general viro plenary Flashcards
(143 cards)
virus as obligatory cell parasites mean:
they can not survive or multiply in the environment. They need living cells to do that.
Need of specified laboratories in case of/It is also obligatory in case of:
- Regulations or rules, notifiable diseases e.g: FMD, ASF, BSE
- Suspected zoonosis e.g: rabies
- Eradication programs, or in order to control the eradication and declare the free status of the herd (Bovine Lucosis Virus, Infectious Bovine Rhinotrachetitis virus etc.)
- Certifications: free status, SPF herd, transport, competitions
- Clinical signs, pathological findings are not sufficient to establish the diagnosis
- Herd diagnosis: endemic viruses present in the herd
- In the need of official certifications of free status, specified pathogen free (SPF) herd: before exhibitions/animal shows/competitions, transport, export, travel.
Methods of laboratory diagnosis:
- Direct virus demonstration
- Indirect processes (virus serology)
Direct virus demonstration consists of?
- Whole virus (isolation)
* Its components: proteins, Nucleic acids
Indirect processes (virus serology) consists of?
• Antibody detection from the infected animals
Aim of the examination (i.e diagnosis) determines:
- The type of sample
- Its amount
- Shipping
Aspects of the sample collection and transport
- Sample type an timing of sampling
- Unambiguous mark
- Letter of basic information = accompanying letter
- Period and circumstances of the samples shipping to a diagnostic institute
Necessary onformation for documentation for packaging:
- Location and contact information
- Case information
- Epidermiological information
- Submitted samples
Sampling for virological investigation
- Direct method:
Direct method (in early phase): Virus shedding is the highest in this phase!
- Corpse, organ, tissue (cadaver)
- Secretion: ventricle (thorax), organ (udder)
- Blood anticoagulant treated (leucocyte separation)
Sampling for virological investigation
- Indirect method:
Indirect method (generally in late phase)
- Blood coagulated, serum
- Milk, liquor
- Ventricle and organ secretion
Why do you use samples for serological detection of viral pathogens?
In order to be able to see an increase in antibody titres, whereas an increase of min 4 x is considered significant: sera pair investigation
Types of Laboratory investigations:
- Direct virus demonstration
- Indirect virus demonstration
Direct virus demonstration:
The whole virus or its components (proteins, nucleic acids) can be investigated by propagation of viruses in cell culture (virus isolation) or more specific tests such as:
- Antigen test (ELISA, haemagglutination, peroxidase or immne-fluorescence (IF))
- Protein detection (Western blot)
- Nucleic acid detection (i.e Nucleic acid hybridization, PCR)
Indirect virus demonstration:
Serological methods (ELISA, virus neutralization test, indirect IF, haemagglutnination inhibition (HAI)) by which the virus-induced antibodies from the blood or body fluids of the infected animals can be detected.
Virus isolation:
- period of the diagnosis?
2-3 weeks
Virus isolation
- Prerequisite of in vitro propagation?
infective virion –> early phase (acute stadium) –> virus shedding
Virus isolation:
Sample may be taken from?
- Ante-morten: animal alive (buffy coat, body fluids, faeces)
- Post-mortem: animal dead (organ samples)
what type of sample preparation of virus isolation is used in Direct virus demonstration?
Sample preparation in PBS (Ab-Am supplemented) 1:10 dilution
The method of sample preparation in PBS:
(Ab-Am supplemented) 1:10 dilution
- Organ pieces: cutting and homogenization in potter/seramic mortar
- Swabs: rinsing for 1-2 hours
1st centrifugation: cell debris quartz sand (1000 x g, 10min)
2nd centrifugation: purification (300 x g, 10min) or filtration
How is Buffy coat (WBCs) separated from non-coagulated blood?
by haemolytic resistance or buoyant density
Production of primary monolayer cell culture:
- Organ of origin
- Rich in epithelial cells (- virus multiplication)
- Actively dividing cells – from young animal (a few days old)
- Kidney, testicles, thymus, embryo, etc.
- Aseptic removal, processing within a few hours
Production of primary monolayer cell culture:
- Processing in aseptic circumstances
- Removal of outer membranes, connective tissue
- The tissue is cut into small pieces
- Separation of the cells by digestion with trypsin – EDTA (versen) solution
- Cell-containing suspension is repeatedly removed and replaced with trypsin solution
- Blocking the effect of trypsin in ice bed (0C)
- Sedimentation of the cells by centrifugation, removal of trypsin
- Suspension of cells in culturing medium
- Cell couting (in a Bürker chamber)
- The cell suspension is transferred into a sterile culturing flask (Plate, Roux-flask, Petri-dish, etc)
- Incubation (usually at 37 *C, 5% CO2)
What is used for Suspension of cells in culturing medium which gives Optimal environment?
(Production of primary monolayer cell culture)
MEM: Minimal Essential Medium.
- Isotonic, isoionic, isosmotic (salts, buffer systems)
- Nutritive (amino acids, carbohydrates)
- Antibiotics, antimyotics, indicator
- Foetal (neonatal) calf serum (FCS)
What is true for Foetal (neonatal) calf serum (FCS)?
Protein source + mediators for cellular division
Taken from colostrum-free calves
Growth medium: 5-10%
Maintenance medium: 2% FCS