Final pharma Flashcards
(213 cards)
what are 3 components of GPCR signal transduction pathways?
GPCR
Heterotrimeric G-protein
Signaling effector
what are the types of the Family A GPCR
- Rhodopsin/ Beta 2 adrenergic receptor like
what are the key distinguishing features of family A GPCR
- DRY ( in the second cytoplasmic group)
- Palmitoylated cysteine (highly conserved)
what is the function of a direct binding assay?
- measures direct interaction of radioactively-tagged ligand with a receptor
- determines kinetic and equilibrium properties
- provides estimates of receptor density
- estimates range of ligand concentration
what do “cold” non radioactive ligand do?
it binds to the receptor and prevents the hot ligand from binding to specific sites
what is the scatchard plot used for?
useful to determine if a single receptor has different affinity states for the same ligand.
what does the indirect binding assay do
Measures the binding affinity of a novel receptor ligand by determining its ability to competitively prevent the binding of a known radioactively-labeled ligand to the receptor
what are the steps of GPCR activation and conformational changes?
Ligand binding alters GPCR conformation
-Altered receptor conformation alters conformation of G-proteins, activating them via GDP-GTP swap
- Activated G-proteins interacts with & activates Effectors by altering their conformation
what is the ligand retinal bound to ?
It is covalently linked to the GPCR
- there is a cis retinal, gets incontact with light, then turns into trans-retinal
- there is a conformation change in rhodopsin
- causing G- protein activation
- vision
what is the ligand retinal bound to ?
It is covalently linked to the GPCR
- there is a cis retinal, gets incontact with light, then turns into trans-retinal
- there is a conformational change in rhodopsin
- causing G- protein activation
- vision
G protein heterotrimers are made of what
3 polypeptides
G alpha, G beta, G gamma
GTP/GDP binds to G alpha
G alpha and G beta are attached to the plasma membrane via lipid anchors
G beta and G gamma what do they do ?
- forms a stable dimer with coiled-coil N- terminal interactions
What does G gamme interact with?
- interacts with G beta, but no G alpha
explain the signaling by GTP- binding? Step by Step
-GDP is off, a signal comes in
- GDP is off, GTP binds
- Then signalling happens, the signal goes out
- GTP hydrolysis happens and GTP is off, losses phosphate and GDP is back on
Explain how G-proteins function as molecular timers?
- it is the duration of time GTP remains unhydrolyzed, and its characteristic for different G alpha subunits
- certtain classes of proteins accelerate G alpha intrinsic rate of GTP hydrolysis
what is the function of RGS proteins?
- modulate the duration of G-protein activation
- control the duration of signaling event
- they can speed up and slow down hydrolysis
- the GTPaase activity and the association and dissociation of GTP/GDP from the G proteins are regualted by a RGSS
what are 4 types of G alpha proteins
- Gs- stimulates adenylyl cyclase
- Gi/o- inhibits adenylyl cyclase and regulates ion channels
Gq/11 activates phospholipase CBeta
G12/13 activated sodium hydrogen pathway
Gs alpha are sensitive to
chloera toxin
Gi/o alpha proteins are sensitive to
pertussis toxin
Cholera toxin function
it has a covalent modification of G alpha prevents GTP hydrolysis
This causes the timer to be on
- G beta gamma and G alpha complex cannot activate adenylyl cyclase
- Cholera toxin ADP ribosylation an arginine residue on GsAlpha g-protein subunit
how does the pertussis toxin function?
- stops the cycle at a different point, thereby preventing signaling
it phosphorylates the inactive state of GDP
there is covalent modification of G alpha, and prevents GDP dissociation
it makes sure effectors cannot be activated
Pertussis toxin (PTX) ADP-ribosylation a cysteine residue (position –4 from carboxyl terminus end) on Gi/o alpha G-protein subunits.
Non-hydrolyzable GTP analogs
Gamma S, is gamma with Sulfur
it prevents the gamma to be removed to make GDP to GTP
what is activated by cAMP
- PKA
C portion of the PKA phosphorylates the substrate
PKA phosphorylates …?
target proteins like CREB