databases Flashcards

(12 cards)

1
Q

def of a database

A

a collection of related data
–> data; known facts
–> implicit meaning, suggested/understood without being directly stated
–> assume computerized
–> structured, some degree of interaction
–> built with a perpose

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2
Q

wat is an other word for tables in a DB

A

data types

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3
Q

each table has several; info

A

records

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4
Q

a type is described by several;

A

attributes

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5
Q

one of the attributes can be seen as the main one

A

the key identifier

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6
Q

related data records are linked through:

A

foreign keys

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7
Q

welke DB vallen er onder de NCBI

A

NCBI = national center of biotechnology info
- genbank: all sequences
- refseq: clean, non-redundant seq
- unigene: mRNA
- protein: prot

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8
Q

welke DB vallen er onder EBI

A

EBI = european bioinformatics institute
- EMBL- bank: all seq
- uniprot: prot

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9
Q

welke DB vallen onder NGI

A
  • DDBJ: DNA data bank of japan
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10
Q

wich orgasm specific seq databases

A
  • SGD: Saccharomyces Genome Database
  • TAIR: The Arabidopsis Information Resource
  • FlyBase: fruitvliegje
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11
Q

databases containing a specific type of seq

A
  • Repbase: repeats
  • MiRBase: miRNAs
  • EPD: promotors
  • UniVec: vectors
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12
Q
A
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