Chapter 3// Biological molecules Flashcards

(89 cards)

1
Q

Polar molecule

A

A molecule w regions of negative charge and positive charge

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Solution

A

A liquid (solvent) w dissolved solids,liquids or gases (solutes)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Cohesion 💧

A

A property of water in which water molecules are attracted to each other by hydrogen bonding, allowing the molecules to move together

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Adhesion 💦

A

A property of water in which water molecules are attracted to surfaces such as the walls of cells,vessels or tubes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What 3 types of carbohydrates are there and which one of them is not sweet tasting?

A

Monosaccharides, disaccharides + polysaccharides

Polysaccharides r not sweet to taste

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What type of molecule is a monosaccharide

A

simple sugars : monosaccharides

single, soluble molecule that’s sweet to taste 🍬🍬🍬🍬

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Describe the structure of a monosaccharide

A

Monosaccharides have NO glycosidic bonds and exist as a single ring shape or as a straight chain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Give 3 examples of monosaccharides

A

Hexoses (6C) e.g. Glucose,fructose,galactose 🍎🥭🍑

Pentoses (5C) e.g.
Ribose, Deoxyribose 🧬

Trioses (3C) e.g.
Glyceraldehyde

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What type of molecule is a disaccharide

A

Complex sugars : disaccharide

Are 2 molecules covalently joined which r soluble and sweet to taste 🍰🍰🍰

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Describe the structure of a disaccharide

A

Disaccharides have a single glycosidic bond and there structure is two rings joined

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Give 3 examples of a disaccharide

A

Sucrose 🍬

Maltose 🍭

Lactose🥛

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What type of molecule is a polysaccharide

A

Complex carbohydrates : polysaccharides

Are many molecules covalently joined to each other

Polysaccharides r insoluble + NOT sweet

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Describe the structure of a polysaccharide

A

Polysaccharides have many glycosidic bonds and exist as long chains which may be branched + coiled, making them v compact

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Covalent bond

A

A strong chemical bond formed by sharing one or more e- between two atoms, creating a molecule

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Glycosidic bond

A

A covalent bond formed when two carbohydrate molecules are joined together by a condensation reaction

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Monomer

A

A single small molecule that may combine w other monomers to build up larger molecules called polymers

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Polymer

A

A large molecule built up from many similar monomers joined together by covalent bonds to form a chain or branched chain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Condensation

A

A chemical reaction where 2 molecules r joined together w a covalent bond forming a larger molecule and releasing 1 molecule of water 💧

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Hydrolysis

A

A chemical reaction where the covalent bond between 2 molecules is broken w the addition of a water molecule, separating the 2 molecules

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Give 3 examples of monosaccharides + there function

A

Glucose (6C) = source of energy as easily hydrolysed; transported in the blood of animals

Ribose (5C) = part of all types of RNA + ATP molecules, so it’s an important part of protein synthesis

Deoxyribose (5C) = part of DNA for inherited information

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Explain how hydrogen bonds form between water molecules

A

Oxygen and hydrogen share electrons unequally when they bond.

The oxygen has a slight -ve charge and the hydrogen atoms have a slight +ve charge.

This polarity means water molecules r attracted to each other cuz the slightly +ve pole around the hydrogen atoms bonds to the slightly -ve pole of the oxygen atoms— forming a HYDROGEN BOND

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Explain why water is a polar molecule

A

Because the oxygen draws e- from the hydrogen atoms this results in unequal sharing of electrons in bonds so

The oxygen has a slight -ve charge 💔

And the hydrogen has a slight +ve charge💚

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

What elements make up carbohydrates ?

A

C, H + O

🥖🥞🥔🥐🍞🥯

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

What elements make up lipids?

A

C, H + O

🧀🍳🥑🥥🍮

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
What elements make up proteins?
C, H, O, N + S 🥩🍖🍗🥓🌭
26
What elements make up nucleic acids?
C, H, O, N + Phosphorus
27
Function of glucose (6C) in organisms
Glucose (6C monosaccharide) = source of energy as easily hydrolysed; transported in the blood of animals
28
Function of ribose (5C) in organisms
Ribose (5C monosaccharide) = part of all types of RNA + ATP molecules, so it’s an important part of protein synthesis
29
Function of deoxyribose (5C) in organisms
Deoxyribose (5C monosaccharide) = part of DNA for inherited information
30
Function of maltose in organisms
Maltose (disaccharide) = energy store in plants
31
Function of sucrose in organisms | *bonus if u name monosaccharides it’s made of
Sucrose (disaccharide made of *glucose+ fructose*) | = energy storage in some plants transported in phloem
32
Function of lactose in organisms | *bonus if u name monosaccharides it’s made of
Lactose (disaccharide made of *glucose+ galactose*) | = the sugar found in milk provides nutrients for young mammals 🦙🐈🦘
33
Important features of monosaccharides
Small + soluble
34
Important features of polysaccharides
Large complex molecules which are stable + insoluble
35
Function of starch+ glycogen in organisms
Starch + glycogen (polysaccharides) = energy storage in plants (starch) energy storage in animals (glycogen)
36
Function of cellulose in organisms
Cellulose (polysaccharide) | = structural + v strong so forms main component in plant cell walls
37
Which properties of water make it an important component of the blood
* high specific heat capacity + high latent heat of vaporisation= hard to heat so maintains optimum body temp for reaction * good solvent = important molecules such as glucose can dissolve n be carried in the blood + most biological reactions take place in solution * water is a reactant in loads of important chemical reactions (hydrolysis reactions)
38
Difference between high specific heat capacity vs. High latent heat of vaporisation
High specific heat capacity is the energy required to heat water (raise its temp) = important as water is hard to heat meaning it maintains optimum temp for reactions Whereas High latent heat of vaporisation is the energy required for a substance to change state= important as water acts as a coolant, it takes a lot of energy to change state so e.g. when sweat evaporates it cool skin
39
Give 2 reasons why the high specific heat capacity of water is beneficial to organisms
water doesn’t experience rapid temperature changes which means * it acts as a good stable habitat for organisms to live in * it acts as a coolant in the blood, keeping a constant body temp
40
Meaning of coolant
Used to remove heat from something
41
What is a indirect energy source + give an example
An indirect energy source is one that can be stored n broken down to release energy E.g. GLYCOGEN N.b. Glucose is a DIRECT energy source= used straight away not stored
42
What sugar is present in RNA nucleotides?
RIBOSE (a pentose monosaccharide)
43
What is the difference between ribose n deoxyribose?
Deoxyribose lacks 1 oxygen atom whereas ribose has it
44
What monosaccharides make up the disaccharide maltose
Alpha glucose + alpha glucose Maltose is found in germinating seeds
45
What monosaccharides make up the disaccharide sucrose
Alpha glucose + fructose Sucrose is found in sugar cane
46
What monosaccharides make up the disaccharide lactose
Alpha glucose + beta galactose Lactose is found in milk
47
What is a polysaccharide
Large polymers formed of many monosaccharides held together by glycosidic bonds formed thru condensation reactions
48
What is the difference between amylose and amylopectin
Both are starch molecules however amylose has only 1,4 glycosidic bonds whereas amylopectin has 1,4 and 1,6 glycosidic bonds
49
In amylopectin, how often do 1,6 glycosidic bonds form ?
In amylopectin 1,6 glycosidic bonds form once every 25 glucose subunits
50
Both glycogen and amylopectin are storage molecules, however why is glycogen arguably better?
Glycogen forms more branches than amylopectin, meaning it’s more compact so less space is needed for it to be stored
51
Give 3 similarities between amylopectin and glycogen
* both insoluble * 1,4 + 1,6 glycosidic bonds * both branched * both compact
52
Why is glycogen easily broken down in the body ?
Because glycogen, as a result of branching, has many free ends where glucose molecules can be added or removed = this speeds up storing + releasing glucose molecules required by the cell
53
What glucose is glycogen made of ?
Glycogen is a polymer of alpha glucose molecules
54
What glucose is cellulose made of ?
Cellulose is a polymer of beta glucose molecules
55
How are microfibrils, macrofibrils and fibres formed in a cellulose molecule
H bonds form between the adjacent cellulose chains forming MICROFIBRILS which combine together to form MACROFIBRILS which combine to make FIBRE These fibres r strong 💪 + insoluble which is why cellulose forms the main component of cell walls
56
Describes how beta glucose molecules r joined together in cellulose
Cellulose is made from beta glucose molecules joined together by condensation reactions to form glycosidic bonds. However, alternate beta glucose molecules r inverted cuz otherwise the hydroxyl (-OH) groups r too far apart to react. Because of this cellulose is a straight chain w many -OH groups on the outside
57
How are triglycerides formed?
Triglycerides form from ESTERIFICATION = a condensation reaction between fatty acids + glycerol forming an ester link/bond between each molecule and 3 molecules of water (one molecule for each ester link)
58
What’s the difference between a saturated vs. unsaturated fat
Saturated fats have NO C=C DOUBLE BONDS Whereas unsaturated fats have one or more C=C DOUBLE BONDS ( the presence of double bonds causes the molecule to kink/bend meaning they can’t pack closely together so they’re usually oils not fats)
59
What is a monounsaturated fat
A unsaturated fat with only one double bond between carbon atoms
60
What is a polyunsaturated fat
A unsaturated fat w more than one double bond between carbon atoms
61
What are phospholipids
They’re modified triglycerides which contain phosphorus along w C,H + O one of the fatty acids in a triglyceride is replaced w a PHOSPHATE (phosphate ions r -ve so dissolve in water) this phosphate joins w the glycerol creating a HYDROPHILLIC END (charged heads) the remaining 2 fatty acids form the HYDROPHOBIC ENDS (non-polar tails)
62
What are sterols?
Steroid alcohols = a type of lipid 4C ring structure HYDROPHILLIC hydroxyl (-OH) group = polar end which dissolves in water Rest of molecule hydrophobic
63
Where is cholesterol manufactured in the body?
Cholesterol is manufactured in the liver + intestines
64
What is cholesterol and name 4 of its functions
Cholesterol is a sterol= a lipid 4C ring structure steroid alcohol w a -OH HYDROPHILLIC group Important role in: 🧀producing vitamin D 🧀producing steroid hormones 🧀producing bile 🧀providing STABILITY TO CELL MEMBRANES
65
Name roles of lipids due to their non-polar nature
* membrane formation + creation of hydrophobic barriers * hormone production * electrical insulation necessary for impulse transmission * waterproofing e.g. birds feathers + plant leaves
66
Lipids, esp. triglycerides play an important role in long-term energy storage which provides :
* thermal insulation to reduce heat loss e.g. in penguins * cushioning to protect vital organs such as heart + kidneys * buoyancy for aquatic animals like whales
67
How does one test for lipids?
EMULSION TEST = mix lipid sample w an organic solvent e.g. ethanol, next add water and shake. If a white emulsion forms a layer on top it indicates the presence of a lipid If it remains clear = test negative
68
R group (residual group)
A side chain that acts as a functional group as it helps to determine the internal bonds + the shape/function of the polypeptide
69
Peptide bond
A covalent bond that forms when 2 amino acids r joined by a condensation reaction w the loss of 1 water molecule 💧
70
How can a peptide bond be broken?
A peptide bond can be broken by a HYDROLYSIS reaction 💦
71
Polypeptide
A polymer of amino acids each joined to the other by a peptide bond
72
Dipeptide
2 amino acids held together by a peptide bond
73
Amino acids all have the same general structure, what is it?
* a carboxyl group (-COOH) * an amino group (-NH2) __ all attached to a carbon atom__ + an R group (residual/variable group) which is unique to each individual amino acid
74
What is the smallest amino acid + what is it’s r group?
Glycine It’s r group is a hydrogen atom
75
All amino acids contain the elements _ _ _ _ and some contain _
All amino acids contain the elements Carbon, oxygen, hydrogen + nitrogen + some contain SULFUR
76
Explain what is involved in the primary structure of a protein 🔴
🔴 The primary structure is the sequence in which the amino acids r joined= •only involves PEPTIDE BONDS• >this sequence influences how the polypeptide folds to give its final shape
77
Explain what is involved in the secondary structure of a protein 🔵
🔵 In the secondary structure polypeptide chain don’t remain flat, they coil= •as a result of HYDROGEN BONDING• >where/how the H bonds form depends on the amino acid sequence of the protein Either ALPHA HELIX Or BETA PLEATED SHEETS
78
In secondary structure how do the H bonds form in an alpha helix
In alpha helix the H bonds form between amino acids in one part of the chain to those a little further down the chain
79
In secondary structure how do the H bonds form in beta pleated sheets
In beta pleated sheets the H bonds connect to the adjacent pleated sheet
80
Explain what is involved in the tertiary structure of a protein 🌕
🌕 In the tertiary structure folding of the protein into its final shape occurs thru interactions between R groups These interactions include: ⚠️hydrogen bonds= these r the weakest of the bonds formed ⚠️ hydrophobic/hydrophillic interactions= weak interactions between polar + non-polar R groups ⚠️ionic bonds= these r stronger than H bonds n form between oppositely charged R groups ⚠️disulfide bonds= covalent + the strongest bonds, only form between R groups that contain sulfur atoms
81
Not all proteins have QUATERNARY STRUCTURE, but which ones do ?
Proteins that r made of more than one polypeptide chain have QUATERNARY STRUCTURE
82
Conjugated proteins
Conjugated proteins r GLOBULAR proteins which contain a non-protein component called a PROSTHETIC group
83
What are proteins without prosthetic groups called
Proteins without prosthetic groups r called SIMPLE PROTEINS
84
Give an example of a prosthetic group
HAEM prosthetic group found in the conjugated protein haemoglobin
85
What happens to the RNA molecules after protein synthesis?
After protein synthesis the RNA molecules are degraded in the cytoplasm The phosphodiester bonds r hydrolysed + the RNA nucleotides r released and reused
86
Properties of ATP
* small= moves easily into + out of cells * water soluble = energy requiring processes happen in aqueous environments * releases energy in small quantities * easily regenerated = can be recharged w energy
87
What is meant by the phrase ‘ATP contains bonds between phosphates w intermediate energy’
Bonds w intermediate energy between phosphates means the energy is large enough to be useful for cellular reactions but not so large that energy is wasted as heat
88
What enzyme catalyses the formation of peptide bonds (found in ribosomes)
Peptidyl transferase
89
What is the difference between ATP and DNA
In ATP the base is always adenine and it has 3 phosphate groups instead of one