gram-negative bacteria Flashcards

(38 cards)

1
Q

what are the main classifications (shapes) of gram-negative bacteria which we look at in clinic?

A
  • rods
  • cocci
  • spirochaetes
  • obligate intracellular bacteria
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2
Q

what are the gram-negative rod family group names?

A

anearobic:
- bacteroridies

aerobic:
- choliform / enterobacteria
- pseudomonas
- vibro
- parvobacteria

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3
Q

what are the gram negative cocci groups?

A

anaerobic:
- veillonella

aerobic:
- neisseria

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4
Q

what are the gram-negative spirochates groups?

A
  • leptospira
  • treponema
  • borrelia
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5
Q

what are the gram-negative obligate intracellular bacteria that we consider?

A
  • rickettsia
  • chlamydia
  • coxiella
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5
Q

outline the characteristics of coliforms / enterobacteria

A

Enterobacteriaceae or Enterobacteria

Rod-shaped
Motile (most)
Peritrichous flagella

Facultatively anaerobic - both aerobic and aerobic

Colonise the intestinal tract
Advantageously or disadvantageously

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6
Q

what tests do we use to distinguish what species the gram-negative bacillus bacteria is?

A

assess phenotypes of different agar:

MacConkey-lactose agar
- lactose fementers turn red eg e.coli, non-lactose fermenters stay yellow eg salmonella
- it turns red because the acid produced by fermentation turns natural red dye in plate red

xylose lysine deoxycholate
- lactose fermenters turn phenol red in media yellow
- isolated salmonella and shingella
- shingella remaind red
- salmonella cannot ferment lactose but redue thiosulphate to produce hydrogen sulphide so appears black

further discrimination between species by serology based on virulence factors

antigen variation

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7
Q

Escherichia coli

A

Principal infections:
- Wound infections (surgical)
- UTIs
- Cystitis
- 75-80% of female UTIs –faecal source or sexual activity
- Catheterisation – most common type of nosocomial infection

  • Gastroenteritis
  • Travellers’ diarrhoea
  • Bacteraemia (potentially sepsis syndrome)
  • Meningitis (infants) – rare in UK
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8
Q

Shigella

A

Four species:
S. dysenteriae - most severe
S. flexneri
S. boydii
S. sonnei - most prevelant

  • Person-to-person
  • contaminated water & food

Shigellosis: severe bloody diarrhoea (bacillary dysentery)

Symptoms and pathology:
- Frequent stools (>30/day) - small volume, pus and blood, prostrating cramps, fever
- Self-limiting (in adults)

Shiga toxin inhibits protein synthesis
Targets kidneys
Also occurs in Shiga-toxin producing EHEC

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9
Q

Salmonella

A

Two species:
S. enterica - responsible for salmonellosis
>2,500 serovars

S. bongori - rare (contact with reptiles)

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10
Q

Infections caused by S. enterica (salmonella)

A

Ingestion of contaminated food/water - high I.D. (~106) (‘faecal-oral route’)

Three forms of salmonellosis caused by S. enterica:
1. Gastroenteritis/enterocolitis (serovars Enteritidis and Typhimurium)
- food poisoning (milk, poultry meat & eggs)
- Second highest no. of food-related hospitalisations/deaths (UK)
- 6-36 hr incubation period, resolves (~7 days)
- Localised infection, inflammation and necrosis of gut mucosa
- Only occasionally systemic
- Does not produce toxins

  1. Enteric fever - typhoid/paratyphoid fever (serovars Typhi and Paratyphi)
    Poor quality drinking water/poor sanitation
    Systemic disease – dissemination of macrophages
    ~20 million cases, ~200,000 deaths/year (globally)
    Produces typhoid toxin (DNase activity = a genotoxin)
  2. Bacteraemia (serovars Cholerasuis and Dublin)
    Uncommon
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11
Q

Other pathogenic Enterobacteria

A

Proteus mirabilis
- catheter-associated UTIs (~30% cases) 
- pyelonephritis
- Produces urease - inc Ca - formation of bladder/kidney stones, catheter blockage

Klebsiella pneumoniae
Environmental
Opportunistic, nosocomial infections (neonates, elderly, compromised)
Colonisation of gastrointestinal tract and oropharynx is benign but can lead to:
UTI
Pneumonia (aspiration from oropharynx)
Surgical wound infections
Bacteraemia  sepsis (high mortality)

Multi-drug resistant (resistant to carbapenems)

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12
Q

name the species of gram-negative - rod - aerobic - choliform.

A
  • salmonella
  • shigella
  • E.coli
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13
Q

name the species of gram-negative - rod - aerobic - pseudomonads.

A

Pseudomonas aeruginosa

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14
Q

Pseudomonas aeruginosa

A

Rod-shaped

Opportunistic (serious cause of nosocomial infections)

Resistant to multiple antibiotics (& disinfectants) - very difficult to treat

Acute infections (due to multiple toxins):
Localised
Burn/surgical wounds

Systemic (bacteraemic  sepsis)
neutropenic patients (leukaemia, chemotherapy, AIDS)

ICU patients - nosocomial pneumonia
Cystic fibrosis (CF) patients

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15
Q

P. aeruginosa and cystic fibrosis

A

CF, most common inherited lethal disorder among Caucasians

Defective CFTR  thick mucus produced in lungs.

Lungs prone to microbial infection.

P. aeruginosa most problematic.
P. aeruginosa ‘wild-type’ (non-mucoid).
P. aeruginosa ‘CF’ phenotype (mucoid)
Isolates that secrete a thick coating of exopolysaccharide: provides additional protection against host defences in the lung

Chronic inflammation leading to progressive lung damage and deterioration of lung function
Occurs following infection of the CF lung by P. aeruginosa
Mainly due to host immune system trying to clear the infection.

16
Q

name the species of gram-negative - rod - aerobic - vibro

A
  • vibrio cholerae
  • Campylobacter
  • Helicobacter pylori
17
Q

Vibrio cholerae

A

Facultative anaerobe
Saline environments: commensal to planktonic crustaceans
Ingestion by shellfish
Contamination of drinking water due to flooding or poor sanitation (faecal contamination) – high infective dose
Incubation, few hours to 5 days (multiplies in small intestine)

Cholera
Most severe diarrhoeal disease
Characterised by pandemics (7 recorded since 1817)
Most in Indian subcontinent
1.4-4.0 million cases/year, 20,000-140,000 associated deaths

Voluminous watery stools (‘secretory’ diarrhoea)

Can lose 20 litres fluid/day plus electrolytes
Dehydration/death (hypovolaemic shock)  50-60% mortality
Non-invasive  no blood, pus or fever (i.e. not dysenteric)
Release of cholera toxin causes pathogenesis

Most cases can be treated with ORT

18
Q

Campylobacter

A

C. jejuni
C. coli

Spiral rods
Unipolar (monotrichous) or bipolar (amphitrichous) flagella

Most common cause of food poisoning in UK & US
Undercooked poultry
Cattle (unpasteurised milk)

Infectious dose 500-800 (low)

Mild to severe diarrhoea, often with blood
Usually self-limiting (≤ 1 week)

Campylobacter shed in faeces for ~3 weeks

19
Q

Helicobacter pylori

A

Spiral shaped
Tuft of polar flagella

Discovered in gastric mucus, 1982 (stomach previously thought to be sterile)

Present in ~50% global population, but only a fraction develop disease

Major role in gastritis and peptic ulcer disease (80-90% of ulcers)

Oncogenic microbe - ~10% cases of gastric adenocarcinoma & mucosa-associated lymphoid tissue lymphoma

Barry Marshall ingested H. pylori → gastritis → Nobel prize 2005

20
Q

name the species in the gram-negative - rod - aerobic - parvobacteria

A
  • Haemophilus influenzae
  • Bordetella pertussis
  • Legionella pneumophila
21
Q

Haemophilus influenzae

A

Exclusively human reservoir
Nasopharyngeal carriage in 25-80% population (non-capsulate strains)
Transient carriage of capsulate strains occurs in 5-10%

Opportunistic infections seen mainly in young children and smokers:
Capsulated – 6 different capsule types (a-f) – rare in adults
Meningitis (age <5 yrs), 5-10% of adult cases  Hi b vaccine reduced incidence
Bacteraemia (often associated with pharyngitis)
Epiglottitis

Non-capsulated  Non-typeable H. influenzae (NTHi) – incidence increasing
Bronchopneumonia
Sinusitis, otitis media
Pneumonia in CF, COPD, HIV patients

Diagnostics
Fastidious
Requires ‘factor X’ (haem) and ‘factor Y’ (NAD)
Cultured on chocolate agar
Non-motile

22
Q

Bordetella pertussis

A

Short (sometimes oval) rods (‘coccobacilli’)
Fastidious
Humans - only known reservoir (obligate human pathogen)

Pertussis (whooping cough)
B. parapertussis causes mild pharyngitis

Highly contagious (low I.D.) - aerosol transmission
Non-specific flu-like symptoms (~7 d), followed by paroxysmal coughing

Non-invasive
Produces two major toxins
Pertussis toxin
CyaA

23
Q

Legionella pneumophila

A

Discovered 1976
Legionnaires’ disease - severe inflammatory pneumonia (1-3% of all pneumonias)
Immunocompromised (elderly, alcoholics, smokers)

Severe (15-20% mortality)
Infection from man-made aquatic environments
Air-conditioning cooling towers, shower heads, nebulisers, humidifiers…

Replicate within freshwater protozoa - intracellular parasite of amoeba

Can survive and replicate within alveolar macrophages
Upregulates pro-inflammatory genes in alveolar macrophages
Excessive influx of neutrophils into lungs → inflammation

24
what species are involved in gram-negative - rod - anaerobic?
bacteriodes
25
Bacteroides
Non-motile rods Strict (obligate) anaerobes Commensal flora (large intestine) - most abundant (30-40% of the total) >1010/g faeces (outnumbers E. coli 20:1) Opportunistic - tissue injury (surgery, perforated appendix or ulcer) Predominantly peritoneal cavity infections (peritonitis, intraabdominal abscesses are most common) can lead to bacteraemia Most frequent cause of anaerobic infections, usually B. fragilis (although it is only 0.5-1.0% of total commensal Bacteroides) Often present in polymicrobial infections with enterobacteria Presence of facultative anaerobes depletes O2, allowing anaerobes such as Bacteroides to proliferate Treatment requires specific anti-anaerobe antibiotics e.g. metronidazole
26
name the gram-negative - cocci - aerobic.
- Neisseria - Neisseria meningitidis - Neisseria gonorrhoeae
27
Neisseria gonorrhoeae
Gonorrhoea - second most common STD worldwide 82.4 million (2020) Cases doubled in the UK last year Person-to-person only Infection can be asymptomatic (~10% men, ~50% women) Usually characterised by urethritis with additional infection of female genitalia Serious complications in women - can lead to salpingitis and/or PID if infection ascends Proctitis, gingivitis, pharyngitis depending on sexual preference Multi-drug resistance arising Non-capsulated
28
Neisseria meningitidis
Nasopharyngeal carriage in 5-10% population (asymptomatic) Person-to-person (aerosol) transmission (universities) Pathogenesis: Low level bacteraemia (asymptomatic) or septicaemia (sepsis) Meningitis: invasion of the meninges - bacteria enter CSF of subarachnoid space Very high mortality from septicaemia if not treated Requires rapid diagnosis! Virulence determinants of N. meningitidis Capsule is major virulence determinant (serogroup B - 90% cases in UK) LPS (membrane ‘blebs’) Cytokine cascade Sepsis
29
Neisseria
Non-flagellated diplococci Fastidious – humans only known reservoir Two species of medical importance: N. meningitidis N. gonorrhoeae
30
name the gram-negative - spirochates.
- Borrelia burgdorferi - Leptospira interrogans - Treponema pallidum
31
Spirochaetes
Long, slender, helical, highly flexible Most are free-living and non-pathogenic Pathogenic varieties difficult to culture Modified outer membrane (“outer sheath”) Treponema and Borrelia lack LPS, replaced by a different glycolipid Endoflagella (‘axial filaments’ = periplasmic flagella) Located between peptidoglycan and outer membrane Fixed at each end of the bacterium and confers shape Overlap in the centre of the bacterium Propels bacterium in a corkscrew motion Swim faster in high viscosity medium “Hides” antigenic flagellum Three medically important genera
32
Borrelia burgdorferi
Lyme disease (zoonosis) (~300 cases in UK) Infects small mammals (rodents) Acquired by tick larvae feeding on infected animal Transmitted to humans by tick nymphs (adults easier to spot!) Bull’s eye rash, flu-like symptoms (fever, fatigue, headache) Dissemination via lymphatics/blood to other organs Neurological problems in 10-15% patients, joints → arthritis Most symptoms arise due to immune response
33
Leptospira interrogans
Leptospirosis (zoonosis) Rare in UK Common infection of rats Systemic infection of the rat, excreted in faeces and urine Proximity of rats to water often means water sources are colonised Rivers, streams country parks, lakes Contact of infected animal urine with mucous membrane or abraded skin Flu-like symptoms Severe form (Weil’s disease) in 10-15% infected individuals 2-4 week incubation period, clinical multi-organ infection occurs Liver infection leads to cell destruction and jaundice Acute renal and hepatic failure Pulmonary distress Haemorrhage
34
Treponema pallidum
Syphilis (STD) 2,800 cases in UK – increasing again Primary stage Localised genital infection (ulcer (“chancre”)) Days-weeks post-infection Highly transmissible phase Secondary stage (~50% cases) Systemic Skin (rash), swollen lymph nodes, joint pains, muscle aches, headache, fever 1-3 months post-infection Still highly transmissible Tertiary stage (~30% cases) ‘Gummas’ (granulomas) in bone and soft tissue Cardiovascular syphilis (aorta) Neurosyphilis (brain and spinal cord) Occurs several years post-infection Non-infectious form
35
gram-negative - obligate intracellular bacteria which are clinically relevant
Chlamydia
36
Chlamydia
Very small, non-motile Obligate intracellular parasites Many species live asymptomatically as endosymbionts in amoebae, invertebrates and vertebrates Cannot culture in bacteriological media - detect by serum Abs or PCR Detects presence of anti-Chlamydia antibodies in serum May be the result of a previous infection Test must not be used to detect a current infection without an alternative confirmatory test Also referred to as NAA (nucleic acid amplification) or NAAT (nucleic acid amplification test)
37
Medically important members of Chlamydia
C. trachomatis (3 biovars): Trachoma biovar (serotypes A-C) → trachoma → blindness Eye-to-eye transmission via hands, fomites or flies Genital tract biovar (serotypes D-K) Most common STD - infects epithelial cells of urethra (both sexes) and vagina Can ascend to uterus and ovaries (PID, infertility) Usually asymptomatic (i.e. 70-80% cases in women) Conjunctivitis (STD), hand-to-eye transmission Lympho granuloma venereum (LGV) biovar (serotypes L1-L3) Causes LGV (an STD) - invasive urogenital or anorectal infection Endemic to the tropics, cases rising in Europe/N. America C. pneumoniae Respiratory tract (mild or “walking” pneumonia) ~10% community acquired pneumonias C. psittaci Mainly birds Psittacosis (zoonotic infection), severe pneumonia