Exam 1 Flashcards
(550 cards)
What are the three subdisciplines of nutritional genomics?
- Nutrigenetics
- Nutrigenomics
- Nutritional epigenetics
Nutrigenetics refers to:
Functional changes in the nucleic acid code that influences a persons response to nutrients. Variation creates more or less function, may be associated with geographic ancestry
What are some examples of Nutrigenetics?
1.) Newborn screening for high levels of vitality indicating PKU (recessive disorder of phenylalanine hydroxylase gene)
2.) altering folate levels in the diet of a person with MTHFR gene alterations
3.) mutation in the HFE gene hemachromatosis) requiring limited consumption of red meat, animal fat, vitamin C, alcohol
4.) lactose intolerant people (LCT gene)
5.) celiac disease
SNP (single nucleotide polymorphism): necessary or sufficient?
• necessary: required, always present but is not the only requirement for condition
• sufficient: the individual SNP/variant is the actual cause of the condition
An SNP in the CTP-1A gene (carnitine palmitoyl transferase 1A) leads to what?
Difficulty with fatty acid metabolism, not enough fat stores requiring more consistent feeds in newborns
What is nutrigenomics?
Environment – gene interactions that may be managed in order to prevent diet related disease (example: Saccone P450 family and the response to nutrients)
What are some applications of nutrigenomics?
• smoking cessation
• omega-3 fats to reduce gene expression of inflammatory cytokines
What is the technology used in nutrigenomics?
• exome sequencing
• deep sequencing (NGS)
• bioinformatic analysis
What is nutritional epigenetics?
Changes in gene expression that do not involve changes in the nucleotide sequence that can be passed down through generations based off of dietary considerations of the ancestry.
mech: methylation of DNA (cytosines) and acetylation of proteins (histones)
How do we detect acetylation from nutritional epigenetics?
antibody directed against the protein modification
How do we detect methylation in nutritional epigenetics?
Bisulfate treatment converts unmethylated cytosines (but not methylated cytosines) into uracil
What is an epimutation?
The changes that are epigenetic are more readily changed (mutated) they are the genetic base pairs — hongerwinter 1944-1945
What cells make up the intestinal tract?
1.) non-hematopoietic, epithelial (enterocytes, paneth cells, goblet cells)
2.) hemopoietic cells (macrophage, dendritic cell, T cells)
What is a part of the central organization of the immune system?
Blood, spleen, lymph nodes, liver
What is the surface and barrier organization of the immune system?
- skin: cornified epithelium, ducts of exocrine glands
- mucosal: mucins, respiratory tract, gastrointestinal tract, genital tract, eye conjunctiva
What is the primary site for antigen entry into the body?
GALT: gut associated lymphoid tissue, where there is a large reservoir of lymphocytes
Central immune system functions have a tendency toward what cell types and immune reactions?
- Th1 cells (cytotoxic)
- complement mediation (inflammatory)
- IgG, IgM
Surface immune system functions have a tendency toward what?
- Th2 helper cells (humoral)
- agglutination antibodies (reconstruction)
- IGA, IGE
What is the mucosal immune system responsible for?
• immediate identification and elimination of invading cells
• grooming and supporting commensal bacteria
• maintain luminal compartment distinct from body compartment
• cross talk via metabolic products and pattern recognition receptors (TLR, NOD)
• tolerance versus hypersensitivity
What is the metabolic output of the microbiota?
• fatty acids in retina and lens
• bone density
• vascularization of the gut
• bio reactor provides biotin, vitamin K, digestion of complex fiber to generate butyric acid
What are the physical and chemical barriers of the G.I. tract?
• single layer epithelial cells, tight junction
• mucus that covers the epithelial barrier
• peristalsis driving unidirectional movement
• low pH of the stomach (<3)
• detergents, bile acids, lysozymes, defenses, cathelicidin, trefoil proteins
Deficiencies in MUC-2 result in what?
Colitis
Deficiencies in MUC-6 result in what?
H. Pylori, Crohn’s disease
What is the mucous layer in the G.I. tract made of?
Glycocalyx, thickest in the colon with a thick layer attached to the epithelia, and a loose layer in the mucus