Enzyme Catalysis Flashcards
Describe enzyme catalysis
The rate of reaction increases by using an enzyme as a biological catalyst
Describe what is meant by acid-base catalysis
Acceleration of a chemical reaction by the addition of an acid or a base, which is not consumed in the reaction
What is specific base catalysis?
When hydroxide is the attacking species
What is specific acid base catalysis?
When H3O+ is the attacking species
Acid-catalysed reaction has more/less steps than base-catalysed including proton transfers
more
Acid catalysis always begins with a positive/negative charge
positive
What is the action of oxioreductases?
Transfer of electrons
What is the action of transferases?
Group transfer reactions
What is the action of hydrolases?
hydrolysis
What is the action of lyases?
Addition of groups to double bonds
OR
Formation of double bonds by removing groups
What is the action of isomerases?
Transfer of groups within molecules to yield isomeric forms
What is the action of ligases?
Formation of bonds by condensation reactions coupled to ATP cleavage
Enzymes have strongest affinity for the ________ state of the reaction they catalyse
transition
What enzyme family does chymotrypsin belong to?
Serine protease enzymes
Chymotrypsin uses a ______ residue to enhance the nucleophilic ability of serine
histidine
Active sites contain residues that can participate in H+ transfer. List 3 things that may happen to the active site:
- activate nucleophiles required in catalysis
- stabilise charged groups
- Increase electric interactions that may stabilise transition state
Enzymes catalyse reactions by binding with the substrate and transition state. This interaction releases _____, which stabilises the transition state, ______ the activation energy
energy
lowers
What 2 things must enzymes have to increase the number of successful collisions to form E-S complexes?
- close proximity
- correct orientation
An enzyme can be best describes as performing catalysis by:
A lowering the enthalpy of the reaction transition state
B lowering the entropy of the reaction transition state
C lowering the free energy of the reaction transition state
D lowering the internal energy of the reaction transition state
E lowering the heat of the reaction transition state
C lowering the free energy of the reaction transition state
The side-chain of which of the following amino acids is able to act as a nucleophile in an enzyme catalysed reaction? A Alanine B Glycine C Isoleucine D Serine E Valine
D Serine
The side-chain of which of the following amino acids would best be able to mediate proton transfer steps in an enzyme catalysed reaction? A Alanine B Glutamine C Histidine D Leucine E Tryptophan
C Histidine