Infectious Disease Flashcards
(117 cards)
Microbiology 101:
What are the four types of microorganisms? And the subtypes within them?
1) Bacteria
a) Gram-positive
b) Gram-negative
c) Other
2) Viruses
3) Fungi
a) Yeasts
b) Moulds
c) Dimorphic
4) Parasites
a) Protozoan
b) Multicellular
What are the two main categories of gram-positive cocci, and name examples?
1) Clusters
- Staph aureus or CNST (coagulase negative STaph)
2) Pairs/chains
- Streptococcus or Enterococcus
What are the three main categories of gram positive bacilli, and name examples?
1) Spore-forming
- Bacillus
- Clostridium
2) Non-spore forming
- Corynebacterium
- Listeria
3) Branching
- Actinomyces
- Norcardia
Name 3 examples of gram negative cocci.
1) Neisseria meningitidis
2) Neisseria gonnorrheae
3) Moraxella
What are the two main categories of gram negative bailli, and name examples?
1) Lactose fermenters
- Klebsiella
- E. coli
- Enterbacter
2) Non-lactose fermenters
- Pseudomonas
- Stenotrophomonas
Name 2 examples of yeast and the type of infection they usually cause.
Yeast
- Candida spp.
- Cryptococcus spp.
Asexual, unicellular organisms
Typically superficial infection, but invasive disease in immunocompromised hosts
Name an example of a Mould.
Aspergillus spp.
Multicellular organisms that have hyphae
Name 3 examples of Dimorphic Fungi.
1) Blastomycosis spp.
2 ) Histoplasmosis spp.
3) Coccidiomycosis spp.
Mould in the cold, yeast in the heat.
Exist as yeast in body temperature, but becomes mould form in room temperature.
High yield antibiotics:
SPICE (HAM) - name the species and treatment (4).
Serrtia
Providencia
Indole-positive Proteus
Citrobacter
Enterobacter
Hafnia
Acinetobacter
Morganella
Rx:
Carbapenem
TMP-SMX
Flurorquinolone (FQ)
Aminoglycoside (AG)
High yield antibiotics:
ESBL - name the species and treatment (4).
E. coli
Klebsiella
Rx:
Carbapenem
TMP-SMX
FQ
AG (if sensitive)
High yield antibiotics:
CPE - name the treatment (3 +/- 2)
Rx:
Colistin
AG
Tigecycline
Call ID (TMP-SMX or FQ if lucky(
High yield antibiotics:
MRSA - name the treatment (7).
Vancomycin
Doxycycline
TMP-SMX
Clindamycin
Linezolid
Daptomycin
Ceftobiprole
High yield antibiotics:
Pseudomonas - name the treatment (10).
Pip/tazo
Ceftazidime
Cefepime
Carbapenems (not Ertapenem)
Ciprofloxacin
AG
Aztreonam
Colistin
Tigecycline
Ceftazidime-Avibactam
Enterococcus - name the treatment (3 +/- 1).
Vanco (not VRE)
Linezolid
Daptomycin
Amp/piperacillin if lucky
Differentiate meningitis vs. encephalitis, based on symptoms and signs.
Meningitis - predominately starts with headache, neck stiffness and fever, and can get altered LOC later into the course
Encephalitis - predominantly starts with altered LOC and fever and can get seizures, focal neurological changes associated
Key guideline for CNS infections:
Tunkel AR, Hartman BJ, Kaplan SL, et al. Practice guidelines for the management
of bacterial meningitis. Clin Infect Dis 2004;39:1267-84.
Does this adult patient have acute meningitis?
Meningitis ruled out (99%) if fever, neck stiffness and altered NS all absent
Joint accentuation - high sensitivity (97% in one study)
Kernig’s and Brudzinski’s signs - high specificity
What are key signs of basal skull meningitis and what are culprit species?
+CN palsies
Long-tract signs
TB
Listeria
Cryptococcus
Syphilis
Lyme
…in the correct host
Bacterial Meningitis:
When to CT and when not to CT?
** I do not understand this question - review at IMR
** I do not understand this question - review at IMR
Meningitis - CSF Parameters
What are the CSF parameters for bacterial, viral, TB and fungal meningitis?
See table
- Differential may be unreliable in recent symptom onset
- Individual CSF predictors for bacterial meningitis each with >99 % certainty
- Glucose < 1.9 mmol/L
- CSF:blood glucose < 0.23
- protein > 2.2 g/L
- WBC > 2000 cells/mL
- PMNs >1180 cells/mL
- CSF biochemistry & cell count minimally affected at 2 days of antibiotics, but culture yield decreased
Meningitis - Pathogens + Rx
For age 18-50 years, what are the common bacterial pathogens and empiric antimicrobial Rx?
For age > 50 years or immunocompromised, what are the common bacterial pathogens and empiric antimicrobial Rx?
Meningitis - Pathogens + Rx CSF Gram Stains
What species is…
a) Gram-positive diplococci
b) Gram-negative diplococci
c) Gram-positive bacilli
a) Gram-positive diplococci = S. pneumoniae
b) Gram-negative diplococci = N. meningitidis
c) Gram-positive bacilli = L. monocytogenes
Meningitis - Pathogens + Rx
For meningitis, what is the duration of treatment for S. pneumoniae, N. meningitidis, and LIsteria monocytogenes?
Meningitis - Steroids
How would you prescribe steroids in meningitis and what species does it reduce mortality/morbidity in?
Dexamethasone 10 mg IV q6h for 4 days PRIOR TO or WITH first dose of antibioitis
- Led to 50% reduction in mortality/morbidity for pneumococcal meningitis
- Two subsequent negative trials
- Cochrane Review (2015): Steroids associated with reduction in mortality for meningitis secondary to Streptococcus pneumoniae (29.9 vs. 36%) and reduction in hearing loss and neurological sequelae for all bacteria
General approach
a) Administer before or with first dose of empiric antibiotics for suspected bacterial meningitis
b) Stop if CSF is non-turbid OR low cell count OR non-pneumococcal by culture
c) Do not start if antibiotics have already been received
Neisseria Meningitis - CHEMOprophylaxis
Who should get it, when and what (3 options)?
(high yield question)
Who:
- Household contacts
- Persons sharing sleeping arrangements
- Persons who have direct nose/mouse contamination with oral/nasal secretions
- Children and staff in childcare or nursery
- HCWs who have had intensive unprotected contact (without wearing a mask) [e.g., intubating, resuscitating, closely examining oropharynx)
- Airline passengers sitting immediately on either side of the case (but not across the aisle) when total time on aircraft is 8 or more hours
When?
- Within 10 days usually
What?
1) Ciprofloxacin 500 mg PO x 1 dose (increasing resistance conern) OR
2) ceftriaxone 250 mg IM x 1 dose OR
3) Rifampin 600 mg PO BID x 2 days