cell communication Flashcards
what are the four kinds of cell signalling?
Contact dependent - one signalling cell - membrane-bound signal - one target cell
Synaptic - can be one-to-one cell communication (like contact-dependent), tho over longer distances
Paracrine - local mediator sent out - affecting the closely surrounding cells
Endocrine - wider reaching, hormone released into blood stream travelling all over tho only affecting target cells with the corresponding receptors
(Some signals can travel further - pheromones from queen bees send out signals that control tens of thousands of worker bees)
explain how the notch pathway is an example of contact-dependent signalling
used in development
Seen in drosophila eyes in order to correctly space R8 receptors, there should be 8 in each segment
Notch is the receptor, with its ligand called delta
Neighbouring cells decide which is going to become an R8 receptor and which aren’t using notch signalling
The one that is going to be an R8 cell uses contact dependent signalling and expresses the delta ligand, preventing neighbouring cells (expressing the notch receptor) from developing into R8 receptors to ensure the desired even distribution. known as lateral inhibition
two common ways cells respond to signalling?
often some change in gene expression
or maybe a change in cytoskeleton e.g. to move (macrophages)
explain how hedgehog signalling and DPP signalling are examples of paracrine signalling
does a signal always result in the same response?
NO
a response can be dependant on the dose, there is often a max response level
can be concentration dependent
different depending on the receptor
how are morphogens an example of quantitative responses to a signal?
in high concentrations, morphogens result in a certain cell type forming, and different cell type at lower concentrations
Bicoid for example, is found in drosophila embryos in a gradient to ensure the front of the fly develops as the front
rank three common kinds of response to a signal in order of which is quickest (include an example)
Alter structure of protein like an ion channel - causing it to open (super quick)
Post translational modification - e.g. phosphorylation (pretty quick)
Change protein levels by affecting gene expression (slow) - for example yeast cells being put in galactose rather than glucose and having to produce different enzymes as a result
polycythaemia - how is this an example of signalling gone wrong?
it is a myeloproliferative neoplasm (blood disorder with overproduction of one of the blood cells)
a single A.a change in the JAK2 protein - which normally regulates red blood cell production - results in permanently ‘on’ JAK2 and therefore way to many red blood cells
how is chronic myeloid leukaemia an example of signalling gone wrong?
Treatment?
gene mutation (translocation) BCR gene fuses with Abl (from Chr 9 and Chr 22).
Abl encodes a tyrosine kinase, and here its promoter region is affected to be constantly on (treated by imatinib an Abl tyrosine kinase inhibitor)
from fucking flies again, give an example of positive feedback
notch pathway???
fast responses to a signal require rapid turnover of the effector. how do we make this efficient?
instead of:
making a load of protein when you want the signal, then destroying all that protein to turn off the signal, then making it again when you need the signal etc…
the body uses processes like phosphorylation to “turn on” proteins and later turn them off without destroying and remaking them, similarly G coupled protein receptors exchanging GDP for GTP when activated, and hydrolysing back to GDP when no longer in use
using monomeric GTPases (not GPCRs) is efficient. how do they work?
This is a protein that requires a GTP to be bound to it in order to be active, and shows how proteins just need to be modified in some way to turn off and on, it is used in many processes, including translation
A GEF - GTP exchange factor - is needed to help our monomeric GTPase get rid of that GDP and replace it with another GTP, to become ACTIVE
Once it’s done its thing it needs to go back to inactive
GAP, a GTPase activating protein, is needed to help our monomeric GTPase hydrolyse its GTP back to GDP (its intrinsic GTPase activity is low). Now the GTP is once again inactive
give an example of how we target these processes with drugs when they go wrong
CML - tyrosine kinase constantly on
use imatinib, a tyrosine kinase inhibitor
polycaethemia - ruxolitinib inhibits the tyrosine kinase JAK2
martin’s medicine - what is bisoprolol?
selective B1 adrenergic receptor inhibitor, used to treat certain heart conditions
fun fact - it can cross the BB barrier and cause nightmares!
how does the body simplify signalling (3 ways)?
reduce complexity, for example neurons using the same receptor and signal on different cells for different effects
You only need one type of cell to produce the one hormone, and the target cells can express the same receptor, but each target cell type having different downstream effects - this saves effort
hormones work at very low concentrations
what areas of the brain are key in hormone production?
the hypothalamus and the pituitary gland
why is cholesterol used as a precursor for making hormones?
Hydrophobic lipid tail, hydrophilic -OH group, so can cross membranes, B/B barrier
Many hormones and also vitamins (vitamin D, cortisol, oestrogen, testosterone etc…) need the ability to cross these kinds of barriers
what are the two categories of steroid hormones?
corticosteroids - like cortisol, made in adrenal cortex -
1. Glucocorticoids,
2. mineralocorticoids,
sex steroids - made in gonads/placenta
oestrogens, progestogens, testosterone (androgens)
what domains are there in a nuclear receptor?
N and C terminal domains
Ligand binding domain
Hinge region
DNA binding domain
describe the structure and function of the DNA binding domain of a nuclear hormone receptor?
zinc fingers containing a zinc that interacts with 4 cysteine residues, these are the DNA binding domains, in order to reach into double helix major grooves of DNA
nuclear hormone receptors -what are they like when inactive and how do they become active?
They are essentially hormone dependent nuclear transcription factors
Receptor is either inactive, when the DNA domain at the N terminus end is not working due to bound inhibitory proteins
Ligand binds, causing conformational change that means the zinc finger loses the inhibitory proteins and can then ‘lock in’ the hormone ligand
This ‘locking’ mechanism contributes to high specificity
The hinge region can now bend causing another conformational change, coactivator proteins can join and the DNA binding site is in position to bind to the major groove of DNA etc…
once active, what do nuclear hormone receptors do?
Always first cause production of primary response proteins that will then modulate other genes, either negatively or positively, to form secondary response proteins that will have the additional, desired physiological effects - it is essentially just a cascade
cortisol - what are its therapeutic uses?
when is it released by the body and what does it effect?
as a glucocorticoid it
Can be used as an immunosuppressant and anti inflammatory agent
Widely different effects on different organ systems so not to be used lightly
Released in response to stress and low blood sugar
Affects metabolism, immune system, electrolyte balance and memory
what is the hypothalamic-pituitary-adrenal axis?
Hyp - corticotropin releasing hormone (CRH)
Pituitary then releases adrenocorticotropic hormone (ACTH)
Triggers adrenal gland to make cortisol