Amino Acids and peptides Flashcards

(63 cards)

0
Q

Carbon in which all four groups attached are different

A

Chiral carbon

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1
Q

Amino acid and carboxylic group attach in the same alpha carbon

A

Alpha amino acids

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2
Q

All amino acids have chiral carbon except

A

Glycine

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3
Q

Absolute configuration of amino acids

A

Glyceraldehyde

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4
Q

Configuration of all amino acids derived from natural proteins

A

L configuration

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5
Q

Total number of amino acids in all forms of life

A

20

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6
Q

Amino acids with aliphatic side chain

A

Leucine, isoleucine, valine, alanine, glycine

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7
Q

Amino acids with side chains containing -OH groups

A

Threonine, tyrosine, serine

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8
Q

Amino acids containing side chains with sulfur atoms

A

Cystein, methionine

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9
Q

Amino acids with side chains containing acidic/amide groups

A

Aspartate, asparagine, glutamate, glutamine

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10
Q

Amino acids with side chains containing basic groups

A

Lysine, histidine, arginine

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11
Q

Amino acids containing side chains with aromatic rings

A

Tryptophan, histidine, phenylalanine, tyrosine

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12
Q

Imino acid

A

Proline

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13
Q

Ala (A)

A

Alanine

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14
Q

Arg (R)

A

Arginine

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15
Q

Asp (D)

A

Aspartate

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16
Q

Asn (N)

A

Asparagine

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17
Q

Cys (C)

A

Cysteine

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18
Q

Glu (E)

A

Glutamate

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19
Q

Gly (g)

A

Glycine

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20
Q

His (H)

A

Histidine

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21
Q

Ile (I)

A

Isoleucine

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22
Q

Lys (K)

A

Lysine

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23
Q

Met (M)

A

Methionine

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24
Phe (P)
Phenylalanine
25
Pro (O)
Proline
26
Ser (S)
Serine
27
Thr (T)
Threonine
28
Trp(W)
Tryptophan
29
Tyr (Y)
Tyrosine
30
Val (V)
Valine
31
Essential amino acids
Phe, val, thr, trp, ile, met, his, leu, lys | Pneumonics: PriVaTe TIM HeLL
32
Non-essential amino acids
Glu, asp, asn, ala | Pneumonics: GAAA
33
Conditional amino acids
Gln, pro, arg, ser, tyr, cys, gly
34
Referred to as 21st amino acid
Selenocysteine
35
Atom that replaced sulfur of cysteine to turn it into selenocysteine
Selenium
36
Which is stronger, R-COOH or R-NH3+?
R-COOH
37
Determined by the pH at which the protonated and unprotonated species is present in equal concentration
pK of an acid
38
Amino acid molecule that has no net charge
Zwitterions
39
T/F? Net charge of amino acids depends upon the pH of the surrounding solution.
True
40
T/f? Functional groups present on amino acids has the same pKa values.
False
41
PH at which an amino acid bears no net charge
Isoelectric pH
42
T/f? Varying the pH of the medium does not alter the cgarhe of the amino acids.
False
43
Charge of amino acid at pH < pI
Positive
44
Charge of amino acid at pH > pI
Negative
45
General properties of amino acid
Soluble in polar solvent, insoluble in non polar solvent, high melting point, do not absorb visible light except aromatics
46
T/f? Specific properties of the amino acids are dictated by the nature of their R groups
True
47
Smallest amino acids allowing it to fit in regions that are inaccessible to other amino acids
Glycine
48
Hydrophobic and occurs in the interior of proteins
Amino acids with aliphatic/aromatic R group
49
Nucleophile, functions as such during enzymatic catalysis
-OH of ser and -SH of cys
50
Undergoes phosphorylation which regulates enzyme activity
-OH of ser, tyr, thr
51
Functions as either a base or acid catalyst at neutral pH
Imidazole group of his
52
Used in detecting a.a. that forms aurple product with alpha a.a. and yellow with imine groups of proline
Ninhydrin
53
Consist of 2 or more a.a. residues linked by peptide bond
Peptides
54
Exhibits partial double bond character
Peptide bond
55
Sample treatment with CuSO4 | Color: purple
Biuret test
56
T/f? Formation of peptides from amino acids is accompanied by a net loss of one positive and one negative charge per peptide bond formed.
True
57
T/f? Peptides are uncharged at physiologic pH because of their terminal carboxyl and amino groups and when present the charger R group
False, charged
58
T/f? pKa values of functional groups will not depend upon its location within a given protein
False, depend
59
Smooth muscle hypotensive agent liberated from specific plasma proteins
Bradykinin
60
Polypeptide antibiotics
Gramicidin
61
Participates in the formation of correct disulfide bonds of many proteins
Glutathione
62
Artificial sweetene
Aspartame