Chapter 6/8 Flashcards
(21 cards)
Oxidoreductases
Transfer of electrons
Transferases
Transfers functional groups between molecules
Hydrolases
Cleaves a molecule by addition of water
Lyases
Adds or removes atoms of functional groups to form a double bond
Isomerases
Moves functional groups within a molecule
Ligases
Joins 2 molecules through ATP hydrolysis
Apoenzyme
An enzyme without a cofactor
Holoenzyme
A catalytically active enzyme
Cofactors
Small molecules required by many enzymes for catalytic activity
Coenzyme
Type of Cofactor: small organic molecules, derived from vitamins
Metals
Type of Cofactor
Prosthetic groups
Tightly bound coenzyme
Cosubstrates
Loosely bound coenzymes, bind to the enzyme and are released from it
Chymotrypsin Mechanism step 1
Substrate binds
Chymotrypsin Mechanism step 2
Oxygen of side chain of serine makes nucleophilic attack on carbonyl carbon of target peptide bond
Chymotrypsin Mechanism step 3
Tetrahedral intermediate collapses to generate acyl enzyme
Chymotrypsin Mechanism step 4
Release of amine component (Proton from positive charged His residue goes to amino group of substrate; Also first stage of hydrolytic rxn: Acylation of enzyme)
Chymotrypsin Mechanism step 5
Water molecule takes place of amine component that was just released
Chymotrypsin Mechanism step 6
OH- ion attacks carbonyl carbon atom of acyl group forming tetrahedral intermediate
Chymotrypsin Mechanism step 7
tetrahedral intermediate collapses forming COOH product
Chymotrypsin Mechanism step 8
COOH component released