dura with neck/abdominal pain, osteoporosis, risks in pregnancy (e.g. vascular)
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What is the screening options for Marfan syndrome
At least annual evaluation Clinical history Examination Echocardiography Consider aortic root surgery when the aortic diameter at the sinus of Valsalva exceeds 5 cm Enhanced monitoring in pregnancy (risk of aortic dissection if the aortic diameter exceeds 4 cm)
79
What is pharmacotherapy
Beta blockade Calcium channel blockers ARB's (Angiotensin II receptor blockers)
80
What is Loeys Dietz syndrome
Autosomal dominant inherited connective tissue disorder
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What genes are involved in Loeys Dietz syndrome
TGFBR1~20%-25%, TGFBR2~55%-60%, SMAD3~5%-10%, TGFB2~5%-10%5.TGFB3~1%-5%, SMAD2~1%-5% Differential diagnosis to Marfan - rarer, exact prevalence unknown and ocular features absent
82
What are the cardiovascular symptoms of Loeys Dietz syndrome
Cardiovascular - arterial tortuosity, congenital heart defects (ASD, PDS, BaV) • Eyes, Head and Neck ○ Widely-spaced eyes (hypertelorism), blue-gray sclerae, wide or split uvula, cleft palate, cervical spine instability or malformation Skin - easy bruising, wide scars, soft skin texture, translucent skin Bones - club foot (talipes equinovarus), osteoporosis Gastrointestinal problems - malabsorption, diarrhoea, abdominal pain, bleeding, inflammation, other Other - allergies (food/environmental), spleen/bowel rupture, uterine rupture during pregnancy
83
What is one cardiac symptom different in Loeys Dietz syndrome vs Marfan
Aortic dissection occurs at smaller diameters than in Marfan Vascular disease not limited to the aortic root, requires MRI scan to look at other vessels
84
What are the treatments of Loeys Dietz syndrome
Beta-adrenergic blockers or other medications are used to reduce hemodynamic stress Aneurysms are amenable to early and aggressive surgical intervention Surgical fixation of cervical spine instability may be necessary to prevent spinal cord damage Standard treatment for club feet and severe pes planus Craniofacial management for cleft palate and craniosynostosis
85
What are collagenopathies
Genetic conditions which affect the collagen genes Includes Ehlers-Danlos syndrome and other connective tissue disorders
86
What is thoracic aortic aneurysm disease (TAAD)
Can be syndromic or non-syndromic There is a wide range of genes - some involved can overlap with those seen in syndromic diseases TGFBR1/2, MYH11, FBN1, SMAD3, MYLK, ACTA2
87
What are the classifications of genes associated with TAAD
Muscle contraction - problems = more prone to be stretched, causing aneurysm ECM - provide structural support = more prone to being stretched TGFB - interacts with some of the ECM, and affects activation of transcription