Genetics Flashcards

(38 cards)

1
Q

Errors in translation effect how many proteins?

A

1

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2
Q

Errors in transcription affect how many proteins?

A

affect a subset of proteins translated from the transcript with error

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3
Q

Mutations affect how many proteins?

A

ALL proteins encoded by that gene and ALL descendants of that mutant strain

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4
Q

Where do mutations arise?

A

During replication

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5
Q

What is the primary replicating polymerase?

A

DNA poly III

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6
Q

what are mutagens?

A

environmental factors that damage DNA

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7
Q

Benzopyrene mutagen, what does it do

A

dsDNA intercalating agents disort double helix

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8
Q

methyl-nitrosoguanidine mutagen, what does it do

A

chemical modification of base

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9
Q

UV light mutagen, what does it do?

A

base crosslinking

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10
Q

ionizing radiation mutagen, what does it do

A

base elimination

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11
Q

is a mutation heritable?

A

Yes.

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12
Q

What is a genotype

A

DNA sequence of a gene/chromosome

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13
Q

What is a phenotype

A

measurable/observable trait conferred by a gene, mediated by proteins

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14
Q

What is an allele

A

a version of gene

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15
Q

a random mutation will almost always result in protein what?

A

loss of function

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16
Q

very very rarely a what will arise that increases or changes protein activity

A

gain-of-function

17
Q

Missense mutation

A

single base pair change that changes the codon to a different amino acid

18
Q

nonsense mutation

A

single base pair that changes the codon to a premature stop codon

19
Q

silent mutation

A

changes the codon but codes for the same amino acid due to degeneracy

20
Q

frameshift mutation

A

insertion or deletion of base paris in amounts not divisible by 3. completley alter subsequent amino acid sequence

21
Q

Polarity

A

side effect of mutations within operons

22
Q

Order of how frequent

A
  1. mutagen
  2. slipped strand mispairing
  3. missense loss of function
  4. missense gain of function
23
Q

How does DNA pol III repair a mismatch

A

exonnuclease activity, backs up one base and excises it

24
Q

methyl - directed mismatch repair

A

repairs mismatch pairs

25
MutS
recognizes and binds to DNA distortion
26
MutL
"linker protein" recruits MutH to MutS
27
MutH
endonuclease, nicks DNA near damaged base
28
DNA polymerase I
repair polymerase, loads and fills in gap after methyl-directed mismatch repair
29
how does MutHSL recognize which is damaged strand?
newer strands lack methyl groups, so cut out distortion on un-methylated DNA strand
30
DNA methyltransferase (DNA MTase)
methylates DNA after replication
31
how are mismatches repaired after replication like when a mutagen chemically damages a base?
cell activates SOS system
32
RecA protein
in SOS system, binds to damaged base and becomes activated to RecA*
33
LexA
transcriptional repressor DNA binding protein that inhibits SOS genes
34
RecA*
cleaves LexA and de-represses SOS genes
35
SOS genes (3)
SulA--inhibitor of FtsZ UvrABC- DNA excision repair Pol IV-- error prone polymerase
36
SulA
interacts with FtsZ and blocks z-ring formation until DNA damage has been resolved
37
UvrABC
can excise damaged nucleotides
38
DNA poly IV
copies over the top of damaged nucleotides, prone to error