biyokimya lab Flashcards

(29 cards)

1
Q

What is the general purpose of chromatographic methods?

A

To separate, purify, and analyze components in a mixture.

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2
Q

What are the two basic components of chromatographic techniques?

A

Stationary phase and mobile phase.

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3
Q

What serves as the stationary phase in Paper Chromatography?

A

Cellulose-based filter paper.

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4
Q

What is the principle behind Paper Chromatography?

A

Separation by dispersion differences.

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5
Q

How is the Retention Factor (Rf) value calculated?

A

Spot distance ÷ solvent front distance.

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6
Q

Main advantage of Thin Layer Chromatography (TLC) over Paper Chromatography?

A

Can handle harsh chemicals like acids.

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7
Q

What is the TLC stationary phase made of?

A

Silica, alumina, or cellulose on plates.

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8
Q

TLC is based on which principle?

A

Adsorption.

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9
Q

How does Gel Permeation Chromatography separate proteins?

A

By size — large molecules elute first.

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10
Q

What is the separation principle of Ion Exchange Chromatography?

A

Based on charge differences.

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11
Q

Why is Affinity Chromatography so efficient?

A

Uses highly specific binding for near 100% purification.

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12
Q

Name one interaction used in Affinity Chromatography.

A

Antigen-antibody (also: enzyme-substrate, etc.).

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13
Q

Key disadvantage of Gas Chromatography?

A

Only works with volatile, low-molecular-weight samples.

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14
Q

What does HPLC stand for and one use?

A

High Pressure Liquid Chromatography; separates non-volatile compounds.

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15
Q

Three stages of DNA isolation?

A

Cell lysis, protein removal, DNA purification.

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16
Q

Why is EDTA used in DNA isolation?

A

It chelates Mg²⁺, stopping nuclease activity.

17
Q

Role of Phenol and Chloroform in DNA isolation?

A

Remove and denature proteins.

18
Q

How is DNA precipitated from solution?

A

Add cold alcohol (ethanol/isopropanol).

19
Q

Preferred temp for long-term DNA storage?

20
Q

Why store DNA in aliquots?

A

Prevents damage from repeated freeze-thaw cycles.

21
Q

At what wavelength do nucleic acids show max absorbance?

22
Q

What does an A260/A280 ratio of ~1.8 mean?

A

DNA is pure, little protein contamination.

23
Q

What does a low A260/A230 ratio suggest?

A

Contamination by organics (e.g. phenol).

24
Q

Absorbance of 1 at 260 nm equals how much dsDNA?

A

50 µg/mL (in 1 cm cuvette).

25
Main purpose of PCR?
Amplify specific DNA sequences.
26
What happens during PCR denaturation?
DNA strands separate with heat (~95°C).
27
What happens during PCR annealing?
Primers bind to target DNA sequences.
28
Three components needed for PCR?
Template DNA, primers, DNA polymerase.
29
Effect of low MgCl₂ in PCR?
Reduces or prevents DNA amplification.