Classification & evolution Flashcards

1
Q

what is taxonomy

A

the practice of biological classification

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2
Q

what sit eh hierarchal classifiaiton system

A

used to organise and group similar organisms together so that they can be more easily understood

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3
Q

what si the orde ro fthe hierarchal system

diking kind pu$$y causes only good sex

A

Domain
Kingdom
Phylum
Class
Order
Genus
Species

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4
Q

what are the 3 domains

A

Archea
bacteria
Eukarya

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5
Q

what are the 5 kingdoms

A

animal
plant
prokaryotes
fungi
protoctists

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6
Q

what is natural classificaiton

A

most widely used in biology
* Based on the evolutionary relationships
between organisms — how closely related
they are
(this is called PHYLOGENY)
* uses homologous characteristics
* based on shared features or genes
derived from a common ancestor

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7
Q

what is artificiail classification

A
  • according to differences that are
    useful at the time
    (e.g. colour
    habitat).
    Size’
  • Often uses analogous features
    (same function but not same
    evolutionary origin)
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8
Q

whta is a binomial naming sysetm

A

the scientific names given to individuals species
consist of the organism’s genus and species name in modern Latin
allow for species to be universally identified
established by the Swedish scientist Carl Linnaeus in the 18th Century
always italicized in writing

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9
Q

wht are archae

A

extremophile prokaryotes, first discovered living in extreme environments
have no nucleus
Unique lipids being found in the membranes of their cells
No peptidoglycan in their cell walls
Ribosomal structure (particularly that of the small subunit) are more similar to the eukaryotic ribosome than that of the bacteria
similar size range as bacteria
DNA transcription is more similar to that of eukaryotes

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10
Q

what are bacteria

A

have prokaryotic cells which contain no nucleus
vary in size over a wide range
divide by binary fission

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11
Q

what are eukarya

A

have eukaryotic cells with nuclei and membrane-bound organelles
vary massively in size
cells divide by mitosis
can reproduce sexually or asexually

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12
Q

key difference between archaea & bacteria

A

Membrane lipids:
- membrane lipids of Archaea consist of branched hydrocarbon chains bonded to glycerol by ether linkages
- membrane lipids of Bacteria consist of unbranched hydrocarbon chains bonded to glycerol by ester linkages
Ribosomal RNA:
- both have 70s ribosomes
- ribosomes in Archaea possess a smaller subunit that is more similar to the subunit found in Eukaryotic ribosomes
- base sequences of ribosomal RNA in Archaea show more similarity to the rRNA of Eukarya than Bacteria
- The primary structure of ribosome proteins in Archaea show more similarity to the ribosome proteins in Eukarya than Bacteria

Cell wall composition:
- Bacteria domain have cells that always possess cell walls with peptidoglycan
- Archaea domain also have cells that always possess cell walls, however these do not contain peptidoglycan

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13
Q

what are prokaryota

A
  • includes bacteria and blue-green bacteria
  • Most are unicellular
  • cells have cell walls (not made of cellulose) and cytoplasm but no nucleus or mitochondria
  • vary in size over a wide range
  • cells divide by binary fission
  • Blue-green bacteria and some bacteria are autotrophic (they are photosynthetic)
  • Many bacteria are heterotrophic (feeding by decomposing living or dead organic materials)
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14
Q

what are protcitsta

A
  • eukaryotic, and this broad group of cellular life encompasses all eukaryotic cells that do not belong to the other three eukaryotic kingdoms
  • how great diversity in all aspects of life including structure, life cycle, feeding and trophic levels and well as modes of locomotion
  • Protoctists can exist as single-celled organisms or as a group of similar cells
  • some have no cell wall
  • some have cellulose cell walls and chloroplasts
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15
Q

what are fungi

A
  • eukaryotic cells
  • Possess non-cellulose cell walls (often made of the polysaccharide chitin)
  • Don’t have cilia
  • fungi are heterotrophs - use organic compounds made by other organisms as their source of energy and molecules for metabolism, obtain this energy and carbon by digesting dead/decaying matter extracellularly or from being parasites on living organisms
  • reproduce using spores
  • can be unicellular
  • Some consist of long threads called hyphae that grow from the main fungus body and form a network of filaments called the mycelium
  • Larger fungi possess fruiting bodies that release large numbers of spores
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15
Q

what are plants

A

-multicellular eukaryotic organisms
- All have cell walls composed of cellulose
- possess large permanent vacuoles
- able to differentiate into specialized cells to form tissues and organs
- Possess chloroplasts that enable photosynthesis
- sometimes have flagella
- autotrophs - can synthesize their organic compounds and molecules for energy use and building biomass from inorganic compounds
- have complex body forms, roots, stem etc

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16
Q

what are animali

A
  • multicellular eukaryotic organisms
  • ble to differentiate into many different specialised cell types that can form tissues and organs
  • Have small temporary vacuoles (for example, lysosomes)
  • Have no cell walls
  • Sometimes have cilia
  • heterotrophs and have a wide range of feeding mechanisms
  • Communication within their complex body forms takes place through a nervous system and chemical signalling
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17
Q

what is phylogeny

A

The evolutionary history of organisms
- Classifying organisms according to their phylogeny means that species that share a more recent common ancestor are classified together, while species with a more distant common ancestor are classified in separate groups

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18
Q

what were darwins observtaions

A

All organisms produce more offspring than could ever actually survive (i.e. not all offspring survive)

Populations of organisms do fluctuate (change over time) but not significantly (i.e. their numbers usually stay fairly constant)

Populations of the same species of organisms show variation in characteristics between individuals (known as intraspecific variation)

Offspring inherit characteristics from their parents

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19
Q

two main pieces of eidence for evolution

A
  • Fossil evidence
  • Molecular evidence
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20
Q

what is evolution

A

the gradual change in the inherited characteristics of a population over time through natural selection
- darwin and wallace

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21
Q

how can fossils be used as evidence for evolution

A

We can tell from fossils that environments (and the organisms living in these environments) have changed significantly over millions of years

Fossils, as well as the rocks they are found in, can be dated, allowing us to accurately put fossil organisms into a sequence from oldest to youngest (i.e to see how the organisms changed through evolutionary time)

Fossils also allow us to show similarities between extinct species (i.e. how related they are) and even between now-extinct, ancestral species and present-day species

All this has provided evidence for the gradual change from simple life forms, such as Archaea and Bacteria, to complex Eukaryotic life forms and the evolutionary relationships between organis

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22
Q

molecular evidence for evolution

A

DNA found in the nucleus of cells can be sequenced and used to provide evidence of evolutionary relationships between species and how the genetic code of species has changed as they have evolved

The differences between the nucleotide sequences in the analogous genes of different species can provide a lot of information:

The more similar the sequence the more closely related the species are

Two groups of organisms with very similar DNA will have separated into separate species more recently than two groups with less similarity in their DNA sequences

As a result, DNA sequence analysis and comparison can be used to create phylogenetic trees that show the evolutionary relationships between species

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22
Q

what is adaptation

A

A characteristics that aids an organism’s survival in its environment
- anatomical
- behavioural
- phsyciological

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23
what is anatomical adaptations
Physical features of an organism
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what is behavioural adaptations
The way an organism behaves in response to their environment learnt or inherited eg. migration herding
25
what is physiological adaptations
Biological processes within an organism process of productin of something - eg. pigmebt, enzymes, vasocnstriction, sweating, reproductive cycles
26
what is convergent evolution
Convergent evolution occurs by natural selection as follows: two species live in different parts of the world with similar environments the species deal with the same selection pressures the same characteristics are advantageous in the two environments, so individuals with these characteristics are more likely to survive and reproduce over time the advantageous characteristics become widespread in both populations
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what was darwins and wallace theory Of evolution by natural selection:
Observation 1 : Organisms produce more offspring than are needed to replace parents Observation Populations tend to remain stable in size over time Deduction 1: There is competition for survival Observation 3: There is variation among the individuals of a given species Deduction 2: The best adapted variants will be selected for by the natural conditions operating at the time. The best variants have a selective advantage. Survival Of the fittest occurs
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what is the modern thery of evolution through variation
- variation caused by random mutation, produces a new allele - survival of the fittest - advantages allele is passed on - after many generations there is a shift in the population
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what is genetic varitaition
differences in DNA base sequences between individual organisms within a species population transferred from one generation to the next and results in genetic diversity within a species
28
what causes natural selection
Random mutation can produce new alleles of a gene Many mutations are harmful or neutral but, under certain environmental conditions, the new alleles may benefit their possessor, leading to an increased chance of survival and increased reproductive success The advantageous allele is passed onto the next generation As a result, over several generations, the new allele will increase in frequency in the population
29
wht are the differnr type of natural selection
- directional selection - reduction in variation of range while favouring variants of one end - Stabilising selection - favours the most common phenotype as the best adapted. Selection removes the extremes at either end of the range. - disruptive selection - Occurs when environmental conditions are varied or when the environmental range Of an organism is large.
29
hwo do bacteri abecome resistsant to anti-biotics
- variation caused by mutations - chance mutation might cause some bacteria to become resistant to an antibioti - When the population is treated with this antibiotic, the resistant bacteria do not die - resistant bacteria can continue to reproduce with less competition from the non-resistant bacteria - therefore the genes for antibiotic resistance are passed on with a much greater frequency to the next generation - Over time, the whole population of bacteria becomes antibiotic-resistant because the antibiotic-resistant bacteria are best suited to their environment -
29
what is verticla transmission
Bacteria reproduce asexually by binary fission (the DNA of the bacterial chromosome is replicated and the bacterial cell divides in two, with each daughter cell receiving a copy of the chromosome) Bacteria reproduce like this very rapidly (on average, every 20 minutes) If one bacterium contains a mutant gene that gives it antibiotic resistance, all of its descendants (millions of which can be produced in a matter of hours) will also have the antibiotic resistance This form of transmission enables antibiotic resistance to spread within a bacterial population
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what is horizontal transmition
Plasmids (the small rings of DNA present in bacterial cells) often contain antibiotic-resistant genes These plasmids are frequently transferred between bacteria (even from one species to another) This occurs during conjugation (when a thin tube forms between two bacteria to allow the exchange of DNA) – DNA from the bacterial chromosome can also be transferred in this way In this way, a bacterium containing a mutant gene that gives it antibiotic resistance could pass this gene on to other bacteria (even those from a different species). This is how ‘superbugs’ with multiple resistance have developed (e.g. methicillin-resistant Staphylococcus aureus – MRSA) This form of transmission enables antibiotic resistance to spread within or between bacterial populations
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what is standard deviatin
measures the spread of data around the mean value
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what is a t- test
- always give a null hypothesis - calculate mean for eahc data set - calculate tandard deviation for each data sheet - use standard deviaiton to cacluate t-test - calcuate degree of freedom (n1-1)+(n2-1) - write conclusion which should include: A reference to the t value, the critical value, the degrees of freedom and the probability level Whether or not there is a significant difference between the means of the two data sets Whether the null hypothesis is accepted or rejected - is calculated value less than qcriticla value null ypothesis accepted
32
what is interspecific variaiton
- that which exists between individuals of different species - can be useful for classifying organisms into species groups
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what is intraspecific variaiton
- that which exists between individuals of the same species - These differences are smaller than those found between individuals of different species - Variation within a species allows natural selection to occur
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what is discontinous variation
refers to differences that fall into discrete and distinguishable categories with no intermediates can be represented using a bar chart with bars that are clearly distinct from each other
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what is continous variation
efers to differences that show a range of values and can fall anywhere between two extremes can be represented on a histogram with bars that touch each other, and will often show a characteristic bell-shaped curve
35
whta re the cause of variaiton
- genetic - enviornmental - combination
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causes of discontinous variaiton
- occurs solely due to genetic factors, environment has no effect, Phenotype = genotype - Different genes have different effects on the phenotype - Different alleles at a single gene locus have a large effect on the phenotype
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Causes of continuous variation
caused by an interaction between genetics and the environment, Phenotype = genotype + environment Different alleles at a single locus have a small effect on the phenotype Different genes can have the same effect on the phenotype and these add together to have an additive effect If a large number of genes have a combined effect on the phenotype they are known as polygenes
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what is a species
- a group of individuals that can reproduce to produce viable/fertile offspring
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what is specificaiton
the process of which 2 new species form from a common ancestor
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describe speciation
- single population of species - population is split and seperates so cant interact - each side subejcted to different seelction pressures - evolution by natural selection chang over many grrntations - if they meet they cna no longer breed
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what is allopatric speciation
- physical seperation eg. River, road, lava, sea
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what is sympatric speciation
Sympatric speciation takes place with no geographical barrier A group of the same species could be living in the same place but in order for speciation to take place there must exist two populations within that group and no gene flow occurs between them Something has to happen that splits or separates the two populations: This can occur via: Ecological separation Behavioural separation Ecological separation: Populations are separated because they live in different environments within the same area For example, soil pH can differ greatly in different areas. Soil pH has a major effect on plant growth and flowering, so a population growing in soil with a slightly different pH may flower at a different time from another population, leading to reproductive separation (and eventually genetic isolation) of the two populations Behavioural separation: Populations are separated because they have different behaviours For example differences in feeding, communication or social behaviours, such as courting behaviours to attract a matehappens at the same time in the same place eg: - ecolgical or behavioural isolation - temporal or seasonal isolation - behavioural isolation - mechanical isolation - soeciaiton by polyploidy, have extra chromosomes
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what is genetic drift
he random changes in allele frequencies within a population's gene pool, due to chance events. Genetic drift does not occur as a result of natural selection. It is particularly influential in small, isolated populations, where it can accelerate the development of new species.random changes in allele frequencey taht occur in all populations decreases th egeentic variation in a species
40
what is a population bottelneck
occurs when a population's size reduces suddenly and drastically and this reduction lasts for at least one generation. - leads to a reduced gene pool and decreased genetic diversity compared to the original population. The decreased genetic diversity can cause issues related to inbreeding and reduced fertility. However, it may also allow a beneficial mutation to become more prevalent.
41
whats the founder effect
occurs when a small group splits from a larger population, and a small new population is established by this small number of individuals. leads to a reduced gene pool and decreased genetic diversity compared to the original population. Rare alleles from the original population may become more common in the new population, whether they are beneficial, harmful, or neutral (an extreme example of genetic drift).
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what is artificial selection
the process by which humans choose organisms with desirable traits and selectively breed them together to enhance the expression of these desirable traits over time and over many generations
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process of artificial selection via selective breeding
he population shows phenotypic variation - there are individuals with different phenotypes (i.e. different characteristics) A breeder (the person carrying out the artificial selection) selects an individual with the desired phenotype Another individual with the desired phenotype is selected. The two selected individuals should not be closely related to each other The two selected individuals are bred together The offspring produced reach maturity and are then tested for the desirable trait. Those that display the desired phenotype to the greatest degree are selected for further breeding The process continues for many generations: the best individuals from the offspring are chosen for breeding until all offspring display the desirable trait
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Ethical Considerations Surrounding Artificial Selection
Selective breeding can lead to ‘inbreeding’ This occurs when only the ‘best’ animals or plants (which are closely related to each other) are bred together This results in a reduction in the gene pool – this is a reduction in the number of alleles (different versions of genes) in a population This is known as inbreeding depression As inbreeding limits the size of the gene pool, there is an increased chance of: Organisms inheriting harmful genetic defects (as there is a higher chance of harmful recessive alleles combining in an individual and being expressed in the phenotype) Organisms being vulnerable to new diseases (as there is less chance of resistant alleles being present in the reduced gene pool) This means that some intensive artificial selection processes have resulted in conditions and diseases that are extremely damaging or deleterious for the animals involved, which is ethically questionable
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importance of maintaining a resource of genetic material for use in selective breeding
In artificial selection, it is important to maintain a resource of genetic material that includes types that are close to the original wild type (of the organism you are selectively breeding) This is important as it ensures that the gene pool for a particular species doesn't become too small (which can weaken the population by reducing variation) An example of the importance of this can be seen in the artificial selection of maize Maize (also known as corn) is a staple crop in many countries around the world and is grown to feed both livestock and people Different hybrids of maize are constantly being created and tested for desirables traits such as resistance to pests/disease, higher yields and good growth in poor conditions In the past, maize plants have been heavily inbred (bred with plants with similar genotypes to their own) This has resulted in small and weaker maize plants that have less vigour This is due to inbreeding depression, which: Increases the chance of harmful recessive alleles combining in an individual and being expressed in the phenotype Leads to decreased growth and survivability A farmer can prevent inbreeding depression by outbreeding with wild type varieties of maize This involves breeding individuals that are not closely related Outbreeding produces taller and healthier maize plants It decreases the chance of harmful recessive alleles combining in an individual and being expressed in the phenotype and leads to increased growth and survivability (known as hybrid vigour) Crops of these plants have a greater yield
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