Clinical Microbiology Flashcards

(56 cards)

1
Q

What are the main actions of antibiotics?

A
  1. Inhibit cell wall formation
  2. Inhibit protein synthesis
  3. Inhibit DNA synthesis
  4. Inhibit RNA synthesis
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Give some examples of antibiotics that inhibit cell wall formation?

A

penicillin
cephalosporins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Give some examples of antibiotics that inhibit protein synthesis?

A

aminoglycosides (cause misreading of mRNA)
chloramphenicol
macrolides (e.g. erythromycin)
tetracyclines
fusidic acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Give some examples of antibiotics that inhibit DNA synthesis?

A

quinolones (e.g. ciprofloxacin)
metronidazole
sulphonamides
trimethoprim

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Give some examples of antibiotics that inhibit RNA synthesis?

A

rifampicin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Features of campylobacter jejuni?

A

-Most common cause of acute infective diarrhoea
-Spiral, gram negative rods
-Usually infects caecum and terminal ileum.
-Local lymphadenopathy is common
-May mimic appendicitis as it has marked right iliac fossa pain
-Reactive arthritis is seen in 1-2% of cases

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Features of shigella spp.?

A

-Members of the enterobacteriaceae
-Gram negative bacillii
-Clinically causes dysentery
-Shigella soneii is the commonest infective organism (mild illness)
-Usually self limiting, ciprofloxacin may be required if individual is in a high risk group

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Features of salmonella?

A

-Facultatively anaerobic, gram negative, enterobacteriaceae
-Infective dose varies according to subtype

Salmonellosis: usually transmitted by infected meat (especially poultry) and eggs

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Features of E.coli?

A

MAIN TYPES:

-Enteropathogenic
-Enteroinvasive: dysentery, large bowel necrosis/ulcers
-Enterotoxigenic: small intestine, travelers diarrhoea
-Enterohaemorrhagic: 0157, cause a haemorrhagic colitis, haemolytic uraemic syndrome and thrombotic thrombocytopaenic purpura

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Features of yersinia enterocolitica?

A

-Gram negative, coccobacilli
-Typically produces a protracted terminal ileitis that may mimic Crohns disease
-Differential diagnosis acute appendicitis
-May progress to septicaemia in susceptible individuals
-Usually sensitive to quinolone or tetracycline

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What are the features of vibrio cholera?

A

-Short, gram negative rods
-Transmitted by contaminated water, seafood
-Symptoms include sudden onset of effortless vomiting and profuse watery diarrhoea
-Correction of fluid and electrolyte losses are the mainstay of treatment
-Most cases will resolve, antibiotics are not generally indicated

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what are typhoid and paratyphoid caused by?

A

Salmonella typhi and Salmonella paratyphi (types A, B & C) respectively

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Symptoms of typhoid/paratyphoid?

A
  • initially systemic upset
  • relative bradycardia
  • abdominal pain, distension
    constipation: although
    Salmonella is a recognised cause of diarrhoea, constipation is more common in typhoid
  • rose spots: present on the trunk in 40% of patients, and are more common in paratyphoid
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Complications of typhoid/paratyphoid?

A
  • osteomyelitis (especially in sickle cell disease where Salmonella is one of the most common pathogens)
  • GI bleed/perforation
  • meningitis
  • cholecystitis
  • chronic carriage (1%, more likely if adult females)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is Streptococcus bovis septicaemia associated with?

A

carcinoma of the colon
(also endocarditis)

gram +VE

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Features of S.Aureus?

A

Facultative anaerobe
Gram positive coccus
Haemolysis on blood agar plates
Catalase positive

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What can S.Aureus cause?

A

cutaneous infections
abscesses
Exo and entero toxin may result in toxic shock syndrome and gastroenteritis respectively

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Ideal treatment of S.Aureus?

A

penicillins although many strains now resistant

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Features of S.pyogenes?

A

Gram positive, forms chain like colonies, Lancefield Group A Streptococcus
Produces beta haemolysis on blood agar plates
Rarely part of normal skin microflora
Catalase negative

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Treatment of S.Pyogenes?

A

penicillin, macrolides may be used as an alternative

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

What does S.pyogenes release?

A

proteins/ virulence factors: hyaluronidase, streptokinase which allow rapid tissue destruction

Superantigens such as pyogenic exotoxin A which results in scarlet fever

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

What does H.pylori release?

A

urease that breaks down gastric urea> Carbon dioxide and ammonia> ammonium>bicarbonate

Produces hydrogenase that can derive energy from hydrogen released by intestinal bacteria

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

what does Hlpylori colonise?

A

usually gastric antrum

Irritates resulting in increased gastrin release and higher levels of gastric acid

24
Q

Is Hpylori gram positive or negative?

A

Gram negative, helix shaped rod, microaerophillic

25
Risks of H.Pylori?
10-20% risk of peptic ulcer, 1-2% risk gastric cancer, <1% risk MALT lymphoma.
26
Diagnosis of H.pylori?
serology (approx. 75% sensitive). Biopsy urease test during endoscopy probably the most sensitive
27
Features of staphylococcus epidermis?
tends to colonise plastic devices and forms a biofilm (difficult to eradicate without removal of device e.g. breast implant)
28
what is malignant otitis external cause by?
Pseudomonas aeruginosa
29
Key features of malignant otitis external?
Diabetes (90%) or immunosuppression (illness or treatment related) Severe, unrelenting, deep-seated otalgia Temporal headaches Purulent otorrhea Possibly dysphagia, hoarseness, and/or facial nerve dysfunction
30
What can malignant otitis external progress to?
Progresses to temporal bone osteomyelitis
31
Treatment of malignant otitis externa?
Anti pseudomonal antimicrobial agents Topical agents Hyperbaric oxygen is sometimes used in refractory cases
32
Main causes fo lactational mastitis?
S.Aureus
33
Which pathogen is associated with gangrene?
C.perfringes
34
WHO definitions of diarrhoea?
Diarrhoea: > 3 loose or watery stool per day Acute diarrhoea < 14 days Chronic diarrhoea > 14 days
35
Common causes of osteomyelitis (pathogens)?
S aureus and occasionally Enterobacter or Streptococcus species In sickle cell: Salmonella species
36
what sort of virus is hepatitis B?
double-stranded DNA virus
37
Complications of hepatitis B infection?
Chronic hepatitis (5-10%) Fulminant liver failure (1%) Hepatocellular carcinoma Glomerulonephritis Polyarteritis nodosa Cryoglobulinaemia
38
Treatment of hepatitis B infection?
Pegylated interferon-alpha lamivudine, tenofovir and entecavir
39
How are patients screened for MRSA?
nasal swab and skin lesions or wounds the swab should be wiped around the inside rim of a patient's nose for 5 seconds the microbiology form must be labelled 'MRSA screen'
40
Suppression of MRSA once carrier identified?
nose: mupirocin 2% in white soft paraffin, tds for 5 days skin: chlorhexidine gluconate, od for 5 days. Apply all over but particularly to the axilla, groin and perineum
41
Common cause of bladder calcification?
Schistosoma haematobium causes haematuria Schistosomiasis is the most common cause of bladder calcification worldwide.
42
Management of schistosomiasis?
Single oral dose of praziquantel
43
what is the most common pathogen implicated in cholangitis?
E.coli [Klebsiella species Enterococcus species Streptococcus species ]
44
Clinical features of cholangiitis?
Charcot's triad: Fever (90% cases) Right upper quadrant pain Jaundice Reynolds pentad: Above plus confusion and hypotension
45
Management of cholangitis:?
ERCP -usually after 72 hours of antibiotics Percutaneous transhepatic cholangiogram and biliary drain
46
Features of enterobiasis?
Due to organism Enterobius vermicularis Common cause of pruritus ani Diagnosis usually made by placing scotch tape at the anus, this will trap eggs that can then be viewed microscopically Treatment is with mebendazole
47
What is Ancylostoma duodenale?
- Hookworms that anchor in proximal small bowel - Most infections are asymptomatic although may cause iron deficiency anaemia - Larvae may be found in stools left at ambient temperature, otherwise infection is difficult to diagnose - Infection occurs as a result of cutaneous penetration, migrates to lungs, coughed up and then swallowed -Treatment is with mebendazole
48
What is Ascariasis?
- Due to infection with roundworm Ascaris lumbricoides - Infections begin in gut following ingestion, then penetrate duodenal wall to migrate to lungs, coughed up and swallowed, cycle begins again - Diagnosis is made by identification of worm or eggs within faeces - Treatment is with mebendazole
49
When is bacteroides fragilis found?
severe peritoneal infections and as it is facultatively anaerobic may be present in pus. It has a pungent aroma.
50
Risk factors for c.diff?
Broad spectrum antibiotics Use of proton pump inhibitors Contacted with persons infected with c.difficile
51
Management of c.diff?
Consider stopping proton pump inhibitor treatment First-line therapy is now oral vancomycin 125mg orally 4 times daily for 10 days Patients who do not respond to vancomycin may respond to oral fidaxomicin Patients with severe and unremitting colitis should be considered for combination therapy of oral vancomycin and metronidazole. Some cases may require emergency colectomy
52
What is Fasciola hepatica?
common liver fluke (parasitic trematode) Infects humans as part of a plant/ food trematode infection
53
Symptoms of fasciola hepatica?
Acute: fever, nausea, swollen liver, skin rashes, and extreme abdominal pain Chronic: intermittent pain, jaundice, and anemia.
54
Treatment of fasciola hepatica?
triclabendazole. Some patients may need ERCP
55
Classic diphtheria symptoms?
systemic illness that lasts several days. The tonsils or pharynx can be covered in a thick grey membrane which bleeds on attempted removal. Cervical adenopathy Bulls neck appearance
56
What are melanosis coli?
occur as a result of laxative abuse and consists of lipofuschin laden macrophages that appear brown.