Exam 1 Flashcards
(49 cards)
bacterial chemotaxis
directed movement towards more favorable chemical environment or away from an unfavorable environment
temporal sensing
constantly comparing current conditions with those a few seconds/minutes ago
repellents
active RT proteins
CheA phosphorylated
CHeY phosphorylated
motor turns clockwise
tumblign
attractant
inhibit RT proteins
CheA dephosphorylated
CheY dephosphorylated
motor turns counter clockwise
running
3 components to bacterial chemoreception
sensitive response
precise adaptation
large dynamic range
sensitive response:adaptation
receptors from higher order arrays; large arrays act cooperatively (amplify signal)
when one receptor changes conformation, it can induce change in many of its neighbors
1% cange in receptor occupancy can lead to 50% change in rotational bias of flagellum
amplification at individual receptor level
one activated receptor can lead to phosphorylation of multiple CheY proteins
precise adaptation
tumble rate tends to go back to immediate state
allows bacteria to monitor temporal changes in concentration gradient (form of memory)
negative feedback loop
what is beneficial about bacteria’s tend to go back to intermediate state of tumbling?
allows bacteria to change tumble rate to any decreases or increases in chemical concentrations
why is it important for bacteria to monitor temporal changes in concentration gradient?
memory
overcomes inability to sense gradients spatially
how does adaptation occur
through methylation of 4-6 sites on receptor
methylation of 4-6 sites
increases receptor activity (tumbling) even if attractant is bound
CheR
methylates (constitutively active)
CheB
demethylates (active when phosphorylated by CheA)
negative feedback loop of adaptation
conc. inc.
more receptors bind attractant
more receptor inactivated
CheA kinase inactive
tumble suppressed
CheR methylase active / CheB demethylase inactive
receptor methylated
receptor activity increases even though attractant is still bound — more tumbling
negative feedback loop of adaptation
conc. dec.
fewer receptors bind attractant
more receptors in activated conformation
CheA kinase active
tumbles increased
CheR methylase active / CheB demethylase active
receptor demethylated
receptor activity decreases even through little attractant bound == less tumbling
tumble rate reflects…
the change in attractant concentration over time
large dynamic range
diff. between the largest and smallest stimuli which can be reliably reported/detected
bacteria sensory transduction & modality
doesn’t discriminate well between chemical stimuli since they all use same downstream effector (motor)
bacteria intensity
greater instantaneous tumbling rate changes for greater concentration changes
bacteria adaptation
precise and robust adaptation allows for system to detect a large dynamic range and temporal sensing
internal chemoreceptors
PaO2/PaCO2
ECF pH
blood glucose levels
internal receptors
temp, osmotic pressure, body posture
central chemoreceptors
medulla
stim:
inc. PaCO2
dec. pH