Imm: Exam III Flashcards
(122 cards)
Topic 9
What are histocompatibility (transplantation) antigens?
antigens on tissues and cells that determine rejection when grafted between genetically different individuals
Topic 9
What are major histocompatibility antigens?
antigens that cause very strong immune response
most important in rejection; encoded by MHC
Topic 9
What is the major histocompatibility complex (MHC)?
Collection of genes arrayed within long continuous stretch of DNA on chromosome 6 in humans, 17 in mice;
presents peptides
Topic 9
MHC class I is expressed on... MHC class II is expressed on...
I: (glycoproteins) expressed on the surface of nearly all nucleated cells
II: only professional antigen presenting cells
Topic 9
What is the structure of MHC class I? What is the structure of MHC class II?
I: alpha chain ( alpha1, alpha2, alpha3 ) and beta2 microglobulin
II: alpha chain ( alpha1-2 ) and beta chain ( beta1-2 )
Topic 9
MHC class I presents peptide antigens to Tc or Th cells? CD8 or CD4?
MHC class II presents peptide antigens to Tc or Th cells? CD8 or CD4?
I: Tc cell ( cytotoxic T cells ) CD8 cells
II: Th cell ( helper T cells ) CD4 cells
Topic 9
____ sends negative signals to natural killer ( NK ) cells
MHC class I
Protects nucleating cells from being killed by them
Topic 9
What is the MHC property of polygeny?
Multiple MHC genes within one individual for some function
Topic 9
What is the MHC property of polymorphism?
multiple varients of the same allele in a population
Topic 9
What is the MHC property of codominant expression?
All loci are always expressed; opposite of B cells
Quiz 5
Which of the following cell types does NOT express MHC class I?
a) hepatocyte
b) dendritic cell
c) erythrocyte
d) lymphocyte
e) neutrophil
c) erythrocyte
because no nucleus
Quiz 5
MHC class II molecules are made up of two polypeptide chains called _______, whose function is to bind peptides and present them to _______ T cells:
a) alpha (α) and beta (β); CD8+
b) alpha (α) and beta (β); γ:δT cells.
c) alpha (α) and beta2-microglobulin (β2m); CD8+
d) alpha (α) and beta (β); CD4+
e) alpha (α) and beta2-microglobulin (β2m); CD4+
d) alpha (α) and beta (β); CD4+
* Note: C would be correct if asking about MHC class I
Quiz 5
The peptide-binding groove of MHC class I molecule is composed of the following extracellular domains:
a) α2: α3
b) α1: β1
c) α1: α2
d) β1: β2
e) α2: β2
c) α1: α2
* Note: B would be correct if asking about MHC class II
Quiz 5
Which of the following describes the sequence of events involved in processing of protein antigens that will be presented as antigenic peptides with MHC class I?
a) endogenous protein → proteasome → TAP 1/2 → endoplasmic reticulum → MHC class I → plasma membrane
b) TAP 1/2 → proteasome → MHC class I → endoplasmic reticulum → plasma membrane →endogenous protein
c) proteasome → TAP 1/2 → MHC class I → endoplasmic reticulum → endogenous protein → plasma membrane
d) plasma membrane → TAP 1/2 → proteasome → MHC class I → endoplasmic reticulum →endogenous protein
e) endoplasmic reticulum → proteasome → endogenous protein→ MHC class I → TAP 1/2 → plasma membrane
a) endogenous protein → proteasome → TAP1/2 → endoplasmic reticulum → MHC class I → plasma membrane
Quiz 5
Human major histocompatibility complex (MHC) genes are NOT….
a) clustered in one region of chromosome #6
b) allelic excluded
c) polygenic
d) co-dominantly expressed
e) highly polymorphic
b) allelic excluded
* When one allele of a gene is expressed while the other allele is silenced
Topic 10
A T cell receptor ( TCR ) has:
- 2 polypeptide chains, ____ and _____
- a _____ (top) and ______ a region (bottom)
- together, this makes the ____
- also has a cytoplasmic tail that reaches through the ____ region into the _____
Bank: cytoplasm, antigen binding site, alpha, variable region (V), constant region (C), beta, transmembrane
A T cell receptor ( TCR ) has:
- 2 polypeptide chains, alpha and beta
- a variable region (V) (top) and a constant region (C) region (bottom)
- together, this makes the antigen binding site
- also has a cytoplasmic tail that reaches through the transmembrane region into the cytoplasm
Topic 10
Similarities between TCRs and BCRs:
- Both are members of _____
- TCR (T cell receptor) resembles the ___ portion of a BCR (B cell receptor)
- The alpha chain: Ig ___ chain
- The beta chain: Ig ___ chain
- TCR V domain resembles Ig ____ and TCR C domain resembles Ig ______
- Interchain disulfide bond: Ig ___
Bank: C domain, light, Ig superfamily, Fab, hinge, heavy, V domain
Similarities between TCRs and BCRs:
- Both are members of Ig superfamily
- TCR resembles the Fab portion of a BCR
- The a chain: Ig light chain
- The b chain: Ig heavy chain
- TCR V domain resembles Ig V domain and C domain to one of the Ig C domains
- Interchain disulfide bond: Ig hinge
Topic 10
Differences Between TCRs and BCRs; in TCRs:
- V-J joining can occur on __ chain due to unique RSS structure
- _____ less stringent for α chain than β chain
- Multiple ___ chains can appear on the same T cell
- No somatic mutation, No ______
- Always ____
- Bind to ____, instead of antigen alone
- α:β T cell receptor and ____ T cell receptor
Bank: β, membrane bound, antigen/ MHC complex, allelic exclusion, α, isotype switching, γ:δ
Differences Between TCRs and BCRs:
- V-J joining can occur on β chain due to unique RSS structure
- Allelic exclusion less stringent for α chain than β chain
- Multiple α chains can appear on the same T cell
- No somatic mutation, No isotype switching
- Always membrane bound
- Bind to antigen/MHC complex, instead of antigen alone
- α:β T cell receptor and γ:δ T cell receptor
Topic 10
Hyperviable Regions (HV) / CDRs:
- CDRs determine TCR’s ____
- TCR’s antigen/ MHC binding site has ____ CDRs
- TCR repertoire is generated by ______
- Creates a ____
Bank: TCR gene rearrangement, binding specificity, 6, loop
For hyperviable Regions (HV) / CDRs:
- CDRs determine TCR’s binding specificity
- TCR’s antigen/ MHC binding site has 6 CDRs
- TCR repertoire is generated by TCR gene rearrangement
- Creates a loop
Topic 10
TCR Diversity:
- Like B cell receptors, TCRs can bind virtually to any existing ____ associated with MHCs
How is diversity generated?
1) Multiple TCR ______
2) Recombination signal sequences (RSS) and ____ recombinase
3) Gene rearrangement follows the same 12/23 (aka _____) rule
4) ______: P- and N-nucleotide additions (TdT)
Bank: peptide antigens, one turn/two turn, gene segments, junctional flexibility, RAG-1/2
TCR Diversity:
- Like B cell receptors, TCRs can bind virtually to any existing peptide antigens associated with MHCs
How is diversity generated?
1) Multiple TCR gene segments
2) Recombination signal sequences (RSS) and RAG-1/2 recombinase
3) Gene rearrangement follows the same 12/23 (aka one turn/two turn) rule
4) Junctional flexibility: P- and N-nucleotide additions (TdT)
* TCR diversity is generated in a similar way as BCRs
Topic 10
Human TCR Gene Loci
- The human T cell receptor gene has an alpha and beta chain locus
- The alpha chain locus has ___, ___, and ___ segments
- The beta chain has ___, ___, ___, and ___ segments (like the ___ chain)
Bank: D, D, C, C, J, J, V, V, light, heavy
Human TCR Gene Loci
- Has an alpha and beta chain locus
- The alpha chain locus has V, J, and C segments
- The beta chain has V, J, C, and D segments (like the light chain)
Topic 10
TCR Gene Rearrangement
- Order of TCR gene rearrangement: _______, _______, ______, (_____), _____
- Alpha chain locus: In order to make functional, any of the ___ segments can join any of the ___ segments
- Beta chain locus: In order to make functional, a _____ is made
Bank: germline DNA, DJC arrangement, T cell receptor protein, recombination, J, (transcription, splicing, translation), V, rearranged DNA
TCR Gene Rearrangement
- Order of TCR gene rearrangement: germline DNA, recombination, rearranged DNA, (transcription, splicing, translation), T cell receptor protein
- Alpha chain locus: In order to make functional, any of the V segments can join any of the J segments
- Beta chain locus: In order to make functional, a DJC arrangement is made
Topic 10
Comparison of TCR
and BCR Diversities
- In the ___ cell receptor, there is more ____: more palindromic nucleotide addition and more junctional diversity
Bank: rearrangement, T, B,
Comparison of TCR
and BCR Diversities
- In the T cell receptor, there is more rearrangement: more palindromic nucleotide addition and more junctional diversity
Topic 10
RSS:
- V-J Joining Is Allowed in TCR ____-chain Locus
(RSS Difference) - The one turn two turn rule makes ____ joining possible
- In the alpha-bata chain, the one turn two turn rule is applicable because a ___ can attach to a ___ ( ___ VJ binding occurs)
- In the k-H chain, the one turn two turn rule is not applicable because a ___ cannot attach to a ____ ( ___ VJ binding occurs)
Bank:
no, yes
J23, J23, V23, V23, J12, J12, V12, V12
V to J, alpha to beta, D to C
alpha, beta
RSS:
- V-J Joining Is Allowed in TCR beta-chain Locus
(RSS Difference) - The one turn two turn rule makes a V to J joining possible
- In the alpha-bata chain, the one turn two turn rule is applicable because a V23 can attach to a J12 (VJ binding occurs)
- In the k-H chain, the one turn two turn rule is not applicable because a V23 cannot attach to a J23 (no VJ binding occurs)