Genetics Board Stat Pearls Flashcards
(293 cards)
Capillary Malformations/Port Wine Stains
Present at birth
Can have underlying soft tissue or bone hypertrophy (one leg can be bigger than the other)
Can darken, become thick, raised, nodular
GNAQ gene
Familial Venous Malformation Syndrome
TEK gene
Proteus Syndrome
ATK1
Capillary Malformation Artiovenous Malformation Syndrome
RASA1
Werner Syndrome
Normal development until adolescence and then notice signs of accelerated aging
Skin ulcers, cataracts, graying, hypogonadism
50% of malignancies are soft tissue sarcomas, schwannoma, rhabdomyosarcoma, etc
10% have malignancy
Life expectancy is around 40-50 years
PKAN
Pantothenate kinase associated neurodegeneration
Neurocanthocytosis syndrome caused by PKAN2 gene (AR)
Presents in 1st decade, rapid progression (typical)
2nd/3rd decade, slow progression (atypical)
EPS dysfunction, loss of ambulation, eye of the tiger sign on MRI with hypodensities of the globus pallidus
Iron chelators and dopominergic drugs most helpful
Klippel Trenauney
Venous malformations, port wine stains, and/or angiokerotoma circumscriptum
Usually affects single extremity, the leg being the most common for bony and tissue hypertrophy
CLL Prognostic Factors
17p deletion - poor prognosis and advise stem cell transplant especially if patient is young
Trisomy 12 - intermediate prognosis
13q deletion - favorable prognosis
Lynch Syndrome
MSH1/2/6, PMS2
Colorectal adenomas
Endometrial cancer
Less common: gastric, ovarian, urothelial cancer -> usually after endometrial
Apoprotein CII Deficiency
Apoprotein CII deficiency usually involves recurrent acute pancreatitis, demonstrated by increased blood concentration of amylase and lipase.
his disorder is typically diagnosed later in childhood. Chylomicrons and very-low-density lipoprotein (VLDL) levels are elevated in addition to a significant elevation of triglycerides.
Globoid leukodystrophy
Globoid leukodystrophy or Krabbe disease shows autosomal recessive inheritance and has reduced galactosylceramide beta-galactosidase activity.
There are severe myelin loss and white matter globoid bodies. Due to galactocerebrosidase deficiency, psychosine cant is degraded. As a result, there is an accumulation of psychosine, which causes pathologic effects in the central and peripheral nervous system (globoid cell formation and decreased myelin) due to its toxic nature.
There is an early and a late form, both with seizures, psychomotor arrest, and vision loss.
Late infantile-onset Krabbe disease presents between 13 months and 36 months with irritability, abnormal gait, or vision difficulties. Motor milestones are typically reached within the typical age range. As the disease progresses, visual difficulty, apneic episodes, temperature instability, and seizures are more likely. The median age of death is six years.
Polyglandular Autoimmune Syndrome
Polyglandular autoimmune syndrome type 2 is diagnosed by the occurrence of at least 2 out of 3 manifestations, including Addison disease, autoimmune thyroid disease-causing (Graves disease or hypothyroidism), and T1DM.
Other endocrine and non-endocrine manifestations of PAS-2 include primary hypogonadism, myasthenia gravis, celiac disease, alopecia, vitiligo, pernicious anemia, idiopathic heart block, Stiff-man syndrome, Parkinson disease, IgA deficiency, serositis, dermatitis herpetiformis, idiopathic thrombocytopenia, and hypophysitis.
Mutation in HLA-DR3 and HLA-DR4 genes is commonly seen in polyglandular autoimmune syndrome type 2. A mutation in the CD25-interleukin-2 receptor gene, CTLA-4 gene, or protein tyrosine phosphatase can also cause autoimmune polyglandular syndrome type 2.
Cancer Prognosis Factors
Complex karyotype with greater than 5 abnormalities - most important independent of TP53 mutation status
In cases of 3-4 chromosomal abnormalities, prognosis is dependent on TP53 status
Syndrome Associated with Double Aortic Arches
22q11 deletion
DAA presents in early infancy with stridor, dyspnea, FTT, and choking episodes with feeding
Syndrome Associated with Pulmonary Valvular Stenosis and ASDs
Noonan
Fanconi Anemia
ID, microcephaly, renal complications, short radii, hypoplastic thumbs, and anemia; pancytopenia (all three cell lines)
Shortness of breath, chest pain, dizziness, fatiguability are common manifestations of anemia. History of epistaxis, petechiae, unstoppable bleeding from the wound site is common due to thrombocytopenia, and chances of recurrent infections increase with the severity of leukopenia which presents with fever and flu-like illness. History low birth weight is present in some cases and weight loss is important to rule out those cases complicated by cancer. Family history and marriage history are important particularly where the prevalence of the consanguinity marriage system is high.
Defect in homologous recombination of double-stranded DNA is the main mechanism of the pathogenesis of Fanconi anemia.
Various FA proteins maintain genomic stability through DNA interstrand crosslinks (ICLs) repair. ICLs prevent DNA strand separation and maintain DNA integrity. Genetic defects in DNA repair FA pathway so that cells cannot properly repair especially detrimental types of DNA damage.
HSCT treatment if ANC <500, Hgb <8, plts <30,000
Hypokalemic Periodic Paralysis
Hypokalemic periodic paralysis has been linked to a mutation at chromosome 1q32 of the calcium channel and with a mutation at 17q23.1-q25.3 of a sodium channel.
The type 1 hypokalemic periodic paralysis is the most common familial form. There is a mutation in the dihydropyridine-sensitive, skeletal muscle calcium channel gene.
There is autosomal dominant inheritance, but may patients have sporadic disease.
Adolescent onset is most common with precipitating factors, including stress, exercise, carbohydrates, sodium intake, sleep, and alcohol.
12 year old with ataxia, dystonia, and supranuclear gaze palsy
Niemann-Pick disease type C
Niemann-Pick disease type C is caused y a deficiency of enzyme sphingomyelinase, causing a buildup of cholesterol inside cells.
For suspected type C disease, the enzyme activity is measured by taking a skin biopsy and staining it with filipin.
Type A and B mostly present in the first few months of life. Type A is very severe, and the affected children do not live past four years of age. Type B is less severe and has minimal neurological symptoms.
Carney Complex
The patient described above has Carney complex (CNC), given the diagnosis of acromegaly, cardiac myxoma, skin lesions, and thyroid nodule. CNC gene 1 is a germline mutation in a regulatory subunit 1A of protein kinase A (PRKAR1A) located at 17q22-24 observed in about two-thirds of Carney complex patients. Some patients may experience other endocrine problems such as hirsutism due to adrenal tumors.
The syndrome has an autosomal dominant inheritance. It often presents with endocrinopathy, patch skin pigmentation, and neuroendocrine tumors. Primary pigmented adrenocortical disease (PPNAD) is commonly seen in these patients (not primary macronodular adrenal hyperplasia). It is characterized by the small-pigmented nodules less than 10 mm in their greatest diameter most often surrounded by the atrophic cortex.
Myxomas often occur in the left atrium, breast, and skin. The cardiac exam will reveal a loud S1 and a diastolic rumbling murmur. The plopping of the tumor from the left atrium to the left ventricle may also be heard.
Twenty percent to 50% of Carney patients have at least one of the testicular tumors, including large-cell calcifying Sertoli cell tumor (LCCST), nodular adrenocortical rests, and Leydig cell tumors.
Which collagen type causes fatal OI?
Type II
AR or dominant negative
CHARGE
CHARGE syndrome is characterized by coloboma, heart defects, choanal atresia (bilateral), genital abnormalities, and ear abnormalities.
MSUD
Classic maple-syrup urine disease (MSUD) occurs due to reduced branched-chain ketoacid dehydrogenase (BCKAD) activity of 0% to 2% of normal. BCKAD is located within the inner mitochondrial membrane of various tissues such as skeletal muscle, liver, kidney, and the brain.
Clinical constellation of vomiting, lethargy, seizures, abnormal neurological findings and elevated valine, leucine, allo-isoleucine, and isoleucine.
If left untreated, neonates develop irritability, poor feeding, lethargy, opisthotonus, dystonias, central respiratory failure, coma, maple syrup odor of cerumen, neurological complications, and stereotypical movements such as fencing and bicycling.
Branched Chain AAs
The branched-chain amino acids (BCAA) are essential amino acids with hydrophobic side chains and are found in protein-rich food. Their catabolism is necessary to maintain various physiologic functions such as protein synthesis, gluconeogenesis, fatty acid synthesis, cholesterol synthesis, and cellular signaling. In the brain, BCKAD helps metabolize BCAA to facilitate cerebral GABA and glutamate synthesis. The liver and kidney are responsible for the catabolism of 10% to 15% of BCAA. However, unlike most amino acids, the majority of BCAA transamination and oxidation takes place in the skeletal muscle.
McLeod Syndrome
McLeod syndrome is a neuroacanthocytosis syndrome that results from an X-linked recessive inherited mutation in the XK gene
XK protein is expressed in blood, brain, and muscle cells but appears to differ in function among cell types. Loss of XK function leads to abnormal RBC membrane shape due to loss of disulfide bonding with Kell glycoprotein. Neuronal and cardiac involvement is not well understood.
Patients diagnosed with McLeod syndrome are at significantly increased risk of developing congestive or dilated cardiomyopathy and subsequent cardiac arrhythmias (e.g., atrial fibrillation) that can lead to premature death.
ECG or Holter monitor every 2-3 years with appropriate cardiology evaluation and follow-up to prevent morbidity and premature mortality.
Can be a differential when suspecting Huntington disease. It causes atrophy of the caudate nucleus and putamen on CT brain and transfusion reactions. Huntington has significant striatal, putamen, and caudate volume loss, but mostly of the striatum.