Biochem Flashcards

(44 cards)

1
Q

Cystinosis

A

AR, CTNS
Unlike all other LSD’s
FTT, Cornea cystals & photophobia, renal failure, ID, CNS calcifications
tx: cysteine reducer
Mut spectrum: 50% SNV, 50% CNV

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2
Q

Fabry disease

A

XL, GLA
Neuropathic pain, cardio arryhythmia, white matter hyperintensities, angiokeratomas (male genetalia), cornea verticillata
dysautonomia w/ anhirdrosis; end stage=renal failure
Biomarker=GL3 in urine (enzyme activity is unreliable)
tx=ERT (algalsidase A or B) or chaperone therapy (migalastat)
dx: in females, enzyme is unreliable, can only be done molecularly

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3
Q

Metachromatic leukodystrophy

A

; AR ASA
late infantile: hypotonia, clumsiness, Dev. regression, neuropathy, seizures, HL; sparing of U shaped fibers buzzword
Juvenile: intellectual decline, clumsiness, incontinence, seizures
adult: psychiatric, neuro regresion
common pseudodef. allele
tx: HSCT + ERT approved in 2024

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4
Q

Krabbe disease:

A

AR, GALC
on RUSP!
Infantile: peripheral neuropathy, extreme irritability, hypertonia (opisthonic posture), spasticity
Juvenile: gait disturbance, peripheral neuropathy, dev. regression
Adult: gait disturbance, peripheral neuropathy, dev. regression
pathology: globoid macrophage cells
dx: screen is elevated psychosine, but diagnosis is leukocyte enzyme activity
tx: stem cell transplant, poor prognosis
common 30kb deletion

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5
Q

Farber disease;

A

AR ASAH1
triad of joint nodules, joint stiffness, hoarse voice
severe form: NDD, similar to krabbe
Tx: HSCT

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6
Q

Gaucher disease:

A

AR, GBA
High in AJ pop, carriers high risk for parkinson’s (most common risk factor for parkinson)
most common LSD
Type 1: hepatosplenomegaly, bone crises, erlenmeyer flask deformity, cytopenias
type 2 (most severe): early onset neuro involvement (eye movt, swallowing issues), neurodegeneration, lifespan <2y
type 3: type 1 findings + subacute & progressive neuro (DD, epilepsy, horizontal saccades)
dx: enzyme activity in leukocytes; monitor w/ glucosylsphingosine
tx: ERT (imiglucerase) for type 1 or Miglustat/Eliglustat (substrate reduction); (none effective for neuro symptoms)

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7
Q

Niemann-Pick A/B;

A

AR, SMPD1
Progressive
A: hepatosplenomegaly by 3mo, cherry red macula, neuro deterioratioin, deathy by 3y
B: later onset, bruising, variable NDD, survival into adulthood
tx: ERT (olipidase alfa), boardable now since there is adrug

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8
Q

Niemann-Pick type C:

A

AR, NPC1/2
non-enzyme LSD, this affects a transporter
hepatosplenomegaly, cholestasis, FTT, liver failure, supranuclear gaze palsy
late onset form includes movement dx and psychosis too
tx: miglustat
dx: best is genetics, positive filipin staining

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9
Q

GM1 gangliosidosis:

A

AR, GLB1
beta-galactosidase enzyme def. (same gene as Morquoio, but different part of gene is mutatedjnhhhhm
pheno is similar to GM2 (tay-sachs/sandhoff), but more variable bone changes
infantile: skeletal dysplasia, hepatosplenomegaly, dev. arrest, hypotonia, cherry red macula, death <2y
juvenile: loss of walking, hip dysplasia, vision loss (no cherry red macula), seizures, death mid teens
adult: gait disturbance, dysarthria, intellectual regression, death age is variable
Tx: none

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10
Q

Tay Sachs:

A

AR, HEXA
High in AJ
Neurodegeneration & cerebellar atrophy,
Infantile: startle response, macular cherry-red spot, blindness, hypotonia, seizures, spasticity
Late-infantile: ataxia, spasticity, seizures
Adult: movement dx
Dx: enzyme activity (beware of pseudodeficiency alleles), do not test women’s serum for tay-sachs
tx: none

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11
Q

Pompe disease,

A

AR, GAA
on RUSP
Progressive muscle damage (heart, skeletal, respiratory), can mimic muscular dystrophy
Early onset: profound hypotonia + hypertrophic cardiomyopathy (shortening of PR interval)
Late onset: limb-girdle myopathy, no cardiac involvement
late onset SNHL in treated survivors
tx: ERT (alglucosidase A), earlier is best, CRIM status is important here
dx: enzyme activity

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12
Q

Neuronal ceroid lipofuscinoses (NCL),

A

CLN2
most common neurometabolic dx
seizures, vision loss, cognitive regression, ataxia, spasticity
dx: mostly genetics
tx: ERT (injected into brain)

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13
Q

MPS I (Hurler):

A

AR, IDUA
on RUSP!
elevated HS & DS- so bone and brain invlovement
normal dev. for first few months
coarse facial features, ID, corneal clouding, dysostosis multiplex, hepatosplenomegaly
Severe: death by 10-12y
Attenuated: normal intellect, HL, hepatosplenomegaly, death by 20-30 w/o intervention
Diagnosis: screen w/ urine GAGs, diagnosis w/ enzyme testing
tx: stem cell transplant (HSCT), ERT prior to HSCT. but ERT never makes it to brain

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14
Q

MSP II (hunter):

A

XL, IDS
on RUSP!
only XL MPS, so think hunters are male. like MPS1, but only for males
elevated HS & DS- so bone and brain invlovement
coarse facial features, ID, no corneal clouding, dysostosis multiplex, hepatosplenomegaly
thickened skin lesions and slate grey macules (mongolian spots) are unique
attenuated form: little/no NDD; lifespan can be normal
Diagnosis: screen w/ urine GAGs, diagnosis w/ enzyme testing; molecular tests miss 20% of variants d/t deletions/rearrangments
tx: ERT (not effective for CNS). HSCT not effective

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15
Q

MPS III (Sanfillipo);

A

AR 4 genes
purely NDD, (only HS is elevated), fewer dysmorphic features
childhood alzheimers, aggressive behaviors, seizures, DD, regression
Tx: none

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16
Q

MPS IV (Morquoio):

A

AR, GALNS, GLB1
only KS elevated (no NDD)
extreme dwarfism, contractures, corneal clouding, poor dentition
tx: ERT (Vimizim)
dx: enzyme analysis

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17
Q

MPS VI (Maroteaux-lamy):

A

AR, ARSB
elevated DS, normal intellect
coarse features, corneal clouding, short stature, hepatomegalcy
tx: ERT (naglazyme)

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18
Q

MPS VII (Sly):

A

AR, GUSB
HS+DS
short, coarse facies, NDD, hepatosplenomegaly (looks like mps1/2)
hyrops fetalis is most common presentaiton
tx: ERT (vestronidase alfa)

19
Q

Mucolipidoses

A

like all LSDs in one since this is caused by a phosphotransferase that activates all LSD enzymes
enzyme levels will be high in blood, but can’t get into cells
I cell disase (GNPTAB): like a severe MPS, onset at birth
dx: massive GAG increase in urine
Pseudo-hurler: like MPS I

20
Q

Zellweger spectrum:

A

AR, PEX genes
NDD, hepatomegaly, bone stippling, dysmorphic features, vision/hearing loss
dysmorphic features: large fontanelle, high forehead
dx: VLCFA elevated (NBS), pristanic/phytanic acid elevated

21
Q

XL-ALD:

A

XL, ABCD1
Most common peroxisome dx, on RUSP, childhood onset & progressive
Adrenal insufficiency (bronze skin), Severe cerebral anomalies, posterior white matter changes on MRI (T2 hyperintensity)
impaired cognition, vision/hearing loss, ataxia, spasticity
psychiatric changes, irritability, progressive demetnia
Dx: elevated VLCFA (NBS C26:0)
tx: corticosteroid replacement for adrenal insuff., HSCT, or gene therapy autotransplantation (elivaldogene autotemcel)
treatment guidelines- positive NBS isn’t enough to start treatment, need to see MRI lesions and declining neuro function
but treatment only works if presymptomatic

22
Q

Refsum disease:

A

AR, PEX7
late childhood RP, anosmia, motor neuropathy, ichthyosis, short metacarpals, cardiac arrhythmia
dx: elevated phytanic acid

23
Q

Rhizomelic chondrodysplasia

A

AR, PEX7
proximal shortening of the humeri, punctate calcifications in cartilage, coronal clefting of the several vertebrae and congenital cataracts
dx: low plasmalogen, normal VLCFA

24
Q

Glycogen storage dx

A

themes: looks like MPS1/2 hepatomegaly +/- hypoglycemia, FTT, dysostosis multiplex, cherry red spots, angiokeratomas
type 1: hepatomegaly, hypoglycemia, doll like facies, short stature
tx: contunous feeding, cornstarch
Type 3: like type 1, but milder
Type 0: glycogen syntahse def. looks like type 1, but excellent prognosis
Type V (Mcardle’s disease)
muscle weakness & cramping, second wind phenomenon (fatigue at first, but ok once warmed up)
onset in adulthood
tx: glucose w/ exercise

25
PKU:
AR PAH accumulation of Phe- enzyme that breaks it down is deficient tx: Phe reduced diet, ensure sufficient tyrosine, provide co-factor (tetrahydrobiopterin) maternal PKU: phe is teratogenic> ID, microcephaly, IUGR, CHD dx: PAA
26
Homocysteinuria:
AR CBS DD/ID, marfanoid habitus (no joint laxity), thromboembolism tx: dietary methionine restriction, cofactor (Vit B6) addition, Cystein supplementation dx: PAA+total homocysteine
27
Tryosinemia;
AR FAH Acute liver failure, renal disease, painful parasthesias, autonomic signs, malignancy risk build up of succinylacetone- toxic byproduct, depresses mone marrow function, causes GI upset tx: restrict tyrosine, (NTBC- blocks pathway before succinylacetone can be produced) dx: PAA+Succinylacetone
28
OTC deficiency:
XL most common urea cycle dx hyperammonemia> braine swelling and other intoxicating effects above tx: protein restsriction, ammonia dialysis, arginine/citrulline supplementation, low fat diet Arg is the key step to making urea and getting rid of ammonia, so supplementation can help overcome any single deficiency dx: PAA+ ammonina
29
Non-ketotic hyperglycinemia
non-essential AA, so body will keep making it, even if diet is restricted Intoxicating features + prenatal "hiccups", postnatal apnea, intractable seizures w/ burst suppression pattern dx: inc. CSF:plasma glycine ratio tx: Benzoate (NMDA blocker), but mostly ineffective (substrate reduction not helpful); ketogenic diet to reduce glycine levels
30
Maple syrup urine disease:
block in metab. of branch chain AA's; leucine is the toxic one Intoxication + fencing/bicylcing movements, focal dystonia, burnt sugar odor of urine; no acidosis dx: inc Leu, Iso, Val; accumulation of alloisoleucine is pathognomonic tx: restrict Leu, Iso, Val; dialysis, Vit B1 supplemenation
31
Proprionic Acidemia/Methylmalonic Acidemia
sequential steps in isoleucine/valine catabolism, also needed for Met, Thr, and odd-chain FA breakdown (VOMIT) PA accumulates in both Intoxication + ketosis, hyperammonemia, lactic acidosis, bone marrow suppression, cardiomyopathy, renal failure PA tx: dietary VOMIT restriction, oral antibiotic (to suppress bacteria making these aa's), dialysis, B7 supplemenation, citrate supplementation; carglumic acid supp. MMA tx: dietary VOMIT restriction, dialysis, B12 supp (adenosylcobalamin), citrate supp. dx: Urine organic acids, elevated c3
32
Isovaleric Acidemia
like MMA/PA, but milder sweat foot odor tx: protein/leucine restriction, dialsysis dx: elevated C5-OH
33
Glutaric acidemia type 1
macrocephaly, severe dystonia, frontal lobe atrophy tx: lysine & Trp restriction, arginine & carnitine supp, Riboflavin supp dx: urine organic acids
34
Galactosemia;
AR GALT brain damage, cataracts, jaundice, kidney damage, ID unable to metabolize milk (galactose) tx: lactose free milk Duarte galactosemia: reduced, but not absent enzyme. No need for dietary restriction dx: gal-1-p and enzyme levels Q188R most common (70%), 9 variant panel detects 90% of vars
35
Fatty Acid oxidation
converts fats> acetyl coA (used for krebs cycle, cholesterol syn, ketone production) hypoketotic hypoglyemia is key feature
36
Carnitine cycle
transports FA's to mito CPTII common- teen onset excercise induced rhabdomyolysis severe infantile form=multiorgan failure
37
VLCADD & LCHADD
cardiomyopathy, muscle weakness + rhabdo LCHADD-Mothers whose unborn child has LCHAD have an increased risk for HELLP syndrome (severe pre-eclampsia, hemolysis, elevated liver enzymes and low platelet counts) during pregnancy
38
MCAD
most common, no heart/muscle involvement High risk for SIDS Postive NBS= C6, C8. Emergency as hypoglycemia can be lethal
39
Biotinidase def.
essential cofactor for PA, pyruvate carboxylase, and 3-methylcrotonyl-coA carboxylase seizures, rash (deep fried baby), hypotonia, HL, alopecia dx: NBS, enzyme levels tx: biotin supp
40
Colbamin (B12) deficiency
CblC- most common FTT, DD, episodic acidosis tx: betaine, folic acid supp
41
Type 1a GSD (von Gierke)
hepatomegaly, renomegaly, hypoglycemia and lactic acidosis. dx- liver ezyme or sequence
42
Arginase deficiency
late onset hyperammonemia (after newborn period), progressive NDD
43
Sialidase deficiency
fetal hydrops
44
Pycnodysostosis
cathepsin K, lysosomal enzyme skeletal dysplasia