amino acids info Flashcards

(31 cards)

1
Q

what is the glue that holds amino acids together

A

alpha carbon

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2
Q

alpha carbon is bonded to four groups…

A

amino group (-NH2), carboxyl group (-cooh), a hydrogen atom, and a unique side chan (-r)

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3
Q

all amino acids are chiral except for

A

glycine

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4
Q

human body only uses what kind of amino acids (L or D)

A

L-amino acids

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5
Q

L-amino acids

A

point to the lect in a fischer projection

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6
Q

the amino group is a base that is

A

typically protonated in the environment of the cell (NH^+)

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7
Q

the carboxylic acid functional group is typically

A

deprotonated in the aqueous environment of the cell, giving it a negative charge (COO-)

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8
Q

ions whose charges cancel out, producing a molecule with net neutral charge

A

zwitterions

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9
Q

amino acids whose R-groups contain non-aromatic hydrocarbon chains

A

non-polar alipathic

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10
Q

amino acids whose R-groups contain aromatic rings, except for histidine

A

non-polar aromatic

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11
Q

amino acids that can be either charged or uncharged

A

polar amino acids

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12
Q

amino acids with acidic residues (aspartic and glutamic acid) have an additional BLANK charge (aside from the one at their C-terminus) at physiological ph

A

negative

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13
Q

amino acids with basic residues (lysine and arginine) have an additional BLANK charge (aside from the one at their N-terminus) at physiological ph

A

positive

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14
Q

what amino acid is neutral at physiological ph

A

histidine

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15
Q

if glycine or proline are added into a protein, they will often

A

destabilize (break down) local alpha-helical secondary structure

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16
Q

what amino acids are targets of phosphorylation

A

serine, threonine, and tyrosine

17
Q

addition of a negatively charged phosphate to a molecule, which often changes the structure or function of that molecule

A

phosphorylation

18
Q

what amino acids can mimic the presence of a phosphate group

A

aspartic acid and glutamic acid

19
Q

cysteine is sometimes able to produce covalent BLANK bonds with other cysteine residues, holding together the subunits of a polypeptide

20
Q

basic and acidic residues can interact to form BLANK due to other attractive positive and negative charges

21
Q

a covalent BLANK bond can form between the sulfur-containing R groups of two cysteine molecules

A

disulfide bond

22
Q

disulfide bonds form between cysteine residues under BLANK conditions

A

oxidizing (high ph)

23
Q

disulfide bonds can be broken under BLANK conditions

A

reducing (low ph)

24
Q

a molecule composed of two or more amino acids

25
the bond connecting together the two amino acids
peptide bond
26
when an amino group of one amino acid nucleophilically attacks the carboxyl group carbon of another amino acid. linking the two molecules together and releasing a water molecule, what happens
a peptide bond forms
27
when a peptide bond is formed, the amino and carboxyl group have been transformed into an
amide
28
peptide bond formation(condensation) is endergonic or exergonic?
endergonic (needs energy)
29
peptide bond can only be broken by BLANK
hydrolysis
30
peptide bonds are cleaved with the addition of a water molecule
hydrolysis
31
peptide bond breaking (hydrolysis) is endergonic or exergonic
exergonic (releases energy)