Chapter 3: Protein Structure and Function Flashcards
peptide
compound consisting of two or more amino acids linked in a chain
a-helix (alpha-helix)
protein secondary structure in which the polypeptide backbone coils into a spiral shape stabilized by hydrogen bonding
polymer
any long molecule composed of small repeating units (monomers) bonded togehter
condensation reaction
chemical react. in which two molecules are joined covalently with the removal of an OH- from one and an -H from another to form water
tertiary structure
overall three dimensional shape of a single polypeptide chain
monomer
small molecule that can covalently bind to other similar molecules to form a larger macromolecule
dehydration reaction
condensation reaction
secondary structure
localized folding of a polypeptide chain into regular structures stabilized by hydrogen bonding between atoms of the peptide backbone
polypeptide
chain of 50 or more amino acids linked together by peptide bonds
beta-pleated sheet
protein secondary structure in which the polypeptide backbond folds into a sheetlike shape stabilized by hydrogen bond
protein
macromolecule consisting of one or more polypeptide chains
peptide bond
covalent bond formed by a condensation react. between two amino acides
primary structure
sequence of amino acid residues in a peptide or protein; also the sequence of nucleotides in a nucleic acid
polymerization
process by which many identical/similar small molecules (monomers) are covalently bonded to form a large molecule (polymer)
macromolecule
vary large organic molecule, usually made up of smaller molecules (monomers) joined together into a polymer
disulfide bond
covalent bond between two sulfur atoms, typically in the side chains of certain amino acids
oligopeptide
chain composed of fewer than 50 amino acids linked together by peptide bonds
van der Waals interactions
weak electrical attraction between two nonpolar molecules that have been brought together through hydrophobic interactions
macromolecular machine
group of proteins that assemble to carry out a particular function
hydrolysis
chemical react. in which a molecule is split into smaller molecules by reacting with water. most hydrolysis react. involve splitting of polymers into monomers
quaternary structure
overall 3D shape formed from two or more polypeptide chains; determined by the number, relative positions, and interactions of the subunites
enzyme
protein catalyst used by living organisms to speed up and control biological reactions