Helix-Coil Transitions in Polymers Flashcards
driving force for protein folding
hydrophobicity, shield hydrophobic parts from the solvent
why are attractive dipole interactions favoures
molecules don’t rotate freely at a finite temp
denaturation due to
temp, solvent, pH or reactions with denaturants
unwinding helix to coil
cooperative transition, polymer becomes increasingly more susceptible to transformational changes once the process has begun
allowed conversion
conversion from h to c allowed if residue adjacent to one undergoing transition is already a c residue
nucleation step
first step, less favourable than the remaining conversions
what does smaller nucleation parameter mean in curve shape
harder to get coil formation started = sharper transition